Contig 002565:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF024A05+                   CCCGAGCAGAAGAAGAAAAAGAAGATCAAATTCACCATCCCCATCGCCCCA
rJMFF017I16+                                                          CCCATCGCCCCA
                      ____________________________________________________________
consensus                      CCCGAGCAGAAGAAGAAAAAGAAGATCAAATTCACCATCCCCATCGCCCCA
 
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rJMFF024A05+          GTGGACACGAACCAGAACCAGCCACCACAAGCCATCAGAAAATGCTTGCACTGCGAGATA
rJMFF017I16+          GTGGACACGAACCAGAACCAGCCACCACAAGCCATCAGAAAATGCTTGCACTGCGAGATA
                      ____________________________________________________________
consensus             GTGGACACGAACCAGAACCAGCCACCACAAGCCATCAGAAAATGCTTGCACTGCGAGATA
 
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rJMFF024A05+          ACAAAAACGCCTCAATGGAGGGCCGGTCCAATGGGGCCAAAAACCCTGTGCAATGCCTGT
rJMFF017I16+          ACAAAAACGCCTCAATGGAGGGCCGGTCCAATGGGGCCAAAAACCCTGTGCAATGCCTGT
                      ____________________________________________________________
consensus             ACAAAAACGCCTCAATGGAGGGCCGGTCCAATGGGGCCAAAAACCCTGTGCAATGCCTGT
 
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rJMFF024A05+          GGCGTTCGCTACAAGTCGGGCAGGCTCTTCCCAGAATACCGCCCCGCTGCAAGTCCTACC
rJMFF017I16+          GGCGTTCGCTACAAGTCGGGCAGGCTCTTCCCAGAATACCGCCCCGCTGCAAGTCCTACC
                      ____________________________________________________________
consensus             GGCGTTCGCTACAAGTCGGGCAGGCTCTTCCCAGAATACCGCCCCGCTGCAAGTCCTACC
 
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rJMFF024A05+          TTCACCCCGTCTCTCCACTCCAACTCTCACAAGAAGGTTATCGAGATGAGAAGCAAGGTT
rJMFF017I16+          TTCACCCCGTCTCTCCACTCCAACTCTCACAAGAAGGTTATCGAGATGAGAAGCAAGGTT
                      ____________________________________________________________
consensus             TTCACCCCGTCTCTCCACTCCAACTCTCACAAGAAGGTTATCGAGATGAGAAGCAAGGTT
 
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rJMFF024A05+          GGTGTCGAGAACACTGCAATAACCGAGGCACCATCCACTCCCCAGCCAGCATTCAACAAC
rJMFF017I16+          GGTGTCGAGAACACTGCAATAACCGAGGCACCATCCACTCCCCAGCCAGCATTCAACAAC
                      ____________________________________________________________
consensus             GGTGTCGAGAACACTGCAATAACCGAGGCACCATCCACTCCCCAGCCAGCATTCAACAAC
 
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rJMFF024A05+          CCTTCAGTGGAATTCTAGCAAGAATACACTTGAAAAACCGAAAGGTGCAGAGAATGGTTT
rJMFF017I16+          CCTTCAGTGGAATTCTAGCAAGAATACACTTGAAAAACCGAAAGGTGC--AGAATGGTTT
                      ____________________________________________________________
consensus             CCTTCAGTGGAATTCTAGCAAGAATACACTTGAAAAACCGAAAGGTGCAGAGAATGGTTT
 
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rJMFF024A05+          TCATAGTCAAAAGCTCTCTCTCTGCATTCCTCGATCATACCACAGTTTCAGCAGAGTTAA
rJMFF017I16+          TCATAGTCAAAAGCTCTCTCTCTGCATTCCTCGATCATACCACAGTTTCAGCAGAGTTAA
                      ____________________________________________________________
consensus             TCATAGTCAAAAGCTCTCTCTCTGCATTCCTCGATCATACCACAGTTTCAGCAGAGTTAA
 
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rJMFF024A05+          TGTTATTTGGTTAAGGTTTTCTTCAAACTTTGGTGTCTTTAATTTGTTATTTGGTTCTTT
rJMFF017I16+          TGTTATTTGGTTAAGGTTTTCTTCAAACTTTGGTGTCTTTAATTTGTTATTTGGTTCTTT
                      ____________________________________________________________
consensus             TGTTATTTGGTTAAGGTTTTCTTCAAACTTTGGTGTCTTTAATTTGTTATTTGGTTCTTT
 
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rJMFF024A05+          GTACAAATTTGTAATTGGAGGGAGGGGTTGGAAAGAAGCAATAGATCCATAATATTTTAG
rJMFF017I16+          GTACAAATTTGTAATTGGAGGGAGGGGTTGGAAAGAAGCAATAGATCCATAATATTTTAG
                      ____________________________________________________________
consensus             GTACAAATTTGTAATTGGAGGGAGGGGTTGGAAAGAAGCAATAGATCCATAATATTTTAG
 
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rJMFF024A05+          GTTGTAGGGAAAGAAAAGGAATGAAATGTGAGTTTAGGGGTAGGAGTTAAAAAAGTAGTA
rJMFF017I16+          GTTGTAGGGAAAGAAAAGGAATGAAATGTGAGTTTAGGGGTAGGAGTTAAAAAAGTAGTA
                      ____________________________________________________________
consensus             GTTGTAGGGAAAGAAAAGGAATGAAATGTGAGTTTAGGGGTAGGAGTTAAAAAAGTAGTA
 
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rJMFF024A05+          GTTTGTAGTGTTGGTTAGTTTCTTCAAAGGGTCTGTTGTATGTTTTTCATAGACTTTGTT
rJMFF017I16+          GTTTGTAGTGTTGGTTAGTTTCTTCAAAGGGTCTGTTGTATGTTTTTCATAGACTTTGTT
                      ____________________________________________________________
consensus             GTTTGTAGTGTTGGTTAGTTTCTTCAAAGGGTCTGTTGTATGTTTTTCATAGACTTTGTT
 
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rJMFF024A05+          C                                                           
rJMFF017I16+          CTGTCCCATGTTTTGTGGGAATTCATTTTGCAGTTCATTTGTGGTTTAGGAAATTATGAA
                      ____________________________________________________________
consensus             CTGTCCCATGTTTTGTGGGAATTCATTTTGCAGTTCATTTGTGGTTTAGGAAATTATGAA