Contig 002562:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009D03Sequence545007307 (3)ref|XP_004239332.1|108PREDICTED: uncharacterized protein LOC101267991 [Solanum lycopersicum]750002562 (3)ref|XP_006338180.1|150PREDICTED: uncharacterized protein LOC102600519 [Solanum tuberosum]
JMFF016N10Sequence605007307 (3)ref|XP_004239332.1|148PREDICTED: uncharacterized protein LOC101267991 [Solanum lycopersicum]794002562 (3)ref|XP_006338180.1|171PREDICTED: uncharacterized protein LOC102600519 [Solanum tuberosum]
JMSF012B07Sequence420007307 (3)ref|XP_004239332.1|102PREDICTED: uncharacterized protein LOC101267991 [Solanum lycopersicum]764002562 (3)ref|XP_006338180.1|261PREDICTED: uncharacterized protein LOC102600519 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF016N10+ TATTGACATTTTTG
                      ____________________________________________________________
consensus TATTGACATTTTTG
 
. : . : . : . : . : . :
rJMFF009D03+ ACAAGCAGTGGGACAATATATATGTGGATA
rJMSF012B07+ TGGTCTTTGTCCCAAAGTGCTGATTGTTACAAGCAGTGGGACAATATATATGTGGATA
rJMFF016N10+ TCTGGTCTTTGTCCCAAATTGCTGATTGTTACAAGCAGTGGGACAATATATATGTGGATA
                      ____________________________________________________________
consensus TCTGGTCTTTGTCCCAAATTGCTGATTGTTACAAGCAGTGGGACAATATATATGTGGATA
 
. : . : . : . : . : . :
rJMFF009D03+ ACATCGAAGCAAGTGTTGCTGCCTTGAAAAAGTTGACAGATGAGTGGAGAGTGTTGTCTG
rJMSF012B07+ ACATCGAAGCAAGTGTTGCTGCCTTGAAAAAGTTGACAGATGAGTGGAGAGTGTTGTCTG
rJMFF016N10+ ACATCGAAGCAAGTGTTGCTGCCTTGAAAAAGTTGACAGATGAGTGGAGAGTGTTGTCTG
                      ____________________________________________________________
consensus ACATCGAAGCAAGTGTTGCTGCCTTGAAAAAGTTGACAGATGAGTGGAGAGTGTTGTCTG
 
. : . : . : . : . : . :
rJMFF009D03+ CAAGACAATCTTCTCTTGAAGCTCTGGGTGTAATGCTCAAAAGTTTCAGGCATAAGAATG
rJMSF012B07+ CAAGACAATCTTCTCTTGAAGCTCTGGGTGTAATGCTCAAAAGTTTCAGGCATAAGAATG
rJMFF016N10+ CAAGACAATCTTCTCTTGAAGCTCTGGGTGTAATGCTCAAAAGTTTCAGGCATAAGAATG
                      ____________________________________________________________
consensus CAAGACAATCTTCTCTTGAAGCTCTGGGTGTAATGCTCAAAAGTTTCAGGCATAAGAATG
 
. : . : . : . : . : . :
rJMFF009D03+ AGAAATCCTTAACAAGTGGGATTGACGTTGCTCGCCAATCACTCTTCAAAGATGCTGACA
rJMSF012B07+ AGAAATCCTTAACAAGTGGGATTGACGTTGCTCGCCAATCACTCTTCAAAGATGCTGACA
rJMFF016N10+ AGAAATCCTTAACAAGTGGGATTGACGTTGCTCGCCAATCACTCTTCAAAGATGCTGACA
                      ____________________________________________________________
consensus AGAAATCCTTAACAAGTGGGATTGACGTTGCTCGCCAATCACTCTTCAAAGATGCTGACA
 
. : . : . : . : . : . :
rJMFF009D03+ AATATTGTAAGGTGCTGTTGGGAAGAATATCACGTGGACATGGGTGCCTGAAGAGTTCAG
rJMSF012B07+ AATATTGTAAGGTGCTGTTGGGAAGAATATCACGTGGACATGGGTGCCTGAAGAGTTCAG
rJMFF016N10+ AATATTGTAAGGTGCTGTTGGGAAGAATATCACGTGGACATGGGTGCCTGAAGAGTTCAG
                      ____________________________________________________________
consensus AATATTGTAAGGTGCTGTTGGGAAGAATATCACGTGGACATGGGTGCCTGAAGAGTTCAG
 
. : . : . : . : . : . :
rJMFF009D03+ CCTTCATCATTGCTTTACTTGGTGTTGGAGCAGCTGCCATTTCGCTAAACATAGAGTCAT
rJMSF012B07+ CCTTCATCATTGCTTTACTTGGTGTTGGAGCAGCTGCCATTTCGCTAAACATAGAGTCAT
rJMFF016N10+ CCTTCATCATTGCTTTACTTGGTGTTGGAGCAGCTGCCATTTCGCTAAACATAGAGTCAT
                      ____________________________________________________________
consensus CCTTCATCATTGCTTTACTTGGTGTTGGAGCAGCTGCCATTTCGCTAAACATAGAGTCAT
 
. : . : . : . : . : . :
rJMFF009D03+ GGGATTGGAACAAGTTTTCAGTGTTGTTCAATGTCCAGCAATCCTTATAGGCAGCAAGCG
rJMSF012B07+ GGGATTGGAACAAGTTTTCAGTGTTGTTCAATGTCCAGCAATCCTTATAGGCAGCAAGCG
rJMFF016N10+ GGGATTGGAACAAGTTTTCAGTGTTGTTCAATGTCCAGCAATCCTTATAGGCAGCAAGCG
                      ____________________________________________________________
consensus GGGATTGGAACAAGTTTTCAGTGTTGTTCAATGTCCAGCAATCCTTATAGGCAGCAAGCG
 
. : . : . : . : . : . :
rJMFF009D03+ AATAAAACAGATTAACGTTATACCCCTTCAACGAATCATGAGGCCAAAGTAATCAAAATC
rJMSF012B07+ AATAAAACAGATTAACGTTATACCCCTTCAACGAATCATGAGGCCAAAGTAATCAAAATC
rJMFF016N10+ AATAAAACAGATTAACGTTATACCCCTTCAACGAATCATGAGGCCAAAGTAATCAAAATC
                      ____________________________________________________________
consensus AATAAAACAGATTAACGTTATACCCCTTCAACGAATCATGAGGCCAAAGTAATCAAAATC
 
. : . : . : . : . : . :
rJMFF009D03+ CGTCTGGAATAAATGGGCAGAGAGTGAGTAACTTTATGTAATAGTAGTTCGGTATTTCCA
rJMSF012B07+ CGTCTGGAATAAATGGGCAGAGAGTGAGTAACTTTATGTAATAGTAGTTCGGTATTTCCA
rJMFF016N10+ CGTCTGGAATAAATGGGCAGAGAGTGAGTAACTTTATGTAATAGTAGTTCGGTATTTCCA
                      ____________________________________________________________
consensus CGTCTGGAATAAATGGGCAGAGAGTGAGTAACTTTATGTAATAGTAGTTCGGTATTTCCA
 
. : . : . : . : . : . :
rJMFF009D03+ ATATACTTCAAAGGATTACTGTTTCTGAATCAAAAGGGGACTAACTATGAGCCCCGCCAT
rJMSF012B07+ ATATACTTCAAAGGATTACTGTTTCTGAATCAAAAGGGGACTAACTATGAGCCCCGCC
rJMFF016N10+ ATATACTTCAAAGGATTACTGTTTCTGAATCAAAAGGGGACTAACTATGAGCCCCGCCAT
                      ____________________________________________________________
consensus ATATACTTCAAAGGATTACTGTTTCTGAATCAAAAGGGGACTAACTATGAGCCCCGCCAT
 
. : . : . : . : . : . :
rJMFF009D03+ TTTAACTTTAAAGGGATAGCTTTTTATACTCTACCAAGCCCTCTCCAAATTATCAATACA
rJMFF016N10+ TTTAACTTTAAAGGGATAGCTTTTTATACTCTACCAAGCCCTCTCCAAATTATCAATACA
                      ____________________________________________________________
consensus TTTAACTTTAAAGGGATAGCTTTTTATACTCTACCAAGCCCTCTCCAAATTATCAATACA
 
. : . : . : . : . : . :
rJMFF009D03+ GGGATGGAAATCTACTTTCGAGAGAAAGCTAAAATGACAGGTTTTTATACCCTACCAAGC
rJMFF016N10+ GGGATGGAAATCTACTTTCGAGAGAAAGCTAAAATGACAGGTTTTTATACCCTACCAAGC
                      ____________________________________________________________
consensus GGGATGGAAATCTACTTTCGAGAGAAAGCTAAAATGACAGGTTTTTATACCCTACCAAGC
 
. : . : . : . : . : . :
rJMFF009D03+ TTTCTCATAATGCTAATACAGCTACAGGGATAGAAAACAGACTTCTGAGGGATGTGCTTG
rJMFF016N10+ TTTCTCATAATGCTAATACAGCTACAGGGATAGAAAACAGACTTCTGAGGGATGTGCTTG
                      ____________________________________________________________
consensus TTTCTCATAATGCTAATACAGCTACAGGGATAGAAAACAGACTTCTGAGGGATGTGCTTG