| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009D03 | Sequence | 545 | 007307 (3) | ref|XP_004239332.1| | 108 | PREDICTED: uncharacterized protein LOC101267991 [Solanum lycopersicum] | 750 | 002562 (3) | ref|XP_006338180.1| | 150 | PREDICTED: uncharacterized protein LOC102600519 [Solanum tuberosum] |
| JMFF016N10 | Sequence | 605 | 007307 (3) | ref|XP_004239332.1| | 148 | PREDICTED: uncharacterized protein LOC101267991 [Solanum lycopersicum] | 794 | 002562 (3) | ref|XP_006338180.1| | 171 | PREDICTED: uncharacterized protein LOC102600519 [Solanum tuberosum] |
| JMSF012B07 | Sequence | 420 | 007307 (3) | ref|XP_004239332.1| | 102 | PREDICTED: uncharacterized protein LOC101267991 [Solanum lycopersicum] | 764 | 002562 (3) | ref|XP_006338180.1| | 261 | PREDICTED: uncharacterized protein LOC102600519 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMFF016N10+ TATTGACATTTTTG
____________________________________________________________
consensus TATTGACATTTTTG
. : . : . : . : . : . :
rJMFF009D03+ ACAAGCAGTGGGACAATATATATGTGGATA
rJMSF012B07+ TGGTCTTTGTCCCAAAGTGCTGATTGTTACAAGCAGTGGGACAATATATATGTGGATA
rJMFF016N10+ TCTGGTCTTTGTCCCAAATTGCTGATTGTTACAAGCAGTGGGACAATATATATGTGGATA
____________________________________________________________
consensus TCTGGTCTTTGTCCCAAATTGCTGATTGTTACAAGCAGTGGGACAATATATATGTGGATA
. : . : . : . : . : . :
rJMFF009D03+ ACATCGAAGCAAGTGTTGCTGCCTTGAAAAAGTTGACAGATGAGTGGAGAGTGTTGTCTG
rJMSF012B07+ ACATCGAAGCAAGTGTTGCTGCCTTGAAAAAGTTGACAGATGAGTGGAGAGTGTTGTCTG
rJMFF016N10+ ACATCGAAGCAAGTGTTGCTGCCTTGAAAAAGTTGACAGATGAGTGGAGAGTGTTGTCTG
____________________________________________________________
consensus ACATCGAAGCAAGTGTTGCTGCCTTGAAAAAGTTGACAGATGAGTGGAGAGTGTTGTCTG
. : . : . : . : . : . :
rJMFF009D03+ CAAGACAATCTTCTCTTGAAGCTCTGGGTGTAATGCTCAAAAGTTTCAGGCATAAGAATG
rJMSF012B07+ CAAGACAATCTTCTCTTGAAGCTCTGGGTGTAATGCTCAAAAGTTTCAGGCATAAGAATG
rJMFF016N10+ CAAGACAATCTTCTCTTGAAGCTCTGGGTGTAATGCTCAAAAGTTTCAGGCATAAGAATG
____________________________________________________________
consensus CAAGACAATCTTCTCTTGAAGCTCTGGGTGTAATGCTCAAAAGTTTCAGGCATAAGAATG
. : . : . : . : . : . :
rJMFF009D03+ AGAAATCCTTAACAAGTGGGATTGACGTTGCTCGCCAATCACTCTTCAAAGATGCTGACA
rJMSF012B07+ AGAAATCCTTAACAAGTGGGATTGACGTTGCTCGCCAATCACTCTTCAAAGATGCTGACA
rJMFF016N10+ AGAAATCCTTAACAAGTGGGATTGACGTTGCTCGCCAATCACTCTTCAAAGATGCTGACA
____________________________________________________________
consensus AGAAATCCTTAACAAGTGGGATTGACGTTGCTCGCCAATCACTCTTCAAAGATGCTGACA
. : . : . : . : . : . :
rJMFF009D03+ AATATTGTAAGGTGCTGTTGGGAAGAATATCACGTGGACATGGGTGCCTGAAGAGTTCAG
rJMSF012B07+ AATATTGTAAGGTGCTGTTGGGAAGAATATCACGTGGACATGGGTGCCTGAAGAGTTCAG
rJMFF016N10+ AATATTGTAAGGTGCTGTTGGGAAGAATATCACGTGGACATGGGTGCCTGAAGAGTTCAG
____________________________________________________________
consensus AATATTGTAAGGTGCTGTTGGGAAGAATATCACGTGGACATGGGTGCCTGAAGAGTTCAG
. : . : . : . : . : . :
rJMFF009D03+ CCTTCATCATTGCTTTACTTGGTGTTGGAGCAGCTGCCATTTCGCTAAACATAGAGTCAT
rJMSF012B07+ CCTTCATCATTGCTTTACTTGGTGTTGGAGCAGCTGCCATTTCGCTAAACATAGAGTCAT
rJMFF016N10+ CCTTCATCATTGCTTTACTTGGTGTTGGAGCAGCTGCCATTTCGCTAAACATAGAGTCAT
____________________________________________________________
consensus CCTTCATCATTGCTTTACTTGGTGTTGGAGCAGCTGCCATTTCGCTAAACATAGAGTCAT
. : . : . : . : . : . :
rJMFF009D03+ GGGATTGGAACAAGTTTTCAGTGTTGTTCAATGTCCAGCAATCCTTATAGGCAGCAAGCG
rJMSF012B07+ GGGATTGGAACAAGTTTTCAGTGTTGTTCAATGTCCAGCAATCCTTATAGGCAGCAAGCG
rJMFF016N10+ GGGATTGGAACAAGTTTTCAGTGTTGTTCAATGTCCAGCAATCCTTATAGGCAGCAAGCG
____________________________________________________________
consensus GGGATTGGAACAAGTTTTCAGTGTTGTTCAATGTCCAGCAATCCTTATAGGCAGCAAGCG
. : . : . : . : . : . :
rJMFF009D03+ AATAAAACAGATTAACGTTATACCCCTTCAACGAATCATGAGGCCAAAGTAATCAAAATC
rJMSF012B07+ AATAAAACAGATTAACGTTATACCCCTTCAACGAATCATGAGGCCAAAGTAATCAAAATC
rJMFF016N10+ AATAAAACAGATTAACGTTATACCCCTTCAACGAATCATGAGGCCAAAGTAATCAAAATC
____________________________________________________________
consensus AATAAAACAGATTAACGTTATACCCCTTCAACGAATCATGAGGCCAAAGTAATCAAAATC
. : . : . : . : . : . :
rJMFF009D03+ CGTCTGGAATAAATGGGCAGAGAGTGAGTAACTTTATGTAATAGTAGTTCGGTATTTCCA
rJMSF012B07+ CGTCTGGAATAAATGGGCAGAGAGTGAGTAACTTTATGTAATAGTAGTTCGGTATTTCCA
rJMFF016N10+ CGTCTGGAATAAATGGGCAGAGAGTGAGTAACTTTATGTAATAGTAGTTCGGTATTTCCA
____________________________________________________________
consensus CGTCTGGAATAAATGGGCAGAGAGTGAGTAACTTTATGTAATAGTAGTTCGGTATTTCCA
. : . : . : . : . : . :
rJMFF009D03+ ATATACTTCAAAGGATTACTGTTTCTGAATCAAAAGGGGACTAACTATGAGCCCCGCCAT
rJMSF012B07+ ATATACTTCAAAGGATTACTGTTTCTGAATCAAAAGGGGACTAACTATGAGCCCCGCC
rJMFF016N10+ ATATACTTCAAAGGATTACTGTTTCTGAATCAAAAGGGGACTAACTATGAGCCCCGCCAT
____________________________________________________________
consensus ATATACTTCAAAGGATTACTGTTTCTGAATCAAAAGGGGACTAACTATGAGCCCCGCCAT
. : . : . : . : . : . :
rJMFF009D03+ TTTAACTTTAAAGGGATAGCTTTTTATACTCTACCAAGCCCTCTCCAAATTATCAATACA
rJMFF016N10+ TTTAACTTTAAAGGGATAGCTTTTTATACTCTACCAAGCCCTCTCCAAATTATCAATACA
____________________________________________________________
consensus TTTAACTTTAAAGGGATAGCTTTTTATACTCTACCAAGCCCTCTCCAAATTATCAATACA
. : . : . : . : . : . :
rJMFF009D03+ GGGATGGAAATCTACTTTCGAGAGAAAGCTAAAATGACAGGTTTTTATACCCTACCAAGC
rJMFF016N10+ GGGATGGAAATCTACTTTCGAGAGAAAGCTAAAATGACAGGTTTTTATACCCTACCAAGC
____________________________________________________________
consensus GGGATGGAAATCTACTTTCGAGAGAAAGCTAAAATGACAGGTTTTTATACCCTACCAAGC
. : . : . : . : . : . :
rJMFF009D03+ TTTCTCATAATGCTAATACAGCTACAGGGATAGAAAACAGACTTCTGAGGGATGTGCTTG
rJMFF016N10+ TTTCTCATAATGCTAATACAGCTACAGGGATAGAAAACAGACTTCTGAGGGATGTGCTTG
____________________________________________________________
consensus TTTCTCATAATGCTAATACAGCTACAGGGATAGAAAACAGACTTCTGAGGGATGTGCTTG