| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014J06 | Sequence | 524 | 007669 (10) | ref|XP_009620820.1| | 62.0 | PREDICTED: protein LONGIFOLIA 2-like isoform X1 [Nicotiana tomentosiformis] | 745 | 002554 (4) | ref|XP_009792505.1| | 3e-59 | PREDICTED: protein LONGIFOLIA 1-like [Nicotiana sylvestris] |
| JMFS045A01 | Sequence | 598 | 002554 (4) | ref|XP_009623904.1| | 1e-50 | PREDICTED: protein LONGIFOLIA 2-like [Nicotiana tomentosiformis] | |||||
| JMSF023I17 | Sequence | 661 | 007669 (10) | ref|XP_002527633.1| | 1e-10 | conserved hypothetical protein [Ricinus communis] gb|EEF34772.1| conserved hypot | 736 | 002554 (4) | ref|XP_009792505.1| | 4e-59 | PREDICTED: protein LONGIFOLIA 1-like [Nicotiana sylvestris] |
| JMSF030D22 | Sequence | 547 | 007669 (10) | ref|XP_002527633.1| | 2e-10 | conserved hypothetical protein [Ricinus communis] gb|EEF34772.1| conserved hypot | 745 | 002554 (4) | ref|XP_009623904.1| | 6e-62 | PREDICTED: protein LONGIFOLIA 2-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF030D22+ GTGAGGTCAGCAGTGACNCA
____________________________________________________________
consensus GTGAGGTCAGCAGTGACNCA
. : . : . : . : . : . :
rJMSF030D22+ AGAAACTTCAGTGAGCAAGGTGACACAGCTTCAGTACTATCAGAAAACGACATTAGCATG
____________________________________________________________
consensus AGAAACTTCAGTGAGCAAGGTGACACAGCTTCAGTACTATCAGAAAACGACATTAGCATG
. : . : . : . : . : . :
JMFS045A01- CAGAAATCACAAGCAAATATCAGTATACTGAAATAGGAGGAAAA
rJMSF030D22+ GTGTCATTTATGGACACAGAAATCACAAGCAAATATCAGTATACTGAAATAGGAGGAAAA
____________________________________________________________
consensus GTGTCATTTATGGACACAGAAATCACAAGCAAATATCAGTATACTGAAATAGGAGGAAAA
. : . : . : . : . : . :
JMFS045A01- CAGCGAAGAAACTGTAAAGAGATGGATCCTTCAGTGAGGCTAAGTGAGGATTCACCAAAA
rJMSF030D22+ CAGCGAAGAAACTGTAAAGAGATGGATCCTTCAGTGAGGCTAAGTGAGGATTCACCAAAA
____________________________________________________________
consensus CAGCGAAGAAACTGTAAAGAGATGGATCCTTCAGTGAGGCTAAGTGAGGATTCACCAAAA
. : . : . : . : . : . :
JMFS045A01- GCTGAACTTCAGATTGCCACAATTGAACAACCAAGTCCAGTTTCCGTGCTTGACGCAAAA
rJMSF030D22+ GCTGAACTTCAGATTGCCACAATTGAACAACCAAGTCCAGTTTCCGTGCTTGACGCAAAA
____________________________________________________________
consensus GCTGAACTTCAGATTGCCACAATTGAACAACCAAGTCCAGTTTCCGTGCTTGACGCAAAA
. : . : . : . : . : . :
JMFS045A01- TTTTACATAGAAGATTCACCATCTCCAGTGAAGAAGATATCAACAGCTTTTAGAGATTAT
rJMSF030D22+ TTTTACATAGAAGATTCACCATCTCCAGTGAAGAAGATATCAACAGCTTTTAGAGATTAT
____________________________________________________________
consensus TTTTACATAGAAGATTCACCATCTCCAGTGAAGAAGATATCAACAGCTTTTAGAGATTAT
. : . : . : . : . : . :
JMFS045A01- GATGCTGCTGATGATAATGAAGTAGAATGGCATACACAGGATTTGGACCATTTACCAGTC
rJMSF030D22+ GATGCTGCTGATGATAATGAAGTAGAATGGCATACACAGGATTTGGACCATTTACCAGTC
____________________________________________________________
consensus GATGCTGCTGATGATAATGAAGTAGAATGGCATACACAGGATTTGGACCATTTACCAGTC
. : . : . : . : . : . :
JMFS045A01- AGCACCAGACAAAATCTTGGCTCGGAGTTCAATCATAAGAAATTTGAAACTATTGAGCCC
rJMSF030D22+ AGCACCAGACAAAATCTTGGCTCGGAGTTCAATCATAAGAAATTTGAAACTATTGAGCCC
____________________________________________________________
consensus AGCACCAGACAAAATCTTGGCTCGGAGTTCAATCATAAGAAATTTGAAACTATTGAGCCC
. : . : . : . : . : . :
JMFS045A01- CCAGTTCATAAGCTCAGTCTACTGAACTCTACACCCCAGGAAGATACTGTGAATCAAATA
rJMSF030D22+ CCAGTTCATAAGCTCAGTCTACTGAACTCTACACCCCAGGAAGATACTGTGAATCAAATA
rJMSF023I17+ TCTACACCCCAGGAAGATACTGTGAATCAAATA
rJMFF014J06+ CCAGGAAGATACTGTGAATCAAATA
____________________________________________________________
consensus CCAGTTCATAAGCTCAGTCTACTGAACTCTACACCCCAGGAAGATACTGTGAATCAAATA
. : . : . : . : . : . :
JMFS045A01- GAGTTCTTCTGTCAGAGCGATAATCCTGACCATCAATATGTCAATAAGATACTACTAGCA
rJMSF030D22+ GAGTTCTTCTGTCAGAGCGATAATCCTGACCATCAATATGTCAATAAGATACTACTAGCA
rJMSF023I17+ GAGTTCTTCTGTCAGAGCGATAATCCTGACCATCAATATGTCAATAAGATACTACTAGCA
rJMFF014J06+ GAGTTCTTCTGTCAGAGCGATAATCCTGACCATCAATATGTCAATAAGATACTACTAGCA
____________________________________________________________
consensus GAGTTCTTCTGTCAGAGCGATAATCCTGACCATCAATATGTCAATAAGATACTACTAGCA
. : . : . : . : . : . :
JMFS045A01- TCAGGCCTCCTCCGAGATGTAGATCGTGCCTCAACAACCACTTGCCTTCATCCAACAGGC
rJMSF030D22+ TCAGGCCTCCTCCGAGATGTAGATCGTGCCTCAACAACCACTTGCCTTCATCCAACAGGC
rJMSF023I17+ TCAGGCCTCCTCCGAGATGTAGATCGTGCCTCAACAACCACTTGCCTTCATCCAACAGGC
rJMFF014J06+ TCAGGCCTCCTCCGAGATGTAGATCGTGCCTCAACAACCACTTGCCTTCATCCAACAGGC
____________________________________________________________
consensus TCAGGCCTCCTCCGAGATGTAGATCGTGCCTCAACAACCACTTGCCTTCATCCAACAGGC
. : . : . : . : . : . :
JMFS045A01- CATCTGCTCAACCCCATGTTGTTTGACGTACTAGAACAAACAGAGGAAAGCACCCGACTA
rJMSF030D22+ CATCTGCTCAACCCCATGTTGTTTGACGTACTAGAACAAACAGAGGAAAGCACCCGACTA
rJMSF023I17+ CATCTGCTCAACCCCATGTTGTTTGACGTACTAGAACAAACAGAGGAAAGCACCCGACTA
rJMFF014J06+ CATCTGCTCAACCCCATGTTGTTTGACGTACTAGAACAAACAGAGGAAAGCACCCGACTA
____________________________________________________________
consensus CATCTGCTCAACCCCATGTTGTTTGACGTACTAGAACAAACAGAGGAAAGCACCCGACTA
. : . : . : . : . : . :
JMFS045A01- GCAAATGAAGGATC
rJMSF030D22+ GCAAATGAAGGATCCACAAAAGAGATTTTTCAGTTAAAGTT
rJMSF023I17+ GCAAATGAAGGATCCACAAAAGAGATTTTTCAGTTAAAGTTTGATCAGAGAACTCACAGG
rJMFF014J06+ GCAAATGAAGGATCCACAAAAGAGATTTTTCAGTTAAAGTTTGATCAGAGAACTCACAGG
____________________________________________________________
consensus GCAAATGAAGGATCCACAAAAGAGATTTTTCAGTTAAAGTTTGATCAGAGAACTCACAGG
. : . : . : . : . : . :
rJMSF023I17+ AGAATTGTATTTGATACAGTCAATGAAATTATTGTCCACAAACTATCATCAGAAGGCCTT
rJMFF014J06+ AAAATTGTATTTGATACAGTCAATGAAATTATTGTCCACAAACTATCATCAGAAGGCCTT
____________________________________________________________
consensus AGAATTGTATTTGATACAGTCAATGAAATTATTGTCCACAAACTATCATCAGAAGGCCTT
. : . : . : . : . : . :
rJMSF023I17+ TTAATGCGGGGCAGGGGATGTTTGAGTGGACATCAGTTTCTGAAAGAAGTACATACAGAG
rJMFF014J06+ TTAATGCGGGGCAGGGGATGTTTGAGTGGACATCAGTTTCTGAAAGAAGTACATACAGAG
____________________________________________________________
consensus TTAATGCGGGGCAGGGGATGTTTGAGTGGACATCAGTTTCTGAAAGAAGTACATACAGAG
. : . : . : . : . : . :
rJMSF023I17+ ATGAAGTTTCTCCGGCCTAAATCAGACAGCAGTCTGGACAGTGAGGAAGATGAATTGGAT
rJMFF014J06+ ATGAAGTTTCTCCGGCCTAAATCAGACAGCAGTCTGGACAGTGAGGAAGATGAATTGGAT
____________________________________________________________
consensus ATGAAGTTTCTCCGGCCTAAATCAGACAGCAGTCTGGACAGTGAGGAAGATGAATTGGAT
. : . : . : . : . : . :
rJMSF023I17+ AGCATCTTAAATGTAGATATGAAGCATGAACTGGAGGACTGGGTAGAATCTCGTTGCGAG
rJMFF014J06+ AGCATCTTAAATGTAGATATGAAGCATGAACTGGAGGACTGGGTAGAATCTCGTTGCGAG
____________________________________________________________
consensus AGCATCTTAAATGTAGATATGAAGCATGAACTGGAGGACTGGGTAGAATCTCGTTGCGAG
. : . : . : . : . : . :
rJMSF023I17+ ATTCCAGCATTAGTATTGGACATTGAACGCCTAATCTTTAAGGATCTCATTACTGAGGTA
rJMFF014J06+ ATTCCAGCATTAGTATTGGACATTGAACGCCTAATCTTTAAGGATCTCATTACTGAGGTA
____________________________________________________________
consensus ATTCCAGCATTAGTATTGGACATTGAACGCCTAATCTTTAAGGATCTCATTACTGAGGTA
. : . : . : . : . : . :
rJMSF023I17+ ATTAGTGATGAGGCTGCAGGGCTGCAAGATAGATCAAGGGGGCATTGCAGGCAACTATTT
rJMFF014J06+ ATTAGTGATGAGGCTGCAGGGCTGCAAGATAGATCAAGGGGGCATTGCAGGCAACTATTT
____________________________________________________________
consensus ATTAGTGATGAGGCTGCAGGGCTGCAAGATAGATCAAGGGGGCATTGCAGGCAACTATTT
. : . : . : . : . : . :
rJMSF023I17+ GCAAAATAGTTGCTTCAATGTTCTATTCTTGTTACTCATTGAAACATCCTGTACAATACC
rJMFF014J06+ GCAAAATAGTTGCTTCAATGTTCTATTCTTGTTACTCATTGAAACATCCTGTACAATACC
____________________________________________________________
consensus GCAAAATAGTTGCTTCAATGTTCTATTCTTGTTACTCATTGAAACATCCTGTACAATACC
. : . : . : . : . : . :
rJMSF023I17+ CGTCTTACAGTCAATGCATGAACTGCTAAGAT
rJMFF014J06+ CGTCTTACAGTCAATGCATGAACTGCTAAGATTGTAAAGAGAACCAATTTTCTTCACAAT
____________________________________________________________
consensus CGTCTTACAGTCAATGCATGAACTGCTAAGATTGTAAAGAGAACCAATTTTCTTCACAAT