Contig 002554:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014J06Sequence524007669 (10)ref|XP_009620820.1|62.0PREDICTED: protein LONGIFOLIA 2-like isoform X1 [Nicotiana tomentosiformis]745002554 (4)ref|XP_009792505.1|3e-59PREDICTED: protein LONGIFOLIA 1-like [Nicotiana sylvestris]
JMFS045A01Sequence598002554 (4)ref|XP_009623904.1|1e-50PREDICTED: protein LONGIFOLIA 2-like [Nicotiana tomentosiformis]
JMSF023I17Sequence661007669 (10)ref|XP_002527633.1|1e-10conserved hypothetical protein [Ricinus communis] gb|EEF34772.1| conserved hypot736002554 (4)ref|XP_009792505.1|4e-59PREDICTED: protein LONGIFOLIA 1-like [Nicotiana sylvestris]
JMSF030D22Sequence547007669 (10)ref|XP_002527633.1|2e-10conserved hypothetical protein [Ricinus communis] gb|EEF34772.1| conserved hypot745002554 (4)ref|XP_009623904.1|6e-62PREDICTED: protein LONGIFOLIA 2-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF030D22+ GTGAGGTCAGCAGTGACNCA
                      ____________________________________________________________
consensus GTGAGGTCAGCAGTGACNCA
 
. : . : . : . : . : . :
rJMSF030D22+ AGAAACTTCAGTGAGCAAGGTGACACAGCTTCAGTACTATCAGAAAACGACATTAGCATG
                      ____________________________________________________________
consensus AGAAACTTCAGTGAGCAAGGTGACACAGCTTCAGTACTATCAGAAAACGACATTAGCATG
 
. : . : . : . : . : . :
JMFS045A01- CAGAAATCACAAGCAAATATCAGTATACTGAAATAGGAGGAAAA
rJMSF030D22+ GTGTCATTTATGGACACAGAAATCACAAGCAAATATCAGTATACTGAAATAGGAGGAAAA
                      ____________________________________________________________
consensus GTGTCATTTATGGACACAGAAATCACAAGCAAATATCAGTATACTGAAATAGGAGGAAAA
 
. : . : . : . : . : . :
JMFS045A01- CAGCGAAGAAACTGTAAAGAGATGGATCCTTCAGTGAGGCTAAGTGAGGATTCACCAAAA
rJMSF030D22+ CAGCGAAGAAACTGTAAAGAGATGGATCCTTCAGTGAGGCTAAGTGAGGATTCACCAAAA
                      ____________________________________________________________
consensus CAGCGAAGAAACTGTAAAGAGATGGATCCTTCAGTGAGGCTAAGTGAGGATTCACCAAAA
 
. : . : . : . : . : . :
JMFS045A01- GCTGAACTTCAGATTGCCACAATTGAACAACCAAGTCCAGTTTCCGTGCTTGACGCAAAA
rJMSF030D22+ GCTGAACTTCAGATTGCCACAATTGAACAACCAAGTCCAGTTTCCGTGCTTGACGCAAAA
                      ____________________________________________________________
consensus GCTGAACTTCAGATTGCCACAATTGAACAACCAAGTCCAGTTTCCGTGCTTGACGCAAAA
 
. : . : . : . : . : . :
JMFS045A01- TTTTACATAGAAGATTCACCATCTCCAGTGAAGAAGATATCAACAGCTTTTAGAGATTAT
rJMSF030D22+ TTTTACATAGAAGATTCACCATCTCCAGTGAAGAAGATATCAACAGCTTTTAGAGATTAT
                      ____________________________________________________________
consensus TTTTACATAGAAGATTCACCATCTCCAGTGAAGAAGATATCAACAGCTTTTAGAGATTAT
 
. : . : . : . : . : . :
JMFS045A01- GATGCTGCTGATGATAATGAAGTAGAATGGCATACACAGGATTTGGACCATTTACCAGTC
rJMSF030D22+ GATGCTGCTGATGATAATGAAGTAGAATGGCATACACAGGATTTGGACCATTTACCAGTC
                      ____________________________________________________________
consensus GATGCTGCTGATGATAATGAAGTAGAATGGCATACACAGGATTTGGACCATTTACCAGTC
 
. : . : . : . : . : . :
JMFS045A01- AGCACCAGACAAAATCTTGGCTCGGAGTTCAATCATAAGAAATTTGAAACTATTGAGCCC
rJMSF030D22+ AGCACCAGACAAAATCTTGGCTCGGAGTTCAATCATAAGAAATTTGAAACTATTGAGCCC
                      ____________________________________________________________
consensus AGCACCAGACAAAATCTTGGCTCGGAGTTCAATCATAAGAAATTTGAAACTATTGAGCCC
 
. : . : . : . : . : . :
JMFS045A01- CCAGTTCATAAGCTCAGTCTACTGAACTCTACACCCCAGGAAGATACTGTGAATCAAATA
rJMSF030D22+ CCAGTTCATAAGCTCAGTCTACTGAACTCTACACCCCAGGAAGATACTGTGAATCAAATA
rJMSF023I17+ TCTACACCCCAGGAAGATACTGTGAATCAAATA
rJMFF014J06+ CCAGGAAGATACTGTGAATCAAATA
                      ____________________________________________________________
consensus CCAGTTCATAAGCTCAGTCTACTGAACTCTACACCCCAGGAAGATACTGTGAATCAAATA
 
. : . : . : . : . : . :
JMFS045A01- GAGTTCTTCTGTCAGAGCGATAATCCTGACCATCAATATGTCAATAAGATACTACTAGCA
rJMSF030D22+ GAGTTCTTCTGTCAGAGCGATAATCCTGACCATCAATATGTCAATAAGATACTACTAGCA
rJMSF023I17+ GAGTTCTTCTGTCAGAGCGATAATCCTGACCATCAATATGTCAATAAGATACTACTAGCA
rJMFF014J06+ GAGTTCTTCTGTCAGAGCGATAATCCTGACCATCAATATGTCAATAAGATACTACTAGCA
                      ____________________________________________________________
consensus GAGTTCTTCTGTCAGAGCGATAATCCTGACCATCAATATGTCAATAAGATACTACTAGCA
 
. : . : . : . : . : . :
JMFS045A01- TCAGGCCTCCTCCGAGATGTAGATCGTGCCTCAACAACCACTTGCCTTCATCCAACAGGC
rJMSF030D22+ TCAGGCCTCCTCCGAGATGTAGATCGTGCCTCAACAACCACTTGCCTTCATCCAACAGGC
rJMSF023I17+ TCAGGCCTCCTCCGAGATGTAGATCGTGCCTCAACAACCACTTGCCTTCATCCAACAGGC
rJMFF014J06+ TCAGGCCTCCTCCGAGATGTAGATCGTGCCTCAACAACCACTTGCCTTCATCCAACAGGC
                      ____________________________________________________________
consensus TCAGGCCTCCTCCGAGATGTAGATCGTGCCTCAACAACCACTTGCCTTCATCCAACAGGC
 
. : . : . : . : . : . :
JMFS045A01- CATCTGCTCAACCCCATGTTGTTTGACGTACTAGAACAAACAGAGGAAAGCACCCGACTA
rJMSF030D22+ CATCTGCTCAACCCCATGTTGTTTGACGTACTAGAACAAACAGAGGAAAGCACCCGACTA
rJMSF023I17+ CATCTGCTCAACCCCATGTTGTTTGACGTACTAGAACAAACAGAGGAAAGCACCCGACTA
rJMFF014J06+ CATCTGCTCAACCCCATGTTGTTTGACGTACTAGAACAAACAGAGGAAAGCACCCGACTA
                      ____________________________________________________________
consensus CATCTGCTCAACCCCATGTTGTTTGACGTACTAGAACAAACAGAGGAAAGCACCCGACTA
 
. : . : . : . : . : . :
JMFS045A01- GCAAATGAAGGATC
rJMSF030D22+ GCAAATGAAGGATCCACAAAAGAGATTTTTCAGTTAAAGTT
rJMSF023I17+ GCAAATGAAGGATCCACAAAAGAGATTTTTCAGTTAAAGTTTGATCAGAGAACTCACAGG
rJMFF014J06+ GCAAATGAAGGATCCACAAAAGAGATTTTTCAGTTAAAGTTTGATCAGAGAACTCACAGG
                      ____________________________________________________________
consensus GCAAATGAAGGATCCACAAAAGAGATTTTTCAGTTAAAGTTTGATCAGAGAACTCACAGG
 
. : . : . : . : . : . :
rJMSF023I17+ AGAATTGTATTTGATACAGTCAATGAAATTATTGTCCACAAACTATCATCAGAAGGCCTT
rJMFF014J06+ AAAATTGTATTTGATACAGTCAATGAAATTATTGTCCACAAACTATCATCAGAAGGCCTT
                      ____________________________________________________________
consensus AGAATTGTATTTGATACAGTCAATGAAATTATTGTCCACAAACTATCATCAGAAGGCCTT
 
. : . : . : . : . : . :
rJMSF023I17+ TTAATGCGGGGCAGGGGATGTTTGAGTGGACATCAGTTTCTGAAAGAAGTACATACAGAG
rJMFF014J06+ TTAATGCGGGGCAGGGGATGTTTGAGTGGACATCAGTTTCTGAAAGAAGTACATACAGAG
                      ____________________________________________________________
consensus TTAATGCGGGGCAGGGGATGTTTGAGTGGACATCAGTTTCTGAAAGAAGTACATACAGAG
 
. : . : . : . : . : . :
rJMSF023I17+ ATGAAGTTTCTCCGGCCTAAATCAGACAGCAGTCTGGACAGTGAGGAAGATGAATTGGAT
rJMFF014J06+ ATGAAGTTTCTCCGGCCTAAATCAGACAGCAGTCTGGACAGTGAGGAAGATGAATTGGAT
                      ____________________________________________________________
consensus ATGAAGTTTCTCCGGCCTAAATCAGACAGCAGTCTGGACAGTGAGGAAGATGAATTGGAT
 
. : . : . : . : . : . :
rJMSF023I17+ AGCATCTTAAATGTAGATATGAAGCATGAACTGGAGGACTGGGTAGAATCTCGTTGCGAG
rJMFF014J06+ AGCATCTTAAATGTAGATATGAAGCATGAACTGGAGGACTGGGTAGAATCTCGTTGCGAG
                      ____________________________________________________________
consensus AGCATCTTAAATGTAGATATGAAGCATGAACTGGAGGACTGGGTAGAATCTCGTTGCGAG
 
. : . : . : . : . : . :
rJMSF023I17+ ATTCCAGCATTAGTATTGGACATTGAACGCCTAATCTTTAAGGATCTCATTACTGAGGTA
rJMFF014J06+ ATTCCAGCATTAGTATTGGACATTGAACGCCTAATCTTTAAGGATCTCATTACTGAGGTA
                      ____________________________________________________________
consensus ATTCCAGCATTAGTATTGGACATTGAACGCCTAATCTTTAAGGATCTCATTACTGAGGTA
 
. : . : . : . : . : . :
rJMSF023I17+ ATTAGTGATGAGGCTGCAGGGCTGCAAGATAGATCAAGGGGGCATTGCAGGCAACTATTT
rJMFF014J06+ ATTAGTGATGAGGCTGCAGGGCTGCAAGATAGATCAAGGGGGCATTGCAGGCAACTATTT
                      ____________________________________________________________
consensus ATTAGTGATGAGGCTGCAGGGCTGCAAGATAGATCAAGGGGGCATTGCAGGCAACTATTT
 
. : . : . : . : . : . :
rJMSF023I17+ GCAAAATAGTTGCTTCAATGTTCTATTCTTGTTACTCATTGAAACATCCTGTACAATACC
rJMFF014J06+ GCAAAATAGTTGCTTCAATGTTCTATTCTTGTTACTCATTGAAACATCCTGTACAATACC
                      ____________________________________________________________
consensus GCAAAATAGTTGCTTCAATGTTCTATTCTTGTTACTCATTGAAACATCCTGTACAATACC
 
. : . : . : . : . : . :
rJMSF023I17+ CGTCTTACAGTCAATGCATGAACTGCTAAGAT
rJMFF014J06+ CGTCTTACAGTCAATGCATGAACTGCTAAGATTGTAAAGAGAACCAATTTTCTTCACAAT
                      ____________________________________________________________
consensus CGTCTTACAGTCAATGCATGAACTGCTAAGATTGTAAAGAGAACCAATTTTCTTCACAAT