Contig 002551:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004P20Sequence228002551 (6)gb|KDO35938.1|5e-06hypothetical protein CISIN_1g034856mg [Citrus sinensis]624002551 (6)emb|CDP06557.1|1e-14unnamed protein product [Coffea canephora]
JMFF014I02Sequence488002551 (6)emb|CDP06557.1|6e-15unnamed protein product [Coffea canephora]
JMFN003M11Sequence586002551 (6)emb|CDP06557.1|1e-14unnamed protein product [Coffea canephora]
JMFN009D22Sequence638002551 (6)emb|CDP06557.1|1e-14unnamed protein product [Coffea canephora]
JMFN043K10Sequence617002551 (6)emb|CDP06557.1|1e-14unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN009D22+ CTGATC
                      ____________________________________________________________
consensus CTGATC
 
. : . : . : . : . : . :
JMFN043K10+ AATTATTATGGTGATAAATGCTCCCAACTATAATATTACAAAATAG
JMFN009D22+ CATAGTATGCTTTGAATTATTATGGTGATAAATTGCTCCAACTATAATATTACAAAATAG
JMFN003M11+ TACAAAATAG
rJMFF004P20- CCAACTATAATATTACAAAATAG
                      ____________________________________________________________
consensus CATAGTATGCTTTGAATTATTATGGTGATAAATTGTTCCAACTATAATATTACAAAATAG
 
. : . : . : . : . : . :
JMFN043K10+ ATATTTAGTTCCAACCTCTCCCCAAAACACAACATAAATGTATGGATCTCTGAAACCACA
JMFN009D22+ ATATTTAGTTCCAACCTCTCCCCAAAACACAACATAAATGTATGGATCTCTGAAACCACA
JMFN003M11+ ATATTTAGTTCCAACCTCTCCCCAAAACACAACATAAATGTATGGATCTCTGAAACCACA
rJMFF004P20- ATATTTAGTTCCAACCTCTCCCCAAAACACAACATAAATGTATGGATCTCTGAAACCACA
                      ____________________________________________________________
consensus ATATTTAGTTCCAACCTCTCCCCAAAACACAACATAAATGTATGGATCTCTGAAACCACA
 
. : . : . : . : . : . :
JMFN043K10+ AACTTTGGGTGAGAAGAATTGAAGATGAGAGATGACAAAAAGTATGAAAATTTGTGGAGA
JMFN009D22+ AACTTTGGGTGAGAAGAATTGAAGATGAGAGATGACAAAAAGTATGAAAATTTGTGGAGA
JMFN003M11+ AACTTTGGGTGAGAAGAATTGAAGATGAGAGATGACAAAAAGTATGAAAATTTGTGGAGA
rJMFF004P20- AACTTTGGGTGAGAAGAATTGAAGGTGAGAGATGACAAAAAGTATGAAAATTTGTGGAGA
                      ____________________________________________________________
consensus AACTTTGGGTGAGAAGAATTGAAGATGAGAGATGACAAAAAGTATGAAAATTTGTGGAGA
 
. : . : . : . : . : . :
JMFN043K10+ ATTTAAGGATCCCAGCCAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
JMFN009D22+ ATTTAAGGATCCCAGCCAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
JMFN003M11+ ATTTAAGGATCCCAGACAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
rJMFF004P20- ATTTAAGGATCCCAGCCAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
rJMFF014I02- ATTTAAGGATCCCAGCCAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
                      ____________________________________________________________
consensus ATTTAAGGATCCCAGCCAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
 
. : . : . : . : . : . :
JMFN043K10+ CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
JMFN009D22+ CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
JMFN003M11+ CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
rJMFF004P20- CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
rJMFF014I02- CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
                      ____________________________________________________________
consensus CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
 
. : . : . : . : . : . :
JMFN043K10+ CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
JMFN009D22+ CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
JMFN003M11+ CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
rJMFF004P20- CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
rJMFF014I02- CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
                      ____________________________________________________________
consensus CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
 
. : . : . : . : . : . :
JMFN043K10+ CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
JMFN009D22+ CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
JMFN003M11+ CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
rJMFF004P20- CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
rJMFF014I02- CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
                      ____________________________________________________________
consensus CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
 
. : . : . : . : . : . :
JMFN043K10+ TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
JMFN009D22+ TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
JMFN003M11+ TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
JMFF004P20+ ACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGANAAGCTTC
rJMFF004P20- TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
rJMFF014I02- TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
                      ____________________________________________________________
consensus TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
 
. : . : . : . : . : . :
JMFN043K10+ GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
JMFN009D22+ GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
JMFN003M11+ GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
JMFF004P20+ GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
rJMFF004P20- GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
rJMFF014I02- GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
                      ____________________________________________________________
consensus GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
 
. : . : . : . : . : . :
JMFN043K10+ TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
JMFN009D22+ TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
JMFN003M11+ TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
JMFF004P20+ TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
rJMFF004P20- TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
rJMFF014I02- TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
                      ____________________________________________________________
consensus TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
 
. : . : . : . : . : . :
JMFN043K10+ GATGAAGCCATGTCTCCTTAGCTTGGTTTTG
JMFN009D22+ GATGAAGCCATGTCTCCTTAGCTTGGTTTTGG
JMFN003M11+ GATGAAGCCATGTCTCCTTAGCTTGGTTTTGGAAAA
JMFF004P20+ GATGAAGCCATGTCTCCTTAGCTTGGTTTTGGAAAACCCAACGGGATG
rJMFF004P20- GATGAAGCCATGTCTCCTTAGCTTGGTTTTGGAAAACCCAACGGGATG
rJMFF014I02- GATGAAGCCATGTCTCCTTAGCTTGGTTTTGGAAAACCCAACGGGATGATGATTGAAGCT
                      ____________________________________________________________
consensus GATGAAGCCATGTCTCCTTAGCTTGGTTTTGGAAAACCCAACGGGATGATGATTGAAGCT