Contig 002551:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004P20Sequence228002551 (6)gb|KDO35938.1|5e-06hypothetical protein CISIN_1g034856mg [Citrus sinensis]624002551 (6)emb|CDP06557.1|1e-14unnamed protein product [Coffea canephora]
JMFF014I02Sequence488002551 (6)emb|CDP06557.1|6e-15unnamed protein product [Coffea canephora]
JMFN003M11Sequence586002551 (6)emb|CDP06557.1|1e-14unnamed protein product [Coffea canephora]
JMFN009D22Sequence638002551 (6)emb|CDP06557.1|1e-14unnamed protein product [Coffea canephora]
JMFN043K10Sequence617002551 (6)emb|CDP06557.1|1e-14unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN009D22+                                                                 CTGATC
                      ____________________________________________________________
consensus                                                                   CTGATC
 
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JMFN043K10+                         AATTATTATGGTGATAAATGCTCCCAACTATAATATTACAAAATAG
JMFN009D22+           CATAGTATGCTTTGAATTATTATGGTGATAAATTGCTCCAACTATAATATTACAAAATAG
JMFN003M11+                                                             TACAAAATAG
rJMFF004P20-                                               CCAACTATAATATTACAAAATAG
                      ____________________________________________________________
consensus             CATAGTATGCTTTGAATTATTATGGTGATAAATTGTTCCAACTATAATATTACAAAATAG
 
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JMFN043K10+           ATATTTAGTTCCAACCTCTCCCCAAAACACAACATAAATGTATGGATCTCTGAAACCACA
JMFN009D22+           ATATTTAGTTCCAACCTCTCCCCAAAACACAACATAAATGTATGGATCTCTGAAACCACA
JMFN003M11+           ATATTTAGTTCCAACCTCTCCCCAAAACACAACATAAATGTATGGATCTCTGAAACCACA
rJMFF004P20-          ATATTTAGTTCCAACCTCTCCCCAAAACACAACATAAATGTATGGATCTCTGAAACCACA
                      ____________________________________________________________
consensus             ATATTTAGTTCCAACCTCTCCCCAAAACACAACATAAATGTATGGATCTCTGAAACCACA
 
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JMFN043K10+           AACTTTGGGTGAGAAGAATTGAAGATGAGAGATGACAAAAAGTATGAAAATTTGTGGAGA
JMFN009D22+           AACTTTGGGTGAGAAGAATTGAAGATGAGAGATGACAAAAAGTATGAAAATTTGTGGAGA
JMFN003M11+           AACTTTGGGTGAGAAGAATTGAAGATGAGAGATGACAAAAAGTATGAAAATTTGTGGAGA
rJMFF004P20-          AACTTTGGGTGAGAAGAATTGAAGGTGAGAGATGACAAAAAGTATGAAAATTTGTGGAGA
                      ____________________________________________________________
consensus             AACTTTGGGTGAGAAGAATTGAAGATGAGAGATGACAAAAAGTATGAAAATTTGTGGAGA
 
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JMFN043K10+           ATTTAAGGATCCCAGCCAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
JMFN009D22+           ATTTAAGGATCCCAGCCAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
JMFN003M11+           ATTTAAGGATCCCAGACAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
rJMFF004P20-          ATTTAAGGATCCCAGCCAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
rJMFF014I02-          ATTTAAGGATCCCAGCCAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
                      ____________________________________________________________
consensus             ATTTAAGGATCCCAGCCAGAGAAATCCCTCACATAAAACATACAGGGCAGGGCAGAGTAA
 
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JMFN043K10+           CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
JMFN009D22+           CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
JMFN003M11+           CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
rJMFF004P20-          CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
rJMFF014I02-          CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
                      ____________________________________________________________
consensus             CAAGGCAAGATTTCGATCTATTATATACATCTGCAGATTGGCTGGCACCAAATTAAAAGA
 
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JMFN043K10+           CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
JMFN009D22+           CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
JMFN003M11+           CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
rJMFF004P20-          CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
rJMFF014I02-          CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
                      ____________________________________________________________
consensus             CACCACAAATTAAACTCATGAGACTGTACAAAAATGGATCATTTGAGTTTCCATGGAAGG
 
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JMFN043K10+           CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
JMFN009D22+           CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
JMFN003M11+           CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
rJMFF004P20-          CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
rJMFF014I02-          CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
                      ____________________________________________________________
consensus             CACTGAAGCTTTGAACATGAACCAGACCATGAAACTTTACACCCTTCTTCTCCTCCTCCG
 
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JMFN043K10+           TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
JMFN009D22+           TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
JMFN003M11+           TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
JMFF004P20+                 ACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGANAAGCTTC
rJMFF004P20-          TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
rJMFF014I02-          TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
                      ____________________________________________________________
consensus             TCTGAAACCTCGGCGCCGTCGCAACACTTGCACACCATCCCAAGCGTCGCGAAAAGCTTC
 
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JMFN043K10+           GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
JMFN009D22+           GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
JMFN003M11+           GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
JMFF004P20+           GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
rJMFF004P20-          GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
rJMFF014I02-          GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
                      ____________________________________________________________
consensus             GCATATTTGCTTTCTTGGTTCGCGAGAGAAATCAACGGCCTGGCTTCTGCAAATCTTGAA
 
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JMFN043K10+           TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
JMFN009D22+           TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
JMFN003M11+           TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
JMFF004P20+           TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
rJMFF004P20-          TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
rJMFF014I02-          TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
                      ____________________________________________________________
consensus             TGCTTCTGCGACGAAAGGTGGAGGAGCAGAAGAATGAGAAGAAGATAAGGCCTGGAGGCA
 
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JMFN043K10+           GATGAAGCCATGTCTCCTTAGCTTGGTTTTG                             
JMFN009D22+           GATGAAGCCATGTCTCCTTAGCTTGGTTTTGG                            
JMFN003M11+           GATGAAGCCATGTCTCCTTAGCTTGGTTTTGGAAAA                        
JMFF004P20+           GATGAAGCCATGTCTCCTTAGCTTGGTTTTGGAAAACCCAACGGGATG            
rJMFF004P20-          GATGAAGCCATGTCTCCTTAGCTTGGTTTTGGAAAACCCAACGGGATG            
rJMFF014I02-          GATGAAGCCATGTCTCCTTAGCTTGGTTTTGGAAAACCCAACGGGATGATGATTGAAGCT
                      ____________________________________________________________
consensus             GATGAAGCCATGTCTCCTTAGCTTGGTTTTGGAAAACCCAACGGGATGATGATTGAAGCT