Contig 002549:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014C02Sequence574010316 (2)emb|CDP16941.1|4e-38unnamed protein product [Coffea canephora]397002549 (2)emb|CDP16941.1|1e-63unnamed protein product [Coffea canephora]
JMFF047B04Sequence628010316 (2)ref|XP_009765462.1|114PREDICTED: uncharacterized protein LOC104217006 [Nicotiana sylvestris]557002549 (2)emb|CDP16941.1|1e-110unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF047B04+                                  GTGATGCATACCAAGCCACAGGATGCTACAACTTGC
                      ____________________________________________________________
consensus                                     GTGATGCATACCAAGCCACAGGATGCTACAACTTGC
 
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rJMFF047B04+          TATGCTCAGGCTTTGTTCAAACAAACAATAGGATTGCAATGGGGGCAGCAATATCTCCAA
                      ____________________________________________________________
consensus             TATGCTCAGGCTTTGTTCAAACAAACAATAGGATTGCAATGGGGGCAGCAATATCTCCAA
 
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rJMFF047B04+          GATCATCTTATAATGGCAGGCAATTTGATATTGCCATTATGATCTGGAAGGATCCGAAAC
                      ____________________________________________________________
consensus             GATCATCTTATAATGGCAGGCAATTTGATATTGCCATTATGATCTGGAAGGATCCGAAAC
 
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rJMFF047B04+          ATGGGCATTGGTGGCTGGAATTCGGGCCGGGTATTGTGGTGGGGTACTGGCCATCTTTCT
rJMFF014C02+                                   GCCGGGTATNGTGNTGGGGTACTGGCCATCTTTCT
                      ____________________________________________________________
consensus             ATGGGCATTGGTGGCTGGAATTCGGGCCGGGTATTGTGGTGGGGTACTGGCCATCTTTCT
 
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rJMFF047B04+          TGTTCACCCACCTGAGAAGCCATGCAAGCATGGTGCAGTTTGGAGGAGAGATAGTAAATG
rJMFF014C02+          TGTTCACCCACCTGAGAAGCCATGCAAGCATGGTGCAGTTTGGAGGAGAGATAGTAAATG
                      ____________________________________________________________
consensus             TGTTCACCCACCTGAGAAGCCATGCAAGCATGGTGCAGTTTGGAGGAGAGATAGTAAATG
 
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rJMFF047B04+          AAGGTGGAAGAGGATACCACACTTCAACACAGATGGGGAGTGGGCATTTTGCAGATGAAG
rJMFF014C02+          AAGGTGGAAGAGGATACCACACTTCAACACAGATGGGGAGTGGGCATTTTGCAGATGAAG
                      ____________________________________________________________
consensus             AAGGTGGAAGAGGATACCACACTTCAACACAGATGGGGAGTGGGCATTTTGCAGATGAAG
 
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rJMFF047B04+          GGTTTAGAAAGGCTTCATATTTTAGGAACTTGGAGACTGTTGATTGGGACAATAACTTGA
rJMFF014C02+          GGTTTAGAAAGGCTTCATATTTTAGGAACTTGAAGACTGTTGATTGGGACAATAACTTGA
                      ____________________________________________________________
consensus             GGTTTAGAAAGGCTTCATATTTTAGGAACTTGGAGACTGTTGATTGGGACAATAACTTGA
 
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rJMFF047B04+          TCCCTTTATCTAATCTTCACCTCTTGGCTGACCACCCAACTTGTTACAATATTAGGTCTG
rJMFF014C02+          TCCCTTTATCTAATCTTCACCTCTTGGCTGACCACCCAACTTGTTACAATATTAGGTCTG
                      ____________________________________________________________
consensus             TCCCTTTATCTAATCTTCACCTCTTGGCTGACCACCCAACTTGTTACAATATTAGGTCTG
 
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rJMFF047B04+          GGAGAAATAATGTTTGGGGAAATTATTTTTACTATGGGGGTCCTGGAAGAAACTCTAGGT
rJMFF014C02+          GGAGAAATAATGTTTGGGGAAATTATTTTTACTATGGGGGTCCTGGAAGAAACTCTAGGT
                      ____________________________________________________________
consensus             GGAGAAATAATGTTTGGGGAAATTATTTTTACTATGGGGGTCCTGGAAGAAACTCTAGGT
 
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rJMFF047B04+          GCCCATAATAATAAACTAATGTTTGGGGAAATTATTTTT                     
rJMFF014C02+          GCCCATAATAATAAACTAATGTTTGGGGAAATTATTTTTACAATATCGTATATATCTCAG
                      ____________________________________________________________
consensus             GCCCATAATAATAAACTAATGTTTGGGGAAATTATTTTTACAATATCGTATATATCTCAG