Contig 002543:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012B05Sequence551005921 (2)ref|XP_009619756.1|2e-23PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Nicotiana tomentosiformis]775002543 (2)emb|CDP02593.1|4e-58unnamed protein product [Coffea canephora]
JMFF028N03Sequence436005921 (2)ref|XP_009619756.1|1e-17PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Nicotiana tomentosiformis]755002543 (2)emb|CDP02593.1|1e-57unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF028N03+                                    CAGAGAATGAGAGGCAGGAAAGAGCAAAACCCAG
rJMFF012B05+               GAAGAAGATCCATTTTAATGGCAGAGAATGAGAGGCAGGAAAGAGCAAAACCCAG
                      ____________________________________________________________
consensus                  GAAGAAGATCCATTTTAATGGCAGAGAATGAGAGGCAGGAAAGAGCAAAACCCAG
 
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rJMFF028N03+          AAGCAGAAGCAGAAGGCTTTCCTTGTTTGATTCTTTATTTGCAGATTCAGTTCCGGCTAG
rJMFF012B05+          AAGCAGAAGCAGAAGGCTTTCCTTGTTTGATTCTTTATTTGCAGATTCAGTTCCGGCTAG
                      ____________________________________________________________
consensus             AAGCAGAAGCAGAAGGCTTTCCTTGTTTGATTCTTTATTTGCAGATTCAGTTCCGGCTAG
 
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rJMFF028N03+          GCCATGGCTAATAGCTCCGGCTCAACCCCCCACCGGTTCATCTTCGCCGGCGTTTGCTGC
rJMFF012B05+          GCCATGGNTAATAGCTCCGGCTCAACCCCCCACCGGTTCATCTTCGCCGGCGTTTGCTGC
                      ____________________________________________________________
consensus             GCCATGGCTAATAGCTCCGGCTCAACCCCCCACCGGTTCATCTTCGCCGGCGTTTGCTGC
 
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rJMFF028N03+          AAAAAGCCCTCTCCCTCCACTTATAGGGAGTTTTCCGCCGCCCCCATTGTCTCTTCCAGC
rJMFF012B05+          AAAAAGCCCTCTCCCTCCACTTATAGGGAGTTTTCCGCCGCCCCCATTGTCTCTTCCAGC
                      ____________________________________________________________
consensus             AAAAAGCCCTCTCCCTCCACTTATAGGGAGTTTTCCGCCGCCCCCATTGTCTCTTCCAGC
 
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rJMFF028N03+          TCCCATGTTCAACCCTGCAACTCCGCCGTACGGGCCGCACTTGCCGCCGTGTAAGCCGTC
rJMFF012B05+          TCCCATGTTCAACCCTGCAACTCCGCCGTACGGGCCGCACTTGCCGCCGTGTAAGCCGTC
                      ____________________________________________________________
consensus             TCCCATGTTCAACCCTGCAACTCCGCCGTACGGGCCGCACTTGCCGCCGTGTAAGCCGTC
 
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rJMFF028N03+          CGGGGGCGAAGTCTCTGTGCCGCCGGCGCCTGCGCACGGTGGGCTGTGGTGCGTGGCGAA
rJMFF012B05+          CGGGGGCGAAGTCTCTGTGCCGCCGGCGCCTGCGCACGGTGGGCTGTGGTGCGTGGCGAA
                      ____________________________________________________________
consensus             CGGGGGCGAAGTCTCTGTGCCGCCGGCGCCTGCGCACGGTGGGCTGTGGTGCGTGGCGAA
 
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rJMFF028N03+          GCCCAACGTGCCGCCGGAGACTCTGAAGGAGGCTCTGGACTACGCCTGTGGAGAAGGCGG
rJMFF012B05+          GCCCAACGTGCCGCCGGAGACTCTGAAGGAGGCTCTGGACTACGCCTGTGGAGAAGGCGG
                      ____________________________________________________________
consensus             GCCCAACGTGCCGCCGGAGACTCTGAAGGAGGCTCTGGACTACGCCTGTGGAGAAGGCGG
 
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rJMFF028N03+          CGCGGACTGCCAAGCCATTAGTCCTCACGGCAGCTGCTATTTCCCCGACACCATTGTCGC
rJMFF012B05+          CGCGGACTGCCAAGCCATTAGTCCTCACGGCAGCTGCTATTTCCCCGACACCATTGTCGC
                      ____________________________________________________________
consensus             CGCGGACTGCCAAGCCATTAGTCCTCACGGCAGCTGCTATTTCCCCGACACCATTGTCGC
 
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rJMFF028N03+          CCATGCTTCCTACGCTTTCAACAGCTACTGGCAGAGATCCAAGAAAATTGGCGGCACCTG
rJMFF012B05+          CCATGCTTCCTACGCTTTCAACAGCTACTGGCAGAGATCCAAGAAAATTGGCGGCACCTG
                      ____________________________________________________________
consensus             CCATGCTTCCTACGCTTTCAACAGCTACTGGCAGAGATCCAAGAAAATTGGCGGCACCTG
 
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rJMFF028N03+          TGGCTTTGAAGGCACTGCTATGCTCATCAACTCTGACCCAAGTTATCGCCATTGTCGATT
rJMFF012B05+          TGGCTTTGAAGGCACTGCTATGCTCATCAACTCTGACCCAAGTTATCGCCATTGTCGATT
                      ____________________________________________________________
consensus             TGGCTTTGAAGGCACTGCTATGCTCATCAACTCTGACCCAAGTTATCGCCATTGTCGATT
 
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rJMFF028N03+          CATTCTTGCATAGTGAAGGGAATCTGACATTTTGGTGTGGAACTGAGGATTTGATAATTG
rJMFF012B05+          CATTCTTGCATAGTGAAGGGAATCTGACATTTTGGTGTGGAACTGAGGATTTGATAATTG
                      ____________________________________________________________
consensus             CATTCTTGCATAGTGAAGGGAATCTGACATTTTGGTGTGGAACTGAGGATTTGATAATTG
 
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rJMFF028N03+          AGATCGTCCGGCGGGGAAAAGGTGTATGATTGCCCCACTGTGTGGTATCCTAGTATCGTA
rJMFF012B05+          AGATCGTCCGGCGGGGAAAAGGTGTATGATTGCCCCACTGTGTGGCATCCTAGTATCGTA
                      ____________________________________________________________
consensus             AGATCGTCCGGCGGGGAAAAGGTGTATGATTGCCCCACTGTGTGGTATCCTAGTATCGTA
 
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rJMFF028N03+          GTTGTTAATAAGTAGGACACCTGGGAATTCTATCATATGTATGAATGATGATTCAATTA 
rJMFF012B05+          GTTGTTAATAAGTAGGACACCTGGGAATTCTATCATATGTATGAATGATGATTCAATTAT
                      ____________________________________________________________
consensus             GTTGTTAATAAGTAGGACACCTGGGAATTCTATCATATGTATGAATGATGATTCAATTAT