Contig 002542:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A08Sequence252004500 (3)806002542 (4)ref|XP_011090068.1|56.6PREDICTED: uncharacterized protein LOC105170843 [Sesamum indicum]
JMSF001K17Sequence211004500 (3)734002542 (4)ref|XP_011090068.1|55.1PREDICTED: uncharacterized protein LOC105170843 [Sesamum indicum]
JMSF008A19Sequence582002542 (4)
JMSF030D08Sequence245004500 (3)729002542 (4)ref|XP_011090068.1|55.1PREDICTED: uncharacterized protein LOC105170843 [Sesamum indicum]

Alignment

This contig is upended


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rJMFF012A08+                                            AGTTTTGCCAAGGCTATACTTTGAGT
                      ____________________________________________________________
consensus                                               AGTTTTGCCAAGGCTATACTTTGAGT
 
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rJMSF030D08+                                     CAAAACAATGAATTATTGCTCAGTGACCAACAA
rJMSF001K17+                                     CAAAACAATGAATTATTGCTCAGTGACCAACAA
rJMFF012A08+          GTAGCAGGGATATCCCCATTTTGGTTCCAAAACAATGAATTATTGCTCAGTGACCAACAA
                      ____________________________________________________________
consensus             GTAGCAGGGATATCCCCATTTTGGTTCCAAAACAATGAATTATTGCTCAGTGACCAACAA
 
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rJMSF030D08+          AGCATGCCACCTGTGTTTGTAGGATCTATGCTTTACTCTGCTGAGAATGCTATGCCATCC
rJMSF001K17+          AGCATGCCACCTGTGTTTGTAGGATCTATGCTTTACTCTGCTGAGAATGCTATGCCATCC
rJMFF012A08+          AGCATGTCACCTGTGTTTGTAGGATCTATGCTTTACTCTGCTGAGAATGCTATGCCATCC
                      ____________________________________________________________
consensus             AGCATGCCACCTGTGTTTGTAGGATCTATGCTTTACTCTGCTGAGAATGCTATGCCATCC
 
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rJMSF008A19+                                                          ACTTTCATTCCA
rJMSF030D08+          ACTGCTACGTACAATTTTGAAGAGAGATCGAAAGTGCGTGGGACTGGAACTTTCATTCCA
rJMSF001K17+          ACTGCTACGTACAATTTTGAAGAGAGATCGAAAGTGCGTGGGACTGGAACTTTCATTCCA
rJMFF012A08+          ACTGCTACGTACAATTTTGAAGAGAGATCGAAAGTGCGTGGGACTGGAACTTTCATTCCA
                      ____________________________________________________________
consensus             ACTGCTACGTACAATTTTGAAGAGAGATCGAAAGTGCGTGGGACTGGAACTTTCATTCCA
 
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rJMSF008A19+          ACCATGGTTAACACTTACAGGGATGACAGAGCATTGAGAGGAAAGGGGAAAAACAGGGCT
rJMSF030D08+          ACCATGGTTAACACTTACAGGGATGACAGAGCATTGAGAGGAAAGGGGAAAAACAGGGCT
rJMSF001K17+          ACCATGGTTAACACTTACAGGGATGACAGAGCATTGAGAGGAAAGGGGAAAAACAGGGCT
rJMFF012A08+          ACCATGGTTAACACTTACAGGGATGACAGAGCATTGAGAGGAAAGGGGAAAAACAGGGCT
                      ____________________________________________________________
consensus             ACCATGGTTAACACTTACAGGGATGACAGAGCATTGAGAGGAAAGGGGAAAAACAGGGCT
 
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rJMSF008A19+          TTTGGGGGCCATGGNGTGCACCACCGAAGCACTTCTAGCAGAGGATGGGCTCCTGCATTG
rJMSF030D08+          TTTGGGGGCCATGGTGTGCACCACCGAAGCACTTCTAGCAGAGGATGGGCTCCTGCATTG
rJMSF001K17+          TTTGGGGGCCATGGTGTGCACCACCGAAGCACTTCTAGCAGAGGATGGGCTCCTGCATTG
rJMFF012A08+          TTTGGGGGCCATGGTGTGCACCACCGAAGCACTTCTAGCAGAGGATGGGCTCCTGCATTG
                      ____________________________________________________________
consensus             TTTGGGGGCCATGGTGTGCACCACCGAAGCACTTCTAGCAGAGGATGGGCTCCTGCATTG
 
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rJMSF008A19+          CCCCCCAAGGATAGTGCTTCTGAAAACAGTAGCAGAGAGAGTTCACATGCATGGCCTGCA
rJMSF030D08+          CCCCCCAAGGATAGTGCTTCTGAAAACAGTAGCAGAGAGGGTTCACATGCATGGCCTGCA
rJMSF001K17+          CCCCCCAAGGATAGTGCTTCTGAAAACAGTAGCAGAGAGGGTTCACATGCATGGCCTGCA
rJMFF012A08+          CCCCCCAAGGATAGTGCTTCTGAAAACAGTAGCAGAGAGGGTTCACATGCATGGCCTGCA
                      ____________________________________________________________
consensus             CCCCCCAAGGATAGTGCTTCTGAAAACAGTAGCAGAGAGGGTTCACATGCATGGCCTGCA
 
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rJMSF008A19+          GCAGCTCAAGAGCGCGGGAAATCTTCTGGATTCAGGCCATCTCATCATTCAGCTGGAGAT
rJMSF030D08+          GCAGCTCAAGAGCGCGGGAAATCTTCTGGATTCAGGCCATCTCATCATTCAGCTGGAGAT
rJMSF001K17+          GCAGCTCAAGAGCGCGGGAAATCTTCTGGATTCAGGCCATCTCATCATTCAGCTGGAGAT
rJMFF012A08+          GCAGCTCAAGAGCGCGGGAAATCTTCTGGATTCAGGCCATCTCATCATTCAGCTGGAGAT
                      ____________________________________________________________
consensus             GCAGCTCAAGAGCGCGGGAAATCTTCTGGATTCAGGCCATCTCATCATTCAGCTGGAGAT
 
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rJMSF008A19+          TCTCGNGTCGGTGAATTTGGATATGCGAGGCAATATCCCGAGGGTGGCTCATATCAGGAA
rJMSF030D08+          TCTCGTGTCGGTGAATTTGGATATGCGAGGCAATATCCCGAGGGTGGTTCATATCAGGAA
rJMSF001K17+          TCTCGTGTCGGTGAATTTGGATATGCGAGGCAATATCCCGAGGGTGGCTCATATCAGGAA
rJMFF012A08+          TCTCGTGTCGGTGAATTTGGATATGCGAGGCAATATCCCGAGGGTGGCTCATATCAGGAA
                      ____________________________________________________________
consensus             TCTCGTGTCGGTGAATTTGGATATGCGAGGCAATATCCCGAGGGTGGCTCATATCAGGAA
 
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rJMSF008A19+          AGGGCCACAACGAGATTCTCCCAGAGAGTGCCCTGTGCAAAACCTGTTTGGGGCAGAAAA
rJMSF030D08+          AGGGCCACAACGAGATTCTCCCAGAGAGTGCCCTGTGCAAAACCTGTTTGGGGCAGAAAA
rJMSF001K17+          AGGGCCACAACGAGATTCTCCCAGAGAGTGCCCTGTGCAAAACCTGTTTGGGGCAGAAAA
rJMFF012A08+          AGGGCCACAACGAGATTCTCCCATAGAGTGCCCTGTGCAAAACCTGTTTGGGGCAGAAAA
                      ____________________________________________________________
consensus             AGGGCCACAACGAGATTCTCCCAGAGAGTGCCCTGTGCAAAACCTGTTTGGGGCAGAAAA
 
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rJMSF008A19+          GATAGGCTTGCAGATCAATCGTTGGCCCCCGAAGAATGATGAGTGTTTCTTCCCCCCCTT
rJMSF030D08+          GATAGGCTTGCAGATCAATCGTTGGCCCCCGAAGAATGATGAGTGTTTCTTCCCCCCCTT
rJMSF001K17+          GATAGGCTTGCAGATCAATCGTTGGCCCCCGAAGAATGATGAGTGTTTCTTCCCCCCCTT
rJMFF012A08+          GATAGGCTTGCAGATCAATCGTTGGCCCCCGAAGAATGATGAGTGTTTCTTCCCCCCCTT
                      ____________________________________________________________
consensus             GATAGGCTTGCAGATCAATCGTTGGCCCCCGAAGAATGATGAGTGTTTCTTCCCCCCCTT
 
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rJMSF008A19+          GGCCTCTTTTGCATGTGAAGGGAAACTGTAGGTGCTAACTGAAGTGTAGAGATGGTATAG
rJMSF030D08+          GGCCTCTTTTGCATGTGAAGGGAAACTGTAGGTGCTAACTGAAGTGTAGAGATGGTATAG
rJMSF001K17+          GGCCTCTTTTGCATGTGAAGGGAAACTGTAGGTGCTAACTGAAGTGTAGAGATGGTATAG
rJMFF012A08+          GGCCTCTTTTGCATGTGAAGGGAAACTGTAGGTGCTAACTGAAGTGTAGAGATGGTATAG
                      ____________________________________________________________
consensus             GGCCTCTTTTGCATGTGAAGGGAAACTGTAGGTGCTAACTGAAGTGTAGAGATGGTATAG
 
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rJMSF008A19+          GTGACTGACTTTTTCCCTTTTCCCTTTGTTAGTTGTTTTTGGCTGGTGAGGAATGTTTGT
rJMSF030D08+          GTGACTGACTTTTTCCCTTTTCCCTTTGTTAGTTGTTTTTGGCTGGTGAGGAATGTTTGT
rJMSF001K17+          GTGACTGACTTTTTCCCTTTTCCCTTTGTTAGTTGTTTTTGGCTGGTGAGGAATGTTTGT
rJMFF012A08+          GTGACTGACTTTTTCCCTTTTCCCTTTGTTAGTTGTTTTTGGCTGGTGAGGAATGTTTGT
                      ____________________________________________________________
consensus             GTGACTGACTTTTTCCCTTTTCCCTTTGTTAGTTGTTTTTGGCTGGTGAGGAATGTTTGT
 
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rJMSF008A19+          AA                                                          
rJMSF030D08+          AA                                                          
rJMSF001K17+          AACAATGTTGGATGTTT                                           
rJMFF012A08+          AACAATGTTGGATGTTTTCTCCCCCCTTGGCCCTTGCCTTGTATCAAANGAAAAAGAAAA
                      ____________________________________________________________
consensus             AACAATGTTGGATGTTTTCTCCCCCCTTGGCCCTTGCCTTGTATCAAANGAAAAAGAAAA