Contig 002541:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011G22Sequence572001607 (9)gb|EYU23114.1|2e-95hypothetical protein MIMGU_mgv1a004585mg [Erythranthe guttata]743002541 (10)dbj|BAF95167.1|8e-38similar to putative preRNA processing ribonucleoprotein [Ipomoea nil]
JMFF011M08Sequence541001607 (9)gb|EYU23115.1|5e-77hypothetical protein MIMGU_mgv1a004585mg [Erythranthe guttata]708002541 (10)dbj|BAF95167.1|9e-27similar to putative preRNA processing ribonucleoprotein [Ipomoea nil]
JMFF011M09Sequence118002541 (10)
JMFF027G01Sequence521001607 (9)gb|EYU23115.1|2e-82hypothetical protein MIMGU_mgv1a004585mg [Erythranthe guttata]703002541 (10)dbj|BAF95167.1|9e-27similar to putative preRNA processing ribonucleoprotein [Ipomoea nil]
JMFF030D21Sequence508001607 (9)gb|EYU23114.1|2e-80hypothetical protein MIMGU_mgv1a004585mg [Erythranthe guttata]682002541 (10)dbj|BAF95167.1|9e-22similar to putative preRNA processing ribonucleoprotein [Ipomoea nil]
JMFF033A13Sequence545002541 (10)dbj|BAF95167.1|5e-43similar to putative preRNA processing ribonucleoprotein [Ipomoea nil]727002541 (10)dbj|BAF95167.1|4e-33similar to putative preRNA processing ribonucleoprotein [Ipomoea nil]
JMSF023I23Sequence681001607 (9)ref|XP_011083862.1|4e-139PREDICTED: nucleolar protein 56-like [Sesamum indicum]776002541 (10)dbj|BAF95167.1|9e-56similar to putative preRNA processing ribonucleoprotein [Ipomoea nil]
JMSF033I24Sequence653001607 (9)ref|XP_011083862.1|2e-131PREDICTED: nucleolar protein 56-like [Sesamum indicum]713002541 (10)dbj|BAF95167.1|2e-39similar to putative preRNA processing ribonucleoprotein [Ipomoea nil]
JMSF052I24Sequence661001607 (9)ref|XP_011083862.1|9e-117PREDICTED: nucleolar protein 56-like [Sesamum indicum]823002541 (10)dbj|BAF95167.1|5e-52similar to putative preRNA processing ribonucleoprotein [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052I24+ CCAAGTATGGTC
                      ____________________________________________________________
consensus CCAAGTATGGTC
 
. : . : . : . : . : . :
rJMSF023I23+ AAAACAAAGGGCGAATGGC
rJMSF052I24+ TTATTTTTTCATTCTTCTTTCATTGGTCGTGCTTCTGNCCAAAAACAAAGGGCGAATGGC
                      ____________________________________________________________
consensus TTATTTTTTCATTCTTCTTTCATTGGTCGTGCTTCTGNCCAAAAACAAAGGGCGAATGGC
 
. : . : . : . : . : . :
rJMSF033I24+ TGCTTCACGCCTAGACTGTTTCTTAGATAACAA
JMFF033A13- AGTGCTCTATTGCTTCACGCCTAGACTGTTTCTTAGATAACAA
rJMSF023I23+ TCGTTATCTTGCAAACAAGTGCTCTATTGCTTCACGCCTAGACTGTTTCTTAGATAACAA
rJMSF052I24+ TCGTTATCTTGCAAACAAGTGCTCTATTGCTTCACGCCTAGACTGTTTCTTAGATAACAA
rJMFF033A13+ CTTAGATAACAA
rJMFF011G22+ CGCCTAGACTGTTTCTTAGATAACAA
                      ____________________________________________________________
consensus TCGTTATCTTGCAAACAAGTGCTCTATTGCTTCACGCCTAGACTGTTTCTTAGATAACAA
 
. : . : . : . : . : . :
rJMSF033I24+ CACTACATCCTTTGGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGA
JMFF033A13- CACTACATCCTTTGGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGA
rJMSF023I23+ CACTACATCCTTTGGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGA
rJMSF052I24+ CACTACATCCTTTGGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGA
rJMFF033A13+ CACTACATCCTTTGGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGA
rJMFF011G22+ CACTACATCCTTTGGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGA
rJMFF027G01+ GGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGA
rJMFF030D21+ AGTTGAGGAGCGACTTGACTTTTATGA
rJMFF011M08+ TTGGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGA
                      ____________________________________________________________
consensus CACTACATCCTTTGGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGA
 
. : . : . : . : . : . :
rJMSF033I24+ TAAGGGTGTTGCACCGCGTAAAAACATAGATGTGATGAAAGCTGCTATAGAAAATTTCCA
JMFF033A13- TAAGGGTGTTGCACCACGTAAAAACATAGATGTGATGAAAGCTGCTATAGAAAATTTCCA
rJMSF023I23+ TAAGGGTGTTGCACCGCGTAAAAACATAGATGTGATGAAAGCTGCTATAGAAAATTTCCA
rJMSF052I24+ TAAGGGTGTTGCACCGCGTAAAAACATAGATGTGATGAAAGCTGCTATAGAAAATTTCCA
rJMFF033A13+ TAAGGGTGTTGCACCACGTAAAAACATAGATGTGATGAAAGCTGCTATAGAAAATTTCCA
rJMFF011G22+ TAAGGGTGTTGCACCGCGTAAAAACATAGATGTGATGAAAGCTGCTATAGAAAATTTCCA
rJMFF027G01+ TAAGGGTGTTGCACCGCGTAAAAACATAGATGTGATGAAAGCTGCTATAGAAAATTTCCA
rJMFF030D21+ TAAGGGTGTTGCACCGCGTAAAAACATAGATGTGATGAAAGCTGCTATAGAAAATTTCCA
rJMFF011M08+ TAAGGGTGTTGCACCGCGTAAAAACATAGATGTGATGAAAGCTGCTATAGAAAATTTCCA
                      ____________________________________________________________
consensus TAAGGGTGTTGCACCGCGTAAAAACATAGATGTGATGAAAGCTGCTATAGAAAATTTCCA
 
. : . : . : . : . : . :
rJMSF033I24+ AAGTAAAGATGAGTCTATGGATGTGGATACAGCACCCAGCCCAGCTTCCACAAAGAAGAG
JMFF033A13- AAGTAAAGATGAGTCTATGGATGTGGATACAGCACCCAGCCCAGCTTCCACAAAGAAGAG
rJMSF023I23+ AAGTAAAGATGAGTCTATGGATGTGGATACAGCACCCAGCCCAGCTTCCACAAAGAAGAG
rJMSF052I24+ AAGTAAAGATGAGTCTATGGATGTGGATACAGCACCCAGCCCAGCTTCCACAAAGAAGAG
rJMFF033A13+ AAGTAAAGATGAGTCTATGGATGTGGATACAGCACCCAGCCCAGCTTCCACAAAGAAGAG
rJMFF011G22+ AAGTAAAGATGAGTCTATGGATGTGGATACAGCACCCAGCCCAGCTTCCACAAAGAAGAG
rJMFF027G01+ AAGTAAAGATGAGTCTATGGATGTGGATACAGCACCCAGCCCAGCTTCCACAAAGAAGAG
rJMFF030D21+ AAGTAAAGATGAGTCTATGGATGTGGATACAGCACCCAGCCCAGCTTCCACAAAGAAGAG
rJMFF011M08+ AAGTAAAGATGAGTCTATGGATGTGGATACAGCACCCAGCCCAGCTTCCACAAAGAAGAG
                      ____________________________________________________________
consensus AAGTAAAGATGAGTCTATGGATGTGGATACAGCACCCAGCCCAGCTTCCACAAAGAAGAG
 
. : . : . : . : . : . :
rJMSF033I24+ CAAGAAAAAGAAATCCAAAGCTGTGGAGGATGGTGAACCCATGGAAGAAGGTAAACTTGA
JMFF033A13- CAAGAAAAGGAAATCCAAAGCTGTGGAGGATGGTGAACCCATGGAAGAAGGTAAACTTGA
rJMSF023I23+ CAAGAAAAAGAAATCCAAAGCTGTGGAGGATGGTGAACCCATGGAAGAAGGTAAACTTGA
rJMSF052I24+ CAAGAAAAAGAAATCCAAAGCTGTGGAGGATGGTGAACCCATGGAAGAAGGTAAACTTGA
rJMFF033A13+ CAAGAAAAGGAAATCCAAAGCTGTGGAGGATGGTGAACCCATGGAAGAAGGTAAACTTGA
rJMFF011G22+ CAAGAAAAAGAAATCCAAAGCTGTGGAGGATGGTGAACCCATGGAAGAAGGTAAACTTGA
rJMFF027G01+ CAAGAAAAAGAAATCCAAAGCTGTGGAGGATGGTGAACCCATGGAAGAAGGTAAACTTGA
rJMFF030D21+ CAAGAAAAAGAAATCCAAAGCTGTGGAGGATGGTGAACCCATGGAAGAAGGTAAACTTGA
rJMFF011M08+ CAAGAAAAAGAAATCCAAAGCTGTGGAGGATGGTGAACCCATGGAAGAAGGTAAACTTGA
                      ____________________________________________________________
consensus CAAGAAAAAGAAATCCAAAGCTGTGGAGGATGGTGAACCCATGGAAGAAGGTAAACTTGA
 
. : . : . : . : . : . :
rJMSF033I24+ TCATACAAATGGTGATGCATCTGAAGAACCAAAAAAGAAGAAACGGAAGGAGCGAAAAGC
JMFF033A13- TCATACAAATGGTGATGCATCTGAAGAACCAAAAAAGAAGAAACGGAAGGAGCGAAAAGC
rJMSF023I23+ TCATACAAATGGTGATGCATCTGAAGAACCAAAAAAGAAGAAACGGAAGGAGCGAAAAGC
rJMSF052I24+ TCATACAAATGGTGATGCATCTGAAGAACCAAAAAAGAAGAAACGGAAGGAGCGAAAAGC
rJMFF033A13+ TCATACAAATGGTGATGCATCTGAAGAACCAAAAAAGAAGAAACGGAAGGAGCGAAAAGC
rJMFF011G22+ TCATACAAATGGTGATGCATCTGAAGAACCAAAAAAGAAGAAACGGAAGGAGCGAAAAGC
rJMFF027G01+ TCATACAAATGGTGATGCATCTGAAGAACCAAAAAAGAAGAAACGGAAGGAGCGAAAAGC
rJMFF030D21+ TCATACAAATGGTGATGCATCTGAAGAACCAAAAAAGAAGAAACGGAAGGAGCGAAAAGC
rJMFF011M08+ TCATACAAATGGTGATGCATCTGAAGAACCAAAAAAGAAGAAACGGAAGGAGCGAAAAGC
                      ____________________________________________________________
consensus TCATACAAATGGTGATGCATCTGAAGAACCAAAAAAGAAGAAACGGAAGGAGCGAAAAGC
 
. : . : . : . : . : . :
rJMSF033I24+ AGAAGAGGAGCAAAACAACACAGGAGCAGAAAATGCACATGTTCTGAATGGAACTGACGC
JMFF033A13- AGAAGAGGAGCAAAACAACACAGGAGCAGAAAATGCACATGTTCTGAATGGAACTGACGC
rJMSF023I23+ AGAAGAGGAGCAAAACAACACAGGAGCAGAAAATGCACATGTTCTGAATGGAACTGACGC
rJMSF052I24+ AGAAGAGGAGCAAAACAACACAGGAGCAGAAAATGCACATGTTCTGAATGGAACTGACGC
rJMFF033A13+ AGAAGAGGAGCAAAACAACACAGGAGCAGAAAATGCACATGTTCTGAATGGAACTGACGC
rJMFF011G22+ AGAAGAGGAGCAAAACAACACAGGAGCAGAAAATGCACATGTTCTGAATGGAACTGACGC
rJMFF027G01+ AGAAGAGGAGCAAAACAACACAGGAGCAGAAAATGCACATGTTCTGAATGGAACTGACGC
rJMFF030D21+ AGGAGAGGAGCAAAACAACACAGGAGCAGAAAATGCACATGTTCTGAATGGAACTGACGC
rJMFF011M08+ AGAAGAGGAGCAAAACAACACAGGAGCAGAAAATGCACATGTTCTGAATGGAACTGACGC
                      ____________________________________________________________
consensus AGAAGAGGAGCAAAACAACACAGGAGCAGAAAATGCACATGTTCTGAATGGAACTGACGC
 
. : . : . : . : . : . :
rJMSF033I24+ GGAGGATGGAAAGGCAAAAAAGAAGAAAAAGAAGAGTAAGGATGA-GGGAGAGGAAGTTC
JMFF033A13- GGAGGATGGAAAGGCAAAAAAGAAGAAAAAGAAGAGTAAGGATGAGGGGAGAGGAAGTTC
rJMSF023I23+ GGAGGATGGAAAGGCAAAAAAGAAGAAAAAGAAGAGTAAGGATGA-GGGAGAGGAAGTTC
rJMSF052I24+ GGAGGATGGAAAGGCAAAAAAGAAGAAAAAGAAGAGTAAGGATGA-GGGAGAGGAAGTTC
rJMFF033A13+ GGAGGATGGAAAGGCAAAAAAGAAGAAAAAGAAGAGTAAGGATGA-GGGAGAGGAAGTTC
rJMFF011G22+ GGAGGATGGAAAGGCAAAAAAGAAGAAAAAGAAGAGTAAGGATGA-GGGAGAGGAAGTTC
rJMFF027G01+ GGAGGATGGAAAGGCAAAAAAGAAGAAAAAGAAGAGTAAGGATGA-GGGAGAGGAAGTTC
rJMFF030D21+ GGAGGATGGAAAGGCAAAAAAGAAGAAAAAGAAGAGTAAGGATGA-GGGAGAGGAAGTTC
rJMFF011M08+ GGAGGATGGAAAGGCAAAAAAGAAGAAAAAGAAGAGTAAGGATGA-GGGAGAGGAAGTTC
                      ____________________________________________________________
consensus GGAGGATGGAAAGGCAAAAAAGAAGAAAAAGAAGAGTAAGGATGA-GGGAGAGGAAGTTC
 
. : . : . : . : . : . :
rJMSF033I24+ AACCAGCTACCGAAGGTAAAAAGAAAAAGAAAAAGTCCAAGGCTGAAAATGAAGACTGAA
JMFF033A13- AACCAGCTACCGAAGGTAAAAAGAAAAAGAAAAAGTCCAAGGCTGAAAATGAAGACTGAA
rJMSF023I23+ AACCAGCTACCGAAGGTAAAAAGAAAAAGAAAAAGTCCAAGGCTGAAAATGAAGACTGAA
rJMSF052I24+ AACCAGCTACCGAAGGTAAAAAGAAAAAGAAAAAGTCCAAGGCTGAAAATGAAGACTGAA
rJMFF033A13+ AACCAGCTACCGAAGGTAAAAAGAAAAAGAAAAAGTCCAAGGCTGAAAATGAAGACTGAA
rJMFF011G22+ AACCAGCTACCGAAGGTAAAAAGAAAAAGAAAAAGTCCAAGGCTGAAAATGAAGACTGAA
rJMFF027G01+ AACCAGCTACCGAAGGTAAAAAGAAAAAGAAAAAGTCCAAGGCTGAAAATGAAGACTGAA
rJMFF030D21+ AACCAGCTACCGAAGGTAAAAAGAAAAAGAAAAAGTCCAAGGCTGAAAATGAAGACTGAA
rJMFF011M09+ AAGACTGAA
rJMFF011M08+ AACCAGCTACCGAAGGTAAAAAGAAAAAGAAAAAGTCCAAGGCTGAAAATGAAGACTGAA
                      ____________________________________________________________
consensus AACCAGCTACCGAAGGTAAAAAGAAAAAGAAAAAGTCCAAGGCTGAAAATGAAGACTGAA
 
. : . : . : . : . : . :
rJMSF033I24+ TGAATGATACTAGTGTGAGATTGCAACCAGTGCCAGTTGTCTCTTCAGATTTGCTTGCTA
JMFF033A13- TGAATGATACTAGTGTGAGATT
rJMSF023I23+ TGAATGATACTAGTGTGAGATTGCAACCAGTGCCAGTTGTCTCTTCAGATTTGCTTGCTA
rJMSF052I24+ TGAATGATACTAGTGTGAGATTGCAACCAGTGCCAGTTGTCTCTTCAGATTTGCTTGCTA
rJMFF033A13+ TGAATGATACTAGTGTGAGATTGCAACCAGTGCCAGTTGTCTCTTCAGATTTGCTTGCTA
rJMFF011G22+ TGAATGATACTAGTGTGAGATTGCAACCAGTGCCAGTTGTCTCTTCAGATTTGCTTGCTA
rJMFF027G01+ TGAATGATACTAGTGTGAGATTGCAACCAGTGCCAGTTGTCTCTTCAGATTTGCTTGCTA
rJMFF030D21+ TGAATGATACTAGTGTGAGATTGCAACCAGTGCCAGTTGTCTCTTCAGATTTGCTTGCTA
rJMFF011M09+ TGAATGATANTAGTGTGAGATNGCAACCAGTGCCAGTTGTCTCTTCAGATTTGCTTNCTA
rJMFF011M08+ TGAATGATACTAGTGTGAGATTGCAACCAGTGCCAGTTGTCTCTTCAGATTTGCTTGCTA
                      ____________________________________________________________
consensus TGAATGATACTAGTGTGAGATTGCAACCAGTGCCAGTTGTCTCTTCAGATTTGCTTGCTA
 
. : . : . : . : . : . :
rJMSF033I24+ GCTTTCTCACATCTTTGAATGACTCAAATCTGAAAGGCCATGCCTGTATGTTGTAGGATT
rJMSF023I23+ GCTTTCTCACATCTTTGAATGACTCAAATCTGAAAGGCCATGCCTGTATGTTGTAGGATT
rJMSF052I24+ GCTTTCTCACATCTTTGAATGACTCAAATCTGAAAGGCCATGCCTGTATGTTGTAGGATT
rJMFF033A13+ GCTTTCTCACATCTTTGAATGACTCAAATCTGAAAGGGCATGCCTGTATGTTGTAGGATT
rJMFF011G22+ GCTTTCTCACATCTTTGAATGACTCAAATCTGAAAGGCCATGCCTGTATGTTGTAGGATT
rJMFF027G01+ GCTTTCTCACATCTTTGAATGACTCAAATCTGAAAGGCCATGCCTGTATGTTGTAGGATT
rJMFF030D21+ GCTTTCTCACATCTTTGAATGACTCAAATCTGAAAGGCCATGCCTGTATGTTGTAGGATT
rJMFF011M09+ GCTTTCTCNCATCTCCGAATGACTCAAATCTGAAAGGCCATNCCTGTAT
rJMFF011M08+ GCTTTCTCACATCTTTGAATGACTCAAATCTGAAAGGCCATGCCTGTATGTTGTAGGATT
                      ____________________________________________________________
consensus GCTTTCTCACATCTTTGAATGACTCAAATCTGAAAGGCCATGCCTGTATGTTGTAGGATT
 
. : . : . : . : . : . :
rJMSF033I24+ TCTCTTTTCTAGGGAATTTTTGTCATTGTTAGCGACCCCTACTCGAATTCGTTTTCATC
rJMSF023I23+ TCTCTTTTCTAGGGAATTTTTGTCATTGTTAGCGACCCCTACTCGAATTCGTTTTCATCA
rJMSF052I24+ TCTCTTTTCTAGGGAATTTTTGTCATTGTTAGCGACCCCTACTCGAATTCGTTTTCATCA
rJMFF033A13+ TCTCTTTTCTAGGGAATTTTTGTCATTGTTAGCGACCCCTACTCGAATTCGTTTTCATCA
rJMFF011G22+ TCTCTTTTCTAGGGAATTTTTGTCATTGTTAGCGACCCCTACTCGAATTCGTTTTCATCA
rJMFF027G01+ TCTCTTTTCTAGGGAATTTTTGTCATTGTTAGCGACCCCTACTCGAATTCGTTTTCATCA
rJMFF030D21+ TCTCTTTTCTAGGGAATTTTTGTCATTGTTAGCGACCCCTACTCGAATTCGTTTTCATCA
rJMFF011M08+ TCTCTTTTCTAGGGAATTTTTGTCATTGTTAGCGACCCCTACTCGAATTCGTTTTCATCA
                      ____________________________________________________________
consensus TCTCTTTTCTAGGGAATTTTTGTCATTGTTAGCGACCCCTACTCGAATTCGTTTTCATCA
 
. : . : . : . : . : . :
rJMSF023I23+ GTAA
rJMSF052I24+ GTAACTGTGCTATGTTGCACTGTATTCCAAAT
rJMFF033A13+ GTAACTGTGCTATGTTGCACTGTATTCCAAATACTCTTTTTAAAAATGCAACAACT
rJMFF011G22+ GTAACTGTGCTATGTTGCACTGTATTCCAAATACTCTTTTTAAAAATGCAACAACT
rJMFF027G01+ GTAACTGTGCTATGTTGCACTGTATTCCAAATACTCTTTTTAAAAATGCAACAACT
rJMFF030D21+ GTAACTGTGCTATGTTGCACTGTATTCCAAATACTCTTTTTAAAAATGCAACAACT
rJMFF011M08+ GTAACTGTGCTATGTTGCACTGTATTCCAAATACTCTTTTTAAAAATGCAACAACTCTAT
                      ____________________________________________________________
consensus GTAACTGTGCTATGTTGCACTGTATTCCAAATACTCTTTTTAAAAATGCAACAACTCTAT