Contig 002540:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011K03Sequence540009242 (5)gb|EPS63809.1|9e-05hypothetical protein M569_10976 [Genlisea aurea]815002540 (2)emb|CDP06628.1|2e-85unnamed protein product [Coffea canephora]
JMSF011J08Sequence300009242 (5)754002540 (2)ref|XP_009786341.1|302PREDICTED: uncharacterized protein LOC104234476 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF011K03+                                  TTGCTCAAATGCTCCGGGCTTAATTTGTCAACTCAN
                      ____________________________________________________________
consensus                                     TTGCTCAAATGCTCCGGGCTTAATTTGTCAACTCAN
 
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rJMSF011J08+          CCATCCAACCATAGTAACGGGGATGCAATGGATCTATCACCCGACAGCAGCAAAAGGAGA
rJMFF011K03+          CCATCCANCCATAGTAACGGGGATGCAATGGATCTATCACCCGACAGCAGCAAAAGGAGA
                      ____________________________________________________________
consensus             CCATCCAACCATAGTAACGGGGATGCAATGGATCTATCACCCGACAGCAGCAAAAGGAGA
 
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rJMSF011J08+          AAGGACTTGTTTCCCGAAGAAGAGTGTTAT---CAAGTAAACGTAAATCCTCCCGATCGA
rJMFF011K03+          AAGGACTTGTTTCCCGAAGAAGAGTGTTATCTGCAAGTAAACGTAAATCCTCCCGATCGA
                      ____________________________________________________________
consensus             AAGGACTTGTTTCCCGAAGAAGAGTGTTATCTGCAAGTAAACGTAAATCCTCCCGATCGA
 
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rJMSF011J08+          GTTCCCGACCCAAATGAGCCACACTGGCTGAATGAATTCAGTGGAGTTATGCGTGAGGTT
rJMFF011K03+          GTTCCCGACCCAAAT-AGCCACACTGGCTGAATGAATTCAGTGGAGTTATGCGTGAGGTT
                      ____________________________________________________________
consensus             GTTCCCGACCCAAATGAGCCACACTGGCTGAATGAATTCAGTGGAGTTATGCGTGAGGTT
 
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rJMSF011J08+          TACGGGCCCTTTACAGCCGCAAAAAGTATCTACGAAGACAAAGAAGGTTATTTGATCGTG
rJMFF011K03+          TACGGGCCCGTTACAGCCGCAAAAAGTATCTACGAAGACAAAGAAGGTTATTTGATCGTG
                      ____________________________________________________________
consensus             TACGGGCCCTTTACAGCCGCAAAAAGTATCTACGAAGACAAAGAAGGTTATTTGATCGTG
 
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rJMSF011J08+          ATCAGTTTGCCCTTTGTGGATCCCCAGAGAGTGAAGGTTTCTTGGAGGAACACACTCACA
rJMFF011K03+          ATCAGTTTGCCCTTTGTGGATCCCCAGAGAGTGAAGGTTTCTTGGAGGAACACACTCACA
                      ____________________________________________________________
consensus             ATCAGTTTGCCCTTTGTGGATCCCCAGAGAGTGAAGGTTTCTTGGAGGAACACACTCACA
 
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rJMSF011J08+          CACGGGATAATCAAGGTGTCTTGCTTTAGCATATCCCGCATGCCTTTCCTCAAGAGACAG
rJMFF011K03+          CACGGGATAATCAAGGTGTCTTGCTTTAGCATATCCCGCATGCCTTTCCTCAAGAGACAG
                      ____________________________________________________________
consensus             CACGGGATAATCAAGGTGTCTTGCTTTAGCATATCCCGCATGCCTTTCCTCAAGAGACAG
 
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rJMSF011J08+          AAAAGGACATTCAAACTCGCGGATTCATCGTCCGAACACTGCCCTCCCGGGGAATTTGTC
rJMFF011K03+          AAAAGGACATTCAAACTCGCGGATTCATCGTCCGAACACTGCCCTCCCGGGGAATTTGTC
                      ____________________________________________________________
consensus             AAAAGGACATTCAAACTCGCGGATTCATCGTCCGAACACTGCCCTCCCGGGGAATTTGTC
 
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rJMSF011J08+          AGAGAAATCCCCCTTTCAACCCGCATTCCCGAAGATGCTAACATAGAAGCCTACTTCGAT
rJMFF011K03+          AGAGAAATCCCCCTTTCAACCCGCATTCCCGAAGATGCTAACATAGAAGCCTACTTCGAT
                      ____________________________________________________________
consensus             AGAGAAATCCCCCTTTCAACCCGCATTCCCGAAGATGCTAACATAGAAGCCTACTTCGAT
 
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rJMSF011J08+          GGATCAGGGACGGTGCTCGAGATTCTCGTGCCTAAACT                      
rJMFF011K03+          GGATCAGGGACGGTGCTCGAGATTCTCGTGCCTAAACTTCAAGAAGGGTCAGAAGAACAC
                      ____________________________________________________________
consensus             GGATCAGGGACGGTGCTCGAGATTCTCGTGCCTAAACTTCAAGAAGGGTCAGAAGAACAC
 
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rJMFF011K03+          GAGGTACGCGTATGCCTTCATCCCCACCTCGGTGGCAATGATCTTATTCTCAACTAGAGG
                      ____________________________________________________________
consensus             GAGGTACGCGTATGCCTTCATCCCCACCTCGGTGGCAATGATCTTATTCTCAACTAGAGG
 
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rJMFF011K03+          CAAATCGGGGTCATTCATGGTTGATTATCATGGTATTCATTGTTGCTAAAAAATATATAT
                      ____________________________________________________________
consensus             CAAATCGGGGTCATTCATGGTTGATTATCATGGTATTCATTGTTGCTAAAAAATATATAT
 
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rJMFF011K03+          GTTTGTGTAGCCTGAACATGCACATGTCTTATGTAATGTTCCATTTTCACACCCCCTAGA
                      ____________________________________________________________
consensus             GTTTGTGTAGCCTGAACATGCACATGTCTTATGTAATGTTCCATTTTCACACCCCCTAGA
 
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rJMFF011K03+          TGGTGTGTTTGTTGGTTGTTTGGGTATTCTATGCTTGTAGCAATGTTTTACTATGAAATA
                      ____________________________________________________________
consensus             TGGTGTGTTTGTTGGTTGTTTGGGTATTCTATGCTTGTAGCAATGTTTTACTATGAAATA