| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002M15 | Sequence | 279 | 002536 (8) | dbj|BAD95420.1| | 5e-07 | lipoamide dehydrogenase precursor [Arabidopsis thaliana] | |||||
| JMFF010B20 | Sequence | 574 | 001014 (6) | gb|KJB28786.1| | 9e-73 | hypothetical protein B456_005G069400 [Gossypium raimondii] | 708 | 002536 (8) | emb|CDO98724.1| | 4e-102 | unnamed protein product [Coffea canephora] |
| JMFF013M01 | Sequence | 661 | 002536 (8) | emb|CDO98724.1| | 2e-102 | unnamed protein product [Coffea canephora] | |||||
| JMSF002D08 | Sequence | 286 | 001014 (6) | ref|NP_566571.1| | 4e-11 | dihydrolipoyl dehydrogenase 2 [Arabidopsis thaliana] gb|AAM64759.1| lipoamide de | 748 | 002536 (8) | ref|XP_011071352.1| | 4e-124 | PREDICTED: dihydrolipoyl dehydrogenase 1, mitochondrial [Sesamum indicum] |
| JMSF013A12 | Sequence | 467 | 001014 (6) | gb|KJB28786.1| | 7e-54 | hypothetical protein B456_005G069400 [Gossypium raimondii] | 746 | 002536 (8) | ref|XP_011071352.1| | 3e-126 | PREDICTED: dihydrolipoyl dehydrogenase 1, mitochondrial [Sesamum indicum] |
| JMSF035D24 | Sequence | 683 | 001014 (6) | gb|ACJ11739.1| | 8e-96 | dihydrolipoamide dehydrogenase [Gossypium hirsutum] | 592 | 002536 (8) | ref|XP_011071352.1| | 2e-100 | PREDICTED: dihydrolipoyl dehydrogenase 1, mitochondrial [Sesamum indicum] |
| JMSF041I07 | Sequence | 718 | 001014 (6) | gb|ACJ11739.1| | 1e-121 | dihydrolipoamide dehydrogenase [Gossypium hirsutum] | 640 | 002536 (8) | emb|CDO98724.1| | 1e-102 | unnamed protein product [Coffea canephora] |
| JMSF053G07 | Sequence | 650 | 001014 (6) | gb|ACJ11739.1| | 2e-88 | dihydrolipoamide dehydrogenase [Gossypium hirsutum] | 913 | 002536 (8) | ref|XP_011071352.1| | 2e-138 | PREDICTED: dihydrolipoyl dehydrogenase 1, mitochondrial [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF053G07+ CCTTG
____________________________________________________________
consensus CCTTG
. : . : . : . : . : . :
rJMSF053G07+ AGAAGCAGANGATGAAATTTATGCTTAAAACTAAGGTGGTTTCAGTTGACAGTTCAGGTG
____________________________________________________________
consensus AGAAGCAGANGATGAAATTTATGCTTAAAACTAAGGTGGTTTCAGTTGACAGTTCAGGTG
. : . : . : . : . : . :
rJMSF053G07+ ATGGTGTTAAGTTGACACTTGAAACCGGCAGCTGGTGGTGATCAGACTGTTCTTGAAGCT
____________________________________________________________
consensus ATGGTGTTAAGTTGACACTTGAAACCGGCAGCTGGTGGTGATCAGACTGTTCTTGAAGCT
. : . : . : . : . : . :
rJMSF053G07+ GATGTTGTTCTTGTTTCTGCTGGTAGAACTCCATTTACTGCAGGGCTTCAATTGGACAAA
rJMSF002D08+ ACTGCAGGGCTTCAATTGGACAAA
rJMSF013A12+ CTCCATTTACTGCAGGGCTTCAATTGGACAAA
____________________________________________________________
consensus GATGTTGTTCTTGTTTCTGCTGGTAGAACTCCATTTACTGCAGGGCTTCAATTGGACAAA
. : . : . : . : . : . :
rJMSF053G07+ ATAGGAGTTGAAACTGACAAGATTGGTAGAATCTTGGTTAATGAACGCTTTGCCACTAGC
rJMSF002D08+ ATAGGAGTTGAAACTGACAAGATTGGTAGAATCTTGGTTAATGAACGCTTTGCCACTAGC
rJMSF013A12+ ATAGGAGTTGAAACTGACAAGATTGGTAGAATCTTGGTTAATGAACGCTTTGCCACTAGC
____________________________________________________________
consensus ATAGGAGTTGAAACTGACAAGATTGGTAGAATCTTGGTTAATGAACGCTTTGCCACTAGC
. : . : . : . : . : . :
rJMSF053G07+ GTACCCGGGGTCTATGCCATTGGTGATGTTATTCCAGGTCCTATGTTGGCTCACAAGGCA
rJMSF002D08+ GTACCCGGGGTCTATGCCATTGGTGATGTTATTCCAGGTCCTATGTTGGCTCACAAGGCA
rJMSF041I07+ CTATGCCATTGGTGATGTTATTCCAGGTCCTATGTTGGCTCACAAGGCA
rJMSF013A12+ GTACCCGGGGTCTATGCCATTGGTGATGTTATTCCAGGTCCTATGTTGGCTCACAAGGCA
rJMFF013M01+ TATGCCATTGGTGATGTTATTCCAGGTCCTATGTTGGCTCACAAGGCA
rJMSF035D24+ TGGTGATGTTATTCCAGGTCCTATGTTGGCTCACAAGGCA
rJMFF010B20+ TATGCCATTGGTGATGTTATTCCAGGTCCTATGTTGGCTCACAAGGCA
____________________________________________________________
consensus GTACCCGGGGTCTATGCCATTGGTGATGTTATTCCAGGTCCTATGTTGGCTCACAAGGCA
. : . : . : . : . : . :
rJMSF053G07+ GAGGAAGATGGTGTCGCATGTGTGGAATTCATTGCAGGCAAGGAAGGCCACGTGGACTAT
rJMSF002D08+ GAGGAAGATGGTGTCGCATGTGTGGAATTCATTGCAGGCAAGGAAGGCCACGTGGACTAT
rJMSF041I07+ GAGGAAGATGGTGTCGCATGTGTGGAATTCATTGCAGGCAAGGAAGGCCACGTGGACTAT
rJMSF013A12+ GAGGAAGATGGTGTCGCATGTGTGGAATTCATTGCAGGCAAGGAAGGCCACGTGGACTAT
rJMFF013M01+ GAGGAAGATGGTGTCGCATGTGTGGAATTCATTGCAGGCAAGGAAGGCCACGTGGACTAT
rJMSF035D24+ GAGGAAGATGGTGTCGCATGTGTGGAATTCATTGCAGGCAAGGAAGGCCACGTGGACTAT
rJMFF010B20+ GAGGAAGATGGTGTCGCATGTGTGGAATTCATTGCAGGCAAGGAAGGCCACGTGGACTAT
____________________________________________________________
consensus GAGGAAGATGGTGTCGCATGTGTGGAATTCATTGCAGGCAAGGAAGGCCACGTGGACTAT
. : . : . : . : . : . :
rJMSF053G07+ GATATGGTTCCCGGGGTTGTGTACACACACCCTGAGGTGGCCTCAGTTGGAAAAACCGAG
rJMSF002D08+ GATATGGTTCCCGGGGTTGTGTACACACACCCTGAGGTGGCCTCAGTTGGAAAAACCGAG
rJMSF041I07+ GATATGGTTCCCGGGGTTGTGTACACACACCCTGAGGTGGCCTCAGTTGGAAAAACCGAG
rJMSF013A12+ GATATGGTTCCCGGGGTTGTGTACACACACCCTGAGGTGGCCTCAGTTGGAAAAACCGAG
rJMFF013M01+ GATATGGTTCCCGGGGTTGTGTACACACACCCTGAGGTGGCCTCAGTTGGAAAAACCGAG
rJMSF035D24+ GATATGGTTCCCGGGGTTGTGTACACACACCCTGAGGTGGCCTCAGTTGGAAAAACCGAG
rJMFF010B20+ GATATGGTTCCCGGGGTTGTGTACACACACCCTGAGGTGGCCTCAGTTGGAAAAACCGAG
____________________________________________________________
consensus GATATGGTTCCCGGGGTTGTGTACACACACCCTGAGGTGGCCTCAGTTGGAAAAACCGAG
. : . : . : . : . : . :
rJMSF053G07+ GAACAAGTGAAGGCACTTGGAGTCAGTTATCGTGTTGGGAAGTTCCCTTTGATGGCAAAC
rJMSF002D08+ GAACAAGTGAAGGCACTTGGAGTCAGTTATCGTGTTGGGAAGTTCCCTTTGATGGCAAAC
rJMSF041I07+ GAACAAGTGAAGGCACTTGGAGTCAGTTATCGTGTTGGGAAGTTCCCTTTGATGGCAAAC
rJMSF013A12+ GAACAAGTGAAGGCACTTGGAGTCAGTTATCGTGTTGGGAAGTTCCCTTTGATGGCAAAC
rJMFF013M01+ GAACAAGTGAAGGCACTTGGAGTCAGTTATCGTGTTGGGAAGTTCCCTTTGATGGCAAAC
rJMSF035D24+ GAACAAGTGAAGGCACTTGGAGTCAGTTATCGTGTTGGGAAGTTCCCTTTGATGGCAAAC
rJMFF010B20+ GAACAAGTGAAGGCACTTGGAGTCAGTTATCGTGTTGGGAAGTTCCCTTTGATGGCAAAC
____________________________________________________________
consensus GAACAAGTGAAGGCACTTGGAGTCAGTTATCGTGTTGGGAAGTTCCCTTTGATGGCAAAC
. : . : . : . : . : . :
rJMSF053G07+ AGCAGGGCCAAGGCAATTGATGATGNTGAGGGACTAGTCAAGATCCTGGCTGAGAAGGAA
rJMSF002D08+ AGCAGGGCCAAGGCAATTGATGATGCTGAGGGACTAGTCAAGATCCTGGCTGAGAAGGAA
rJMSF041I07+ AGCAGGGCCAAGGCAATTGATGATGCTGAGGGACTAGTCAAGATCCTGGCTGAGAAGGAA
rJMSF013A12+ AGCAGGGCCAAGGCAATTGATGATGCTGAGGGACTAGTCAAGATCCTGGCTGAGAAGGAA
rJMFF013M01+ AGCAGGGCCAAGGCAATTGATGATGCTGAGGGACTAGTCAAGATCCTGGCTGAGAAGGAA
rJMSF035D24+ AGCAGGGCCAAGGCAATTGATGATGCTGAGGGACTAGTCAAGATCCTGGCTGAGAAGGAA
rJMFF010B20+ AGCAGGGCCAAGGCAATTGATGATGCTGAGGGACTAGTCAAGATCCTGGCTGAGAAGGAA
____________________________________________________________
consensus AGCAGGGCCAAGGCAATTGATGATGCTGAGGGACTAGTCAAGATCCTGGCTGAGAAGGAA
. : . : . : . : . : . :
rJMSF053G07+ ACCGACAAAATATTGGGCGTCCACATCATGGCACCAAACGCAGGAGAGCTCATNCACGAG
rJMSF002D08+ ACCGACAAAATATTGGGCGTCCACATCATGGCACCAAACGCAGGAGAGCTCATCCACGAG
rJMSF041I07+ ACCGACAAAATATTGGGCGTCCACATCATGGCACCAAACGCAGGAGAGCTCATCCACGAG
rJMSF013A12+ ACCGACAAAATATTGGGCGTCCACATCATGGCACCAAACGCAGGAGAGCTCATCCACGAG
rJMFF013M01+ ACCGACAAAATATTGGGCGTCCACATCATGGCACCAAACGCAGGAGAGCTCATCCACGAG
rJMSF035D24+ ACCGACAAAATATTGGGCGTCCACATCATGGCACCAAACGCAGGAGAGCTCATCCACGAG
rJMFF010B20+ ACCGACAAAATATTGGGCGTCCACATCATGGCACCAAACGCAGGAGAGCTCATCCACGAG
____________________________________________________________
consensus ACCGACAAAATATTGGGCGTCCACATCATGGCACCAAACGCAGGAGAGCTCATCCACGAG
. : . : . : . : . : . :
rJMSF053G07+ GCCGTGCTGGCATTGCAGTATGGAGCATCCAGCGAGGACATTGCTNGTNCATGTCATGCC
rJMSF002D08+ GCCGTGCTGGCATTGCAGTATGGAGCATCCAGCGAGGACATTGCTCGTACATGTCATGCC
rJMSF041I07+ GCCGTGCTGGCATTGCAGTATGGAGCATCCAGCGAGGACATTGCTCGTACATGTCATGCC
rJMSF013A12+ GCCGTGCTGGCATTGCAGTATGGAGCATCCAGCGAGGACATTGCTCGTACATGTCATGCC
rJMFF013M01+ GCCGTGCTGGCATTGCAGTATGGAGCATCCAGCGAGGACATTGCTCGTACATGTCATGCC
rJMSF035D24+ GCCGTGCTGGCATTGCAGTATGGAGCATCCAGCGAGGACATTGCTCGTACATGTCATGCC
rJMFF002M15+ TGTCATGCC
rJMFF010B20+ GCCGTGCTGGCATTGCAGTATGGAGCATCCAGCGAGGACATTGCTCGTACATGTCATGCC
____________________________________________________________
consensus GCCGTGCTGGCATTGCAGTATGGAGCATCCAGCGAGGACATTGCTCGTACATGTCATGCC
. : . : . : . : . : . :
rJMSF053G07+ CATCCAACAATGAGCGAGGCTCTTAAAGAAGCTGCCATGGCAACTTATGACAAACCAATT
rJMSF002D08+ CATCCAACAATGAGCGAGGCTCTTAAAGAAGCTGCCATGGCAACTTATGACAAACCAATT
rJMSF041I07+ CATCCAACAATGAGCGAGGCTCTTAAAGAAGCTGCCATGGCAACTTATGACAAACCAATT
rJMSF013A12+ CATCCAACAATGAGCGAGGCTCTTAAAGAAGCTGCCATGGCAACTTATGACAAACCAATT
rJMFF013M01+ CATCCAACAATGAGCGAGGCTCTTAAAGAAGCTGCCATGGCAACCTATGACAAACCAATT
rJMSF035D24+ CATCCAACAATGAGCGAGGCTCTTAAAGAAGCTGCCATGGCAACTTATGACAAACCAATT
rJMFF002M15+ CATCCAACAATGAGCGAGGCTNTTAAAGAAGCTGCCATGGCAACTTATGACAAACCAATT
rJMFF010B20+ CATCCAACAATGAGCGAGGCTCTTAAAGAAGCTGCCATGGCAACTTATGACAAACCAATT
____________________________________________________________
consensus CATCCAACAATGAGCGAGGCTCTTAAAGAAGCTGCCATGGCAACTTATGACAAACCAATT
. : . : . : . : . : . :
rJMSF053G07+ CACATTTAGAAAGTTGATGATATATTCTGTGTTTCTTGGTTTTGATATTTTTTTTGAAAT
rJMSF002D08+ CACATTTAGAAAGTTGATGATATATTCTGTGTTTCTTGGTTTTGATATTTTTTTTGAAAT
rJMSF041I07+ CACATTTAGAAAGTTGATGATATATTCTGTGTTTCTTGGTTTTGATATTTTTTTTGAAAT
rJMSF013A12+ CACATTTAGAAAGTTGATGATATATTCTGTGTTTCTTGGTTTTGATATTTTTTTTGAAAT
rJMFF013M01+ CACATTTAGAAAGTTGATGATATATTCTGTGTTTCTTGGTTTTGATATTTTTTTTGAAAT
rJMSF035D24+ CACATTTAGAAAGTTGATGATATATTCTGTGTTTCTTGGTTTTGATATTTTTTTTGAAAT
rJMFF002M15+ CACATTTAGAAAGTTGATGATATATTCTGTGTTTCTTGGTTTTGATATTTTTTTTGAAAT
rJMFF010B20+ CACATTTAGAAAGTTGATGATATATTCTGTGTTTCTTGGTTTTGATATTTTTTTTGAAAT
____________________________________________________________
consensus CACATTTAGAAAGTTGATGATATATTCTGTGTTTCTTGGTTTTGATATTTTTTTTGAAAT
. : . : . : . : . : . :
rJMSF053G07+ GACATTTAGCACAGTTTTTGCTAATATGCCTCACCACCCAAGTAGATAGTGGTTGAACAG
rJMSF002D08+ GACATTTAGCACAGTTTTTGCTAATATGCCTCACCACCCAAGTAGATAGTGGTTGAACAG
rJMSF041I07+ GACATTTAGCACAGTTTTTGCTAATATGCCTCACCACCCAAGTAGATAGTGGTTGAACAG
rJMSF013A12+ GACATTTAGCACAGTTTTTGCTAATATGCCTCACCACCCAAGTAGATAGTGGTTGAACAG
rJMFF013M01+ GACATTTAGCACAGTTTTTGCTAATATGCCTCACCACCCAAGTAGATAGTGGTTGAACAG
rJMSF035D24+ GACATTTAGCACAGTTTTTGCTAATATGCCTCACCACCCAAGTAGATAGTGGTTGAACAG
rJMFF002M15+ GACATTTAGCACAGTTTTTGCTAATATGCCTCACCACCCAAGTAGATAGTGGTTGAACAG
rJMFF010B20+ GACATTTAGCACAGTTTTTGCTAATATGCCTCACCACCCAAGTAGATAGTGGTTGAACAG
____________________________________________________________
consensus GACATTTAGCACAGTTTTTGCTAATATGCCTCACCACCCAAGTAGATAGTGGTTGAACAG
. : . : . : . : . : . :
rJMSF053G07+ AAGTTTGCCACTTTCTTTGGGATTAAAAGTGCA
rJMSF002D08+ AAGTTTGCCACTTTCTTTGGGATTAAAAGTGCACTGATGTGGAGGCTTC
rJMSF041I07+ AAGTTTGCCACTTTCTTTGGGATTAAAAGTGCACTGATGTGGAGGCTTCTT
rJMSF013A12+ AAGTTTGCCACTTTCTTTGGGATTAAAAGTGCACTGATGTGGAGGCTTCTT
rJMFF013M01+ AAGTTTGCCACTTTCTTTGGGATTAAAAGTGCACTGATGTGGAGGCTTCTTTGTTTGCAT
rJMSF035D24+ AAGTT
rJMFF002M15+ AAGTTTGCCACTTTCTTTGGGATTAAAAGTGCACTGATGTGGAGGCTTCTTTGTTTGCAT
rJMFF010B20+ AAGTTTGCCACTTTCTTTGGGATTAAAAGTGCACTGATGTGGAGGCTTCTTTGTTTGCAT
____________________________________________________________
consensus AAGTTTGCCACTTTCTTTGGGATTAAAAGTGCACTGATGTGGAGGCTTCTTTGTTTGCAT
. : . : . : . : . : . :
rJMFF013M01+ TTCTGTC
rJMFF002M15+ TTCTGTCTCTATTCATACAAATAAAAATAT
rJMFF010B20+ TTCTGTCTCTATTCATACAAATAAAAATATGAGCTGATGTACAACTTTATGGTGATTTTT
____________________________________________________________
consensus TTCTGTCTCTATTCATACAAATAAAAATATGAGCTGATGTACAACTTTATGGTGATTTTT