| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009L04 | Sequence | 600 | 002533 (8) | ref|XP_006360292.1| | 4e-71 | PREDICTED: phosphopantothenate--cysteine ligase 2-like [Solanum tuberosum] | 717 | 002533 (8) | ref|XP_009780692.1| | 6e-66 | PREDICTED: phosphopantothenate--cysteine ligase 2-like [Nicotiana sylvestris] r |
| JMFF016H14 | Sequence | 663 | 002533 (8) | ref|XP_006360292.1| | 1e-79 | PREDICTED: phosphopantothenate--cysteine ligase 2-like [Solanum tuberosum] | 781 | 002533 (8) | ref|XP_009780692.1| | 8e-74 | PREDICTED: phosphopantothenate--cysteine ligase 2-like [Nicotiana sylvestris] r |
| JMSF043D09 | Sequence | 778 | 002533 (8) | ref|XP_006360292.1| | 1e-90 | PREDICTED: phosphopantothenate--cysteine ligase 2-like [Solanum tuberosum] | 773 | 002533 (8) | ref|XP_009780692.1| | 3e-63 | PREDICTED: phosphopantothenate--cysteine ligase 2-like [Nicotiana sylvestris] r |
| JMSF050D08 | Sequence | 715 | 002533 (8) | ref|XP_006360292.1| | 2e-88 | PREDICTED: phosphopantothenate--cysteine ligase 2-like [Solanum tuberosum] | 753 | 002533 (8) | ref|XP_009780692.1| | 1e-92 | PREDICTED: phosphopantothenate--cysteine ligase 2-like [Nicotiana sylvestris] r |
This contig is upended
. : . : . : . : . : . :
JMSF043D09- GCCAAGACCAACAATATTTGCTTATATA
____________________________________________________________
consensus GCCAAGACCAACAATATTTGCTTATATA
. : . : . : . : . : . :
JMSF050D08- CTGGCTGGGCACCACGCAGCGCAATCTTCCA
JMFF016H14- CTGGCTGGGCACCACGCAGCGCAATCTTCCA
JMFF009L04- CTGGCTGGGCACCACGCAGCGCAATCTTCCA
JMSF043D09- ATCTCAAAAATCTCTCAGCTCCTCCATATCTGGCTGGGCACCACGCAGCGCAATCTTCCA
____________________________________________________________
consensus ATCTCAAAAATCTCTCAGCTCCTCCATATCTGGCTGGGCACCACGCAGCGCAATCTTCCA
. : . : . : . : . : . :
JMSF050D08- TTCTTGCAAGCCAGCGCCACCGTCACTGTCAATTGTTGTAGACTAGTGCCGCCATCCACC
JMFF016H14- TTCTTGCAAGCCAGCGCCACCGTCACTGTCAATTGTTGTAGACTAGTGCCGCCATCCACC
JMFF009L04- TTCTTGCAAGCCAGCGCCACCGTCACTGTCAATTGTTGTAGACTAGTGCCGCCATCCACC
JMSF043D09- TTCTTGCAAGCCAGCGCCACCGTCACTGTCAATTGTTGTAGACTAGTGCCGCCATCCACC
____________________________________________________________
consensus TTCTTGCAAGCCAGCGCCACCGTCACTGTCAATTGTTGTAGACTAGTGCCGCCATCCACC
. : . : . : . : . : . :
JMSF050D08- TAATCGCCGCCGTCTGGTGAGAATTTGATGGCTGCTGCAAACCATATTGAAGAATTATAT
JMFF016H14- TTATCGCCGCCGTCTGGTGAGAATTTGATGGCTGCTGCAAACCATATTGAAGAATTATAT
JMFF009L04- TAATCGCCGCCGTCTGGTGAGAATTTGATGGCTGCTGCAAACCATATTGAAGAATTATAT
JMSF043D09- TAATCGCCGCCGTCTGGTGAGAATTTGATGGCTGCTGCAAACCATATTGAAGAATTATAT
____________________________________________________________
consensus TAATCGCCGCCGTCTGGTGAGAATTTGATGGCTGCTGCAAACCATATTGAAGAATTATAT
. : . : . : . : . : . :
JMSF050D08- GTAGCATCAGATCCCAAAATCAAGGAATTCTTTGACTCAGCTCCTCCACTTCAGGATGCT
JMFF016H14- GTAGCATCAGATCCCAAAATCAAGGAATTCTTTGACTCAGCTCCTCCACTTCAGGATGCT
JMFF009L04- GTAGCATCAGATCCCAAAATCAAGGAATTCTTTGACTCAGCTCCTCCACTTCAGGATGCT
JMSF043D09- GTAGCATCAGATCCCAAAATCAAGGAATTCTTTGACTCAGCTCCTCCACTTCAGGATGCT
____________________________________________________________
consensus GTAGCATCAGATCCCAAAATCAAGGAATTCTTTGACTCAGCTCCTCCACTTCAGGATGCT
. : . : . : . : . : . :
JMSF050D08- GCTGATATCAAGGCCAAGTTGAATGAATTTATTCAAAGGAATTTTTCAACTTCAGGAGAT
JMFF016H14- GCTGATATCAAGGCCAAGTTGAATGAATTTATTCAAAGGAATTTTTCAACTTCAGGAGAT
JMFF009L04- GCTGATATCAAGGCCAAGTTGAATGAATTTATTCAAAGGAATTTTTCAACTTCAGGAGAT
JMSF043D09- GCTGATATCAAGGCCAAGTTGAATGAATTTATTCAAAGGAATTTTTCAACTTCAGGAGAT
____________________________________________________________
consensus GCTGATATCAAGGCCAAGTTGAATGAATTTATTCAAAGGAATTTTTCAACTTCAGGAGAT
. : . : . : . : . : . :
JMSF050D08- GGAAAAGCAAATAGGATAGTGTGTGTTACTTCTGGTGGTACTACTGTACCATTAGAGAAG
JMFF016H14- GGAAAAGCAAATAGGATAGTGTGTGTTACTTCTGGTGGTACTACTGTACCATTAGAGAAG
JMFF009L04- GGAAAAGCAAATAGGATAGTGTGTGTTACTTCTGGTGGTACTACTGTACCATTAGAGAAG
JMSF043D09- GGAAAAGCAAATAGGATAGTGTGTGTTACTTCTGGTGGTACTACTGTACCATTAGAGAAG
____________________________________________________________
consensus GGAAAAGCAAATAGGATAGTGTGTGTTACTTCTGGTGGTACTACTGTACCATTAGAGAAG
. : . : . : . : . : . :
JMSF050D08- CGGTGCGTTCGATACATTGATAATTTCAGCTCAGGTCACAGAGGAGCTGCTTCTACAGAA
JMFF016H14- CGGTGCGTTCGATACATTGATAATTTCAGCTCAGGTCACAGAGGAGCTGCTTCTACAGAA
JMFF009L04- CGGTGCGTTCGATACATTGATAATTTCAGCTCAGGTCACAGAGGAGCTGCTTCTACAGAA
JMSF043D09- CGGTGCGTTCGATACATTGATAATTTCAGCTCAGGTCACAGAGGAGCTGCTTCTACAGAA
____________________________________________________________
consensus CGGTGCGTTCGATACATTGATAATTTCAGCTCAGGTCACAGAGGAGCTGCTTCTACAGAA
. : . : . : . : . : . :
JMSF050D08- TACTTTTTGAAGTCTGGTTATTCTGTCATATTTCTCTACCGGAGGGGTACCTGCCAACCA
JMFF016H14- TACTTTTTGAAGTCTGGTTATTCTGTCATATTTCTCTACCGGAGGGGTACCTGCCAACCA
JMFF009L04- TACTTTTTGAAGTCTGGTTATTCTGTCATATTTCTCTACCGGAGGGGTACCTGCCAACCA
JMSF043D09- TACTTTTTGAAGTCTGGTTATTCTGTCATATTTCTCTACCGGAGGGGTACCTGCCAACCA
____________________________________________________________
consensus TACTTTTTGAAGTCTGGTTATTCTGTCATATTTCTCTACCGGAGGGGTACCTGCCAACCA
. : . : . : . : . : . :
JMSF050D08- TTTTGTAGAGATCTTCCAGAAAATGCATTGCTTGAATGCTTAACATATAACAACGGGTCA
JMFF016H14- TTTTGTAGAGATCTTCCAGAAAATGCATTGCTTGAATGCTTAACATATAACAACGGGTCA
JMFF009L04- TTTTGTAGAGATCTTCCAGAAAATGCATTGCTTGAATGCTTAACATATAACAACGGGTCA
JMSF043D09- TTTTGTAGAGATCTTCCAGAAAATGCATTGCTTGAATGCTTAACATATAACAACGGGTCA
____________________________________________________________
consensus TTTTGTAGAGATCTTCCAGAAAATGCATTGCTTGAATGCTTAACATATAACAACGGGTCA
. : . : . : . : . : . :
JMSF050D08- AACCTTCAAGTGGATCAGAAATCTGCTGATGTGGTGAAAAGAGCAATTACTGAACATCAG
JMFF016H14- AACCTTCAAGTGGATCAGAAATCTGCTGATGTGGTGAAAAGAGCAATTACTGAACATCAG
JMFF009L04- AACCTTCAAGTGGATCAGAAATCTGCTGATGTGGTGAAAAGAGCAATTACTGAACATCAG
JMSF043D09- AACCTTCAAGTGGATCAGAAATCTGCTGATGTGGTGAAAAGAGCAATTACTGAACATCAG
rJMSF050D08+ TTCAAGTGGATCAGAAATCTGCTGATGTGGTGAAAAGAGCAATTACTGAACATCAG
____________________________________________________________
consensus AACCTTCAAGTGGATCAGAAATCTGCTGATGTGGTGAAAAGAGCAATTACTGAACATCAG
. : . : . : . : . : . :
JMSF050D08- GCTGCAGTGGCTGGTGGCTCTCTTCTGAAACTCCCATTCACAACAATTTTTGAGTATCTA
JMFF016H14- GCTGCAGTGGCTGGTGGCTCTCTTCTGAAACTCCCATTCACAACAATTTTTGAGTATCTA
JMFF009L04- GCTGCAGTGGCTGGTGGCTCTCTTC
JMSF043D09- GCTGCAGTGGCTGGTGGCTCTCTTCTGAAACTCCCATTCACAACAATTTTTGAGTATCTA
rJMSF050D08+ GCTGCAGTGGCTGGTGGCTCTCTTCTGAAACTCCCATTCACAACAATTTTTGAGTATCTA
rJMSF043D09+ CCCATTCACAACAATTTTTGAGTATCTA
rJMFF016H14+ ATTTTTGAGTATCTA
____________________________________________________________
consensus GCTGCAGTGGCTGGTGGCTCTCTTCTGAAACTCCCATTCACAACAATTTTTGAGTATCTA
. : . : . : . : . : . :
JMSF050D08- CAGATGTTGCAGCTGGTTGCTTTATTGCTCAGAAGAGTTGGTCCAAGTGCTATGTTTTAT
JMFF016H14- CAGATGTTGCAGCTGGTTGCTTTATTGCTC
JMSF043D09- CAGATGTTGCAGCTGGTTGCTTTATTGCTCAGAAGAGTTGGTCCAAGTGCTATGTTTTAT
rJMSF050D08+ CAGATGTTGCAGCTGGTTGCTTTATTGCTCAGAAGAGTTGGTCCAAGTGCTATGTTTTAT
rJMSF043D09+ CAGATGTTGCAGCTGGTTGCTTTATTGCTCAGAAGAGTTGGTCCAAGTGCTATGTTTTAT
rJMFF016H14+ CAGATGTTGCAGCTGGTTGCTTTATTGCTCAGAAGAGTTGGTCCAAGTGCTATGTTTTAT
____________________________________________________________
consensus CAGATGTTGCAGCTGGTTGCTTTATTGCTCAGAAGAGTTGGTCCAAGTGCTATGTTTTAT
. : . : . : . : . : . :
JMSF050D08- CTTGCTGCTGCAGTTTCTGACTT
JMSF043D09- CTTGCTGCTGCAGTTTCTGACTT
rJMSF050D08+ CTTGCTGCTGCAGTTTCTGAC-TTTTACGTTCCCTGGGAAAGCATGACAATGCATAAGAT
rJMSF043D09+ CTTGCTGCTGCAGTTTCTGACTTTTTACGTTCCCTGGGAAAGCATGACAATGCATAAGAT
rJMFF016H14+ CTTGCTGCTGCAGTTTCTGAC-TTTTACGTTCCCTGGGAAAGCATGACAATGCATAAGAT
rJMFF009L04+ TGCTGCTGCAGTTTCTGAC-TTTTTCGTTCCCTGGGAAAGCATGACAATGCATAAGAT
____________________________________________________________
consensus CTTGCTGCTGCAGTTTCTGACTTTTTACGTTCCCTGGGAAAGCATGACAATGCATAAGAT
. : . : . : . : . : . :
rJMSF050D08+ CCAGTCTGGATCTGGTCCTTTAGACATGCAGCTTGCTCAAGTACCGAAGATGCTTTCAGT
rJMSF043D09+ CCAGTCTGGATCTGGTCCTTTAGACATGCAGCTTGCTCAAGTACCGAAGATGCTTTCAGT
rJMFF016H14+ CCAGTCTGGATCTGGTCCTTTAGACATGCAGCTTGCTCAAGTACCGAAGATGCTTTCAGT
rJMFF009L04+ CCAGTCTGGATCTGGTCCTTTAGACATGCAGTTTGCTCAAGTACCGAAGATGCTTTCAGT
____________________________________________________________
consensus CCAGTCTGGATCTGGTCCTTTAGACATGCAGCTTGCTCAAGTACCGAAGATGCTTTCAGT
. : . : . : . : . : . :
rJMSF050D08+ GGTCAGAACTGAGTGGGCACCATTGGCTTTCTGCATATCTTTTAAGCTTGAAACTGACAA
rJMSF043D09+ GGTCAGAACTGAGTGGGCACCATTGGCTTTCTGCATATCTTTTAAGCTTGAAACTGACAA
rJMFF016H14+ GGTCAGAACTGAGTGGGCACCATTGGCTTTCTGCATATCTTTTAAGCTTGAAACTGACAA
rJMFF009L04+ GGTCAGAACTGAGTGGGCACCATTGGCTTTCTGCATATCTTTTAAGCTTGAAACTGACAA
____________________________________________________________
consensus GGTCAGAACTGAGTGGGCACCATTGGCTTTCTGCATATCTTTTAAGCTTGAAACTGACAA
. : . : . : . : . : . :
rJMSF050D08+ AGATATCCTGTTGGAGAAGGCCGGTATGGCTCTTAAGAAGTACGGAATGCATATGGTGGT
rJMSF043D09+ AGATATCCTGTTGGAGAAGGCCGGTATGGCTCTTAAGAAGTACGGAATGCATATGGTGGT
rJMFF016H14+ AGATATCCTGTTGGAGAAGGCCGGTATGGCTCTTAAGAAGTACGGAATGCATATGGTGGT
rJMFF009L04+ AGATATCCTGTTGGAGAAGGCCGGTATGGCTCTTAAGAAGTACGGAATGCATATGGTGGT
____________________________________________________________
consensus AGATATCCTGTTGGAGAAGGCCGGTATGGCTCTTAAGAAGTACGGAATGCATATGGTGGT
. : . : . : . : . : . :
rJMSF050D08+ AGCTAATGAGCTCTTAACTCGTAAGGAGGAAGTCATAGTTGTGTTACTGAATGATAAGAT
rJMSF043D09+ AGCTAATGAGCTCTTAACTCGTAAGGAGGAAGTCATAGTTGTGTTACTGAATGATAAGAT
rJMFF016H14+ AGCTAATGAGCTCTTAACTCGTAAGGAGGAAGTCATAGTTGTGTTACTGAATGATAAGAT
rJMFF009L04+ AGCTAATGAGCTCTTAACTCGTAAGGAGGAAGTCATAGTTGTGTTACTGAATGATAAGAT
____________________________________________________________
consensus AGCTAATGAGCTCTTAACTCGTAAGGAGGAAGTCATAGTTGTGTTACTGAATGATAAGAT
. : . : . : . : . : . :
rJMSF050D08+ AAGTGTTAGAAGAGAGAAATCCGAGGCTGGGGCTGATGTAGAGAATCCTCTGATCAAGCT
rJMSF043D09+ AAGTGTTAGAAGAGAGAAATCCGAGGCTGGGGCTGATGTAGAGAATCCTCTGATCAAGCT
rJMFF016H14+ AAGTGTTAGAAGAGAGAAATCCGAGGCTGGGGCTGATGTAGGGAATCCTCTGATCAAGCT
rJMFF009L04+ AAGTGTTAGAAGAGAGAAATCCGAGGCTGGGGCTGATGTAGAGAATCCTCTGATCAAGCT
____________________________________________________________
consensus AAGTGTTAGAAGAGAGAAATCCGAGGCTGGGGCTGATGTAGAGAATCCTCTGATCAAGCT
. : . : . : . : . : . :
rJMSF050D08+ CATTGTGGAAAGGCATTCGGAGTATATAACAGCCTCTTCTTCAGCATAATTGCCTGCAAG
rJMSF043D09+ CATTGTGGAAAGGCATTCGGAGTATATAACAGCCTCTTCTTCAGCATAATTGCCTGCAAG
rJMFF016H14+ CATTGTGGAAAGGCATTCGGAGTATATAACAGCCTCTTCTTCAGCATAATTGCCTGCAAG
rJMFF009L04+ CATTGTGGAAAGGCATTCGGAGTATATAACAGCCTCTTCTTCAGCATAATTGCCTGCAAG
____________________________________________________________
consensus CATTGTGGAAAGGCATTCGGAGTATATAACAGCCTCTTCTTCAGCATAATTGCCTGCAAG
. : . : . : . : . : . :
rJMSF050D08+ TAACCGATTTGCGCTGCAATTTGACAGGTGCTTTTCATCAACTACTCTGGGTTGAGAACT
rJMSF043D09+ TAACCGATTTGCGCTGCAATTTGACAGGTGCTTTTCATCAACTACTCTGGGTTGAGAACT
rJMFF016H14+ TAACCGATTTGCGCTGCAATTTGACAGGTGCTTTTCATCAACTACTCTGGGTTGAGAACT
rJMFF009L04+ TAACCGATTTGCGCTGCAATTTGACAGGTGCTTTTCATCAACTACTCTGGGTTGAGAACT
____________________________________________________________
consensus TAACCGATTTGCGCTGCAATTTGACAGGTGCTTTTCATCAACTACTCTGGGTTGAGAACT
. : . : . : . : . : . :
rJMSF050D08+ TGGGAACATTTCGTTTTGTTACCAGTCCTTTATTCCTAAACAAAACTGCAGAACCACCAC
rJMSF043D09+ TGGGAACATTTCGTTTTGTTACCAGTCCTTTATTCCTAAACAAAACTGCAGAACCACCAC
rJMFF016H14+ TGGGAACATTTCGTTTTGTTACCAGTCCTTTATTCCTAAACAAAACTGCAGAACCACCAC
rJMFF009L04+ TGGGAACATTTCGTTTTGTTACCAGTCCTTTATTCCTAAACAAAACTGCAGAACCACCAC
____________________________________________________________
consensus TGGGAACATTTCGTTTTGTTACCAGTCCTTTATTCCTAAACAAAACTGCAGAACCACCAC
. : . : . : . : . : . :
rJMSF050D08+ CCCATACCCCAAAAGAATAAGAATAAAAGGAAGGCTGC
rJMSF043D09+ CCCATACCCCAAAAGAATAAGAATAAAAGGAAGGCTGCAGTAGATTATTTGCATTGCATG
rJMFF016H14+ CCCATACCCCAAAAGAATAAGAATAAAAGGAAGGCTGCAGTAGATTATTTGCATTGCATG
rJMFF009L04+ CCCATACCCCAAAAGAATAAGAATAAAAGGAAGGCTGCAGTAGATTATTTGCATTGCATG
____________________________________________________________
consensus CCCATACCCCAAAAGAATAAGAATAAAAGGAAGGCTGCAGTAGATTATTTGCATTGCATG
. : . : . : . : . : . :
rJMSF043D09+ AAATAATAATTTCACATTTGTAAGGGACACTTCCTTTCTGCGGAAGGGACTGATCTGTCA
rJMFF016H14+ AAATAATAATTTCACATTTGTAAGGGACACTTCCTTTCTGCGGAAGGGACTGATCTGTCA
rJMFF009L04+ AAATAATAATTTCACATTTGTAAGGGACACTTCCTTTCTGCGGAAGGGACTGATCTGTCA
____________________________________________________________
consensus AAATAATAATTTCACATTTGTAAGGGACACTTCCTTTCTGCGGAAGGGACTGATCTGTCA
. : . : . : . : . : . :
rJMSF043D09+ CTTCAATTAGTTCTTGTTTATTTTA
rJMFF016H14+ CTTCAATTAGTTCTTGTTTATTTTATTTTATTGTCTTTATATTATAT
rJMFF009L04+ CTTCAATTAGTTCTTGTTTATTTTATTTTATTGTCTTTATATTATATATAATATAATATA
____________________________________________________________
consensus CTTCAATTAGTTCTTGTTTATTTTATTTTATTGTCTTTATATTATATATAATATAATATA