Contig 002532:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009I01Sequence530000739 (3)ref|XP_009796663.1|1e-72PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Nicotiana sylvestris]748002532 (4)ref|XP_009777302.1|4e-92PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like, partial [Nicotiana syl
JMFN038E24Sequence651002532 (4)ref|XP_009777302.1|7e-116PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like, partial [Nicotiana syl
JMSF022I10Sequence631000739 (3)ref|XP_009796663.1|1e-92PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Nicotiana sylvestris]768002532 (4)ref|XP_009777302.1|2e-115PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like, partial [Nicotiana syl
JMSF038K02Sequence631000739 (3)ref|XP_009796663.1|1e-92PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Nicotiana sylvestris]894002532 (4)ref|XP_009777302.1|9e-112PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like, partial [Nicotiana syl

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-                                             AATCGAGCAGCTGGGGTTCTACGTCG
                      ____________________________________________________________
consensus                                               AATCGAGCAGCTGGGGTTCTACGTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-           TGCACGCCTACGGCCTCACGGAGGCCACCGGGCCGGCGCTCGTGTGCGAGTGGCAGGGGA
rJMSF038K02+                                                            TGGCAGGGGA
                      ____________________________________________________________
consensus             TGCACGCCTACGGCCTCACGGAGGCCACCGGGCCGGCGCTCGTGTGCGAGTGGCAGGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-           AATGGAACCTTTTGCCCAAGGAGGAGCAGGCGGA-TTTAAAGGCCCGACAGGGGCTTAGC
rJMSF022I10+                                             TTTAAAGGCCCGACAGGGGCTTAGC
rJMSF038K02+          AATGGAACCTTTTGCCCAAGGAGGAGCAGGCGGATTTTAAAGGCCCGACAGGGGCTTAGC
                      ____________________________________________________________
consensus             AATGGAACCTTTTGCCCAAGGAGGAGCAGGCGGATTTTAAAGGCCCGACAGGGGCTTAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-           ATATTAACGTTGGCCGACGCCGAGGTTATGTCGGACCTGAAAACCATGAAAAAGGTGCCC
rJMSF022I10+          ATATTAACGTTGGCCGACGCCGAGGTTATGTCGGACCTGAAAACCATGAAAAAGGTGCCC
rJMSF038K02+          ATATTAACGTTGGCCGACGCCGAGGTTATGTCGGACCTGAAAACCATGAAAAAGGTGCCC
                      ____________________________________________________________
consensus             ATATTAACGTTGGCCGACGCCGAGGTTATGTCGGACCTGAAAACCATGAAAAAGGTGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-           CGAGACGGGAAGACCATGGGAGAAATCGTCCTCCGAGGTAGCAGTATCATGAAAGGCTAC
rJMSF022I10+          CGAGACGGGAAGACCATGGGAGAAATCGTCCTCCGAGGTAGCAGTATCATGAAAGGCTAC
rJMSF038K02+          CGAGACGGGAAGACCATGGGAGAAATCGTCCTCCGAGGTAGCAGTATCATGAAAGGCTAC
rJMFF009I01+                                          CCGAGGTAGCAGTATCATGAAAGGCTAC
                      ____________________________________________________________
consensus             CGAGACGGGAAGACCATGGGAGAAATCGTCCTCCGAGGTAGCAGTATCATGAAAGGCTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-           TACAAGAACGCCAAGGCGAATTCCGAGTCTTTCGTGAACGGCTGGTTCGTCACCGGCGAC
rJMSF022I10+          TACAAGAACGCCAAGGCGAATTCCGAGTCTTTCGTGAACGGCTGGTTCGTCACCGGCGAC
rJMSF038K02+          TACAAGAACGCCAAGGCGAATTCCGAGTCTTTCGTGAACGGCTGGTTCGTCACCGGCGAC
rJMFF009I01+          TACAAGAACGCCAAGGCGAATTCCGAGTCTTTCGTGAACGGCTGGTTCGTCACCGGCGAC
                      ____________________________________________________________
consensus             TACAAGAACGCCAAGGCGAATTCCGAGTCTTTCGTGAACGGCTGGTTCGTCACCGGCGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-           GTCGGCGTCATCCACCCCGACGGCTACTTAGAAATCAAGGACCGGTCAAAAGACGTCATC
rJMSF022I10+          GTCGGCGTCATCCACCCCGACGGCTACTTAGAAATCAAGGACCGGTCAAAAGACGTCATC
rJMSF038K02+          GTCGGCGTCATCCACCCCGACGGCTACTTAGAAATCAAGGACCGGTCAAAAGACGTCATC
rJMFF009I01+          GTCGGCGTCATCCACCCCGACGGCTACTTAGAAATCAAGGACCGGTCAAAAGACGTCATC
                      ____________________________________________________________
consensus             GTCGGCGTCATCCACCCCGACGGCTACTTAGAAATCAAGGACCGGTCAAAAGACGTCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-           ATTTCCGGCGGAGAAAACATCAGCAGCGTCGACGTCGAAAAAGCAATCATGAAACACCCC
rJMSF022I10+          ATTTCCGGCGGAGAAAACATCAGCAGCGTCGACGTCGAAAAAGCAATCATGAAACACCCC
rJMSF038K02+          ATTTCCGGCGGAGAAAACATCAGCAGCGTCGACGTCGAAAAAGCAATCATGAAACACCCC
rJMFF009I01+          ATTTCCGGCGGAGAAAACATCAGCAGCGTCGACGTCGAAAAAGCAATCATGAAACACCCC
                      ____________________________________________________________
consensus             ATTTCCGGCGGAGAAAACATCAGCAGCGTCGACGTCGAAAAAGCAATCATGAAACACCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-           AACGTGTCAGAAGTCGCCGTCGTCGCCATGCCGCATCCCAGGTGGGGCGAAAGCCCCTGC
rJMSF022I10+          AACGTGTCAGAAGTCGCCGTCGTCGCCATGCCGCATCCCAGGTGGGGCGAAAGCCCCTGC
rJMSF038K02+          AACGTGTCAGAAGTCGCCGTCGTCGCCATGCCGCATCCCAGGTGGGGCGAAAGCCCCTGC
rJMFF009I01+          AACGTGTCAGAAGTCGCCGTCGTCGCCATGCCGCATCCCAGGTGGGGCGAAAGCCCCTGC
                      ____________________________________________________________
consensus             AACGTGTCAGAAGTCGCCGTCGTCGCCATGCCGCATCCCAGGTGGGGCGAAAGCCCCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-           GCATTTGTAGTGGAGAAGTCGGCCGGAAAATTGAAAGAAGCCGAAATCGTGGCGCATTGC
rJMSF022I10+          GCATTTGTAGTGGAGAAGTCGGCCGGAAAATTGAAAGAAGCCGAAATCGTGGCGCATTGC
rJMSF038K02+          GCATTTGTAGTGGAGAAGTCGGCCGGAAAATTGAAAGAAGCCGAAATCGTGGCGCATTGC
rJMFF009I01+          GCATTTGTAGTGGAGAAGTCGGCCGGAAAATTGAAAGAAGCCGAAATCGTGGCGCATTGC
                      ____________________________________________________________
consensus             GCATTTGTAGTGGAGAAGTCGGCCGGAAAATTGAAAGAAGCCGAAATCGTGGCGCATTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-           CGGAAAACCCTGCCGGGATTTATGGTGCCCAAGAAAATCCCAATCGANGAAGACTTGCCC
rJMSF022I10+          CGGAAAACCCTGCCGGGATTTATGGTGCCCAAGAAAATCCAAATCGAGAAAGACTTGCCC
rJMSF038K02+          CGGAAAACCCTGCCGGGATTTATGGTGCCCAAGAAAATCCAAATCGAGAAAGACTTGCCC
rJMFF009I01+          CGGAAAACCCTGCCGGGATTTATGGTGCCCAAGAAAATCCAAATCGAGAAAGACTTGCCC
                      ____________________________________________________________
consensus             CGGAAAACCCTGCCGGGATTTATGGTGCCCAAGAAAATCCAAATCGAGAAAGACTTGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038E24-           NAGACTNTCACTGGGGAACCTCTAAA                                  
rJMSF022I10+          AAGACTTCAACTGGGAAACCTCTAAAACATCTGCTAAGGGCAAAGGCCAAAACTTTTGTG
rJMSF038K02+          AAGACTTCAACTGGGAAACCTCTAAAACATCTGCTAAGGGCAAAGGCCAAAACTTTTGTG
rJMFF009I01+          AAGACTTCAACTGGGAAACCTCTAAAACATCTGCTAAGGGCAAAGGCCAAAACTTTTGTG
                      ____________________________________________________________
consensus             AAGACTTCAACTGGGAAACCTCTAAAACATCTGCTAAGGGCAAAGGCCAAAACTTTTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF022I10+          ATATCGGAAAATGTGAATGAGCCATCAACAAGCAGCAAAAGGTCAAACCAAGTCAACCGG
rJMSF038K02+          ATATCGGAAAATGTGAATGAGCCATCAACAAGCAGCAAAAGGTCAAACCAAGTCAACCGG
rJMFF009I01+          ATATCGGAAAATGTGAATGAGCCATCAACAAGCAGCAAAAGGTCAAACCAAGTCAACCGG
                      ____________________________________________________________
consensus             ATATCGGAAAATGTGAATGAGCCATCAACAAGCAGCAAAAGGTCAAACCAAGTCAACCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF022I10+          GAAAAGCCAAGATTTTACGATCAACCACCGGAGCAAGTTCTTGCTATATCTCGTCTCTAA
rJMSF038K02+          GAAAAGCCAAGATTTTACGATCAACCACCGGAGCAAGTTCTTGCTATATCTCGTCTCTAA
rJMFF009I01+          GAAAAGCCAAGATTTTACGATCAACCACCGGAGCAAGTTCTTGCTATATCTCGTCTCTAA
                      ____________________________________________________________
consensus             GAAAAGCCAAGATTTTACGATCAACCACCGGAGCAAGTTCTTGCTATATCTCGTCTCTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF022I10+          ATAAATTAAACAAATACATGTATGTATAGATAAACAAAAGCATCATCTGATCTGATCTGA
rJMSF038K02+          ATAAATTAAACAAATACATGTATGTATAGATAAACAAAAGCATCATCTGATCTGATCTGA
rJMFF009I01+          ATAAATTAAACAAATACATGTATGTATAGATAAACAAAAGCATCATCTGATCTGATCTGA
                      ____________________________________________________________
consensus             ATAAATTAAACAAATACATGTATGTATAGATAAACAAAAGCATCATCTGATCTGATCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF022I10+          TCCAAGT                                                     
rJMSF038K02+          TCCAAGTGTTTTGTTCTTTTCTTGTTTTAATATTGTTAGTATGCACGTGTACGGTGTACC
rJMFF009I01+          TCCAAGTGTTTTGTTCTTTTCTTGTTTTAATATTGTTAGTATGCACGTGTACGGTGTACC
                      ____________________________________________________________
consensus             TCCAAGTGTTTTGTTCTTTTCTTGTTTTAATATTGTTAGTATGCACGTGTACGGTGTACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF038K02+          TTATCTTTTATGGCTGCTACTTTCGAGTATTTCTCTAAACAAAT                
rJMFF009I01+          TTATCTTTTATGGCTGCTACTTTCGAGTATTTCTCTAAACAAATAAATTCATATCATCAC
                      ____________________________________________________________
consensus             TTATCTTTTATGGCTGCTACTTTCGAGTATTTCTCTAAACAAATAAATTCATATCATCAC