Contig 002532:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009I01Sequence530000739 (3)ref|XP_009796663.1|1e-72PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Nicotiana sylvestris]748002532 (4)ref|XP_009777302.1|4e-92PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like, partial [Nicotiana syl
JMFN038E24Sequence651002532 (4)ref|XP_009777302.1|7e-116PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like, partial [Nicotiana syl
JMSF022I10Sequence631000739 (3)ref|XP_009796663.1|1e-92PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Nicotiana sylvestris]768002532 (4)ref|XP_009777302.1|2e-115PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like, partial [Nicotiana syl
JMSF038K02Sequence631000739 (3)ref|XP_009796663.1|1e-92PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Nicotiana sylvestris]894002532 (4)ref|XP_009777302.1|9e-112PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like, partial [Nicotiana syl

Alignment

This contig is upended


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JMFN038E24- AATCGAGCAGCTGGGGTTCTACGTCG
                      ____________________________________________________________
consensus AATCGAGCAGCTGGGGTTCTACGTCG
 
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JMFN038E24- TGCACGCCTACGGCCTCACGGAGGCCACCGGGCCGGCGCTCGTGTGCGAGTGGCAGGGGA
rJMSF038K02+ TGGCAGGGGA
                      ____________________________________________________________
consensus TGCACGCCTACGGCCTCACGGAGGCCACCGGGCCGGCGCTCGTGTGCGAGTGGCAGGGGA
 
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JMFN038E24- AATGGAACCTTTTGCCCAAGGAGGAGCAGGCGGA-TTTAAAGGCCCGACAGGGGCTTAGC
rJMSF022I10+ TTTAAAGGCCCGACAGGGGCTTAGC
rJMSF038K02+ AATGGAACCTTTTGCCCAAGGAGGAGCAGGCGGATTTTAAAGGCCCGACAGGGGCTTAGC
                      ____________________________________________________________
consensus AATGGAACCTTTTGCCCAAGGAGGAGCAGGCGGATTTTAAAGGCCCGACAGGGGCTTAGC
 
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JMFN038E24- ATATTAACGTTGGCCGACGCCGAGGTTATGTCGGACCTGAAAACCATGAAAAAGGTGCCC
rJMSF022I10+ ATATTAACGTTGGCCGACGCCGAGGTTATGTCGGACCTGAAAACCATGAAAAAGGTGCCC
rJMSF038K02+ ATATTAACGTTGGCCGACGCCGAGGTTATGTCGGACCTGAAAACCATGAAAAAGGTGCCC
                      ____________________________________________________________
consensus ATATTAACGTTGGCCGACGCCGAGGTTATGTCGGACCTGAAAACCATGAAAAAGGTGCCC
 
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JMFN038E24- CGAGACGGGAAGACCATGGGAGAAATCGTCCTCCGAGGTAGCAGTATCATGAAAGGCTAC
rJMSF022I10+ CGAGACGGGAAGACCATGGGAGAAATCGTCCTCCGAGGTAGCAGTATCATGAAAGGCTAC
rJMSF038K02+ CGAGACGGGAAGACCATGGGAGAAATCGTCCTCCGAGGTAGCAGTATCATGAAAGGCTAC
rJMFF009I01+ CCGAGGTAGCAGTATCATGAAAGGCTAC
                      ____________________________________________________________
consensus CGAGACGGGAAGACCATGGGAGAAATCGTCCTCCGAGGTAGCAGTATCATGAAAGGCTAC
 
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JMFN038E24- TACAAGAACGCCAAGGCGAATTCCGAGTCTTTCGTGAACGGCTGGTTCGTCACCGGCGAC
rJMSF022I10+ TACAAGAACGCCAAGGCGAATTCCGAGTCTTTCGTGAACGGCTGGTTCGTCACCGGCGAC
rJMSF038K02+ TACAAGAACGCCAAGGCGAATTCCGAGTCTTTCGTGAACGGCTGGTTCGTCACCGGCGAC
rJMFF009I01+ TACAAGAACGCCAAGGCGAATTCCGAGTCTTTCGTGAACGGCTGGTTCGTCACCGGCGAC
                      ____________________________________________________________
consensus TACAAGAACGCCAAGGCGAATTCCGAGTCTTTCGTGAACGGCTGGTTCGTCACCGGCGAC
 
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JMFN038E24- GTCGGCGTCATCCACCCCGACGGCTACTTAGAAATCAAGGACCGGTCAAAAGACGTCATC
rJMSF022I10+ GTCGGCGTCATCCACCCCGACGGCTACTTAGAAATCAAGGACCGGTCAAAAGACGTCATC
rJMSF038K02+ GTCGGCGTCATCCACCCCGACGGCTACTTAGAAATCAAGGACCGGTCAAAAGACGTCATC
rJMFF009I01+ GTCGGCGTCATCCACCCCGACGGCTACTTAGAAATCAAGGACCGGTCAAAAGACGTCATC
                      ____________________________________________________________
consensus GTCGGCGTCATCCACCCCGACGGCTACTTAGAAATCAAGGACCGGTCAAAAGACGTCATC
 
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JMFN038E24- ATTTCCGGCGGAGAAAACATCAGCAGCGTCGACGTCGAAAAAGCAATCATGAAACACCCC
rJMSF022I10+ ATTTCCGGCGGAGAAAACATCAGCAGCGTCGACGTCGAAAAAGCAATCATGAAACACCCC
rJMSF038K02+ ATTTCCGGCGGAGAAAACATCAGCAGCGTCGACGTCGAAAAAGCAATCATGAAACACCCC
rJMFF009I01+ ATTTCCGGCGGAGAAAACATCAGCAGCGTCGACGTCGAAAAAGCAATCATGAAACACCCC
                      ____________________________________________________________
consensus ATTTCCGGCGGAGAAAACATCAGCAGCGTCGACGTCGAAAAAGCAATCATGAAACACCCC
 
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JMFN038E24- AACGTGTCAGAAGTCGCCGTCGTCGCCATGCCGCATCCCAGGTGGGGCGAAAGCCCCTGC
rJMSF022I10+ AACGTGTCAGAAGTCGCCGTCGTCGCCATGCCGCATCCCAGGTGGGGCGAAAGCCCCTGC
rJMSF038K02+ AACGTGTCAGAAGTCGCCGTCGTCGCCATGCCGCATCCCAGGTGGGGCGAAAGCCCCTGC
rJMFF009I01+ AACGTGTCAGAAGTCGCCGTCGTCGCCATGCCGCATCCCAGGTGGGGCGAAAGCCCCTGC
                      ____________________________________________________________
consensus AACGTGTCAGAAGTCGCCGTCGTCGCCATGCCGCATCCCAGGTGGGGCGAAAGCCCCTGC
 
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JMFN038E24- GCATTTGTAGTGGAGAAGTCGGCCGGAAAATTGAAAGAAGCCGAAATCGTGGCGCATTGC
rJMSF022I10+ GCATTTGTAGTGGAGAAGTCGGCCGGAAAATTGAAAGAAGCCGAAATCGTGGCGCATTGC
rJMSF038K02+ GCATTTGTAGTGGAGAAGTCGGCCGGAAAATTGAAAGAAGCCGAAATCGTGGCGCATTGC
rJMFF009I01+ GCATTTGTAGTGGAGAAGTCGGCCGGAAAATTGAAAGAAGCCGAAATCGTGGCGCATTGC
                      ____________________________________________________________
consensus GCATTTGTAGTGGAGAAGTCGGCCGGAAAATTGAAAGAAGCCGAAATCGTGGCGCATTGC
 
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JMFN038E24- CGGAAAACCCTGCCGGGATTTATGGTGCCCAAGAAAATCCCAATCGANGAAGACTTGCCC
rJMSF022I10+ CGGAAAACCCTGCCGGGATTTATGGTGCCCAAGAAAATCCAAATCGAGAAAGACTTGCCC
rJMSF038K02+ CGGAAAACCCTGCCGGGATTTATGGTGCCCAAGAAAATCCAAATCGAGAAAGACTTGCCC
rJMFF009I01+ CGGAAAACCCTGCCGGGATTTATGGTGCCCAAGAAAATCCAAATCGAGAAAGACTTGCCC
                      ____________________________________________________________
consensus CGGAAAACCCTGCCGGGATTTATGGTGCCCAAGAAAATCCAAATCGAGAAAGACTTGCCC
 
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JMFN038E24- NAGACTNTCACTGGGGAACCTCTAAA
rJMSF022I10+ AAGACTTCAACTGGGAAACCTCTAAAACATCTGCTAAGGGCAAAGGCCAAAACTTTTGTG
rJMSF038K02+ AAGACTTCAACTGGGAAACCTCTAAAACATCTGCTAAGGGCAAAGGCCAAAACTTTTGTG
rJMFF009I01+ AAGACTTCAACTGGGAAACCTCTAAAACATCTGCTAAGGGCAAAGGCCAAAACTTTTGTG
                      ____________________________________________________________
consensus AAGACTTCAACTGGGAAACCTCTAAAACATCTGCTAAGGGCAAAGGCCAAAACTTTTGTG
 
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rJMSF022I10+ ATATCGGAAAATGTGAATGAGCCATCAACAAGCAGCAAAAGGTCAAACCAAGTCAACCGG
rJMSF038K02+ ATATCGGAAAATGTGAATGAGCCATCAACAAGCAGCAAAAGGTCAAACCAAGTCAACCGG
rJMFF009I01+ ATATCGGAAAATGTGAATGAGCCATCAACAAGCAGCAAAAGGTCAAACCAAGTCAACCGG
                      ____________________________________________________________
consensus ATATCGGAAAATGTGAATGAGCCATCAACAAGCAGCAAAAGGTCAAACCAAGTCAACCGG
 
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rJMSF022I10+ GAAAAGCCAAGATTTTACGATCAACCACCGGAGCAAGTTCTTGCTATATCTCGTCTCTAA
rJMSF038K02+ GAAAAGCCAAGATTTTACGATCAACCACCGGAGCAAGTTCTTGCTATATCTCGTCTCTAA
rJMFF009I01+ GAAAAGCCAAGATTTTACGATCAACCACCGGAGCAAGTTCTTGCTATATCTCGTCTCTAA
                      ____________________________________________________________
consensus GAAAAGCCAAGATTTTACGATCAACCACCGGAGCAAGTTCTTGCTATATCTCGTCTCTAA
 
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rJMSF022I10+ ATAAATTAAACAAATACATGTATGTATAGATAAACAAAAGCATCATCTGATCTGATCTGA
rJMSF038K02+ ATAAATTAAACAAATACATGTATGTATAGATAAACAAAAGCATCATCTGATCTGATCTGA
rJMFF009I01+ ATAAATTAAACAAATACATGTATGTATAGATAAACAAAAGCATCATCTGATCTGATCTGA
                      ____________________________________________________________
consensus ATAAATTAAACAAATACATGTATGTATAGATAAACAAAAGCATCATCTGATCTGATCTGA
 
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rJMSF022I10+ TCCAAGT
rJMSF038K02+ TCCAAGTGTTTTGTTCTTTTCTTGTTTTAATATTGTTAGTATGCACGTGTACGGTGTACC
rJMFF009I01+ TCCAAGTGTTTTGTTCTTTTCTTGTTTTAATATTGTTAGTATGCACGTGTACGGTGTACC
                      ____________________________________________________________
consensus TCCAAGTGTTTTGTTCTTTTCTTGTTTTAATATTGTTAGTATGCACGTGTACGGTGTACC
 
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rJMSF038K02+ TTATCTTTTATGGCTGCTACTTTCGAGTATTTCTCTAAACAAAT
rJMFF009I01+ TTATCTTTTATGGCTGCTACTTTCGAGTATTTCTCTAAACAAATAAATTCATATCATCAC
                      ____________________________________________________________
consensus TTATCTTTTATGGCTGCTACTTTCGAGTATTTCTCTAAACAAATAAATTCATATCATCAC