Contig 002520:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006P08Sequence473000786 (144)dbj|BAA92317.1|5e-41polyphenol oxidase I [Ipomoea batatas]182002520 (2)
JMFF043N17Sequence602000786 (144)dbj|BAA92317.1|2e-40polyphenol oxidase I [Ipomoea batatas]541002520 (2)ref|XP_004235318.1|1e-09PREDICTED: neurofilament medium polypeptide [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF043N17+ GACAGGGAAACGGGCGGTGGTGG
                      ____________________________________________________________
consensus GACAGGGAAACGGGCGGTGGTGG
 
. : . : . : . : . : . :
rJMFF043N17+ TGAAGGTGGAGCCGAAGAAGGAGGAGGGTGCAGGGGAGGGGGAGAAGAAGGCGGAGGAGG
                      ____________________________________________________________
consensus TGAAGGTGGAGCCGAAGAAGGAGGAGGGTGCAGGGGAGGGGGAGAAGAAGGCGGAGGAGG
 
. : . : . : . : . : . :
rJMFF043N17+ AGAAGAAAGCGGAGGAAGGGAAGGATGGTGATGGCGGCGGGGAGAAGAAGGAAGGCGGCG
                      ____________________________________________________________
consensus AGAAGAAAGCGGAGGAAGGGAAGGATGGTGATGGCGGCGGGGAGAAGAAGGAAGGCGGCG
 
. : . : . : . : . : . :
rJMFF043N17+ AAAGTGGTGGCGGGGAGAAGAAGGAAGGCGAGGGGGGTGTTGAATTGCCCGAAGACCCAA
                      ____________________________________________________________
consensus AAAGTGGTGGCGGGGAGAAGAAGGAAGGCGAGGGGGGTGTTGAATTGCCCGAAGACCCAA
 
. : . : . : . : . : . :
rJMFF043N17+ AACTGGAAATGAAAAAACATGAACTCTACTACTACTACCCCCCTATACAAGCTCAATATC
                      ____________________________________________________________
consensus AACTGGAAATGAAAAAACATGAACTCTACTACTACTACCCCCCTATACAAGCTCAATATC
 
. : . : . : . : . : . :
rJMFF043N17+ ACCATCAAAGGTTTGGTGCACAAGATGGTGGGTATGGCTATGGGTACCCACAGATGCCAC
                      ____________________________________________________________
consensus ACCATCAAAGGTTTGGTGCACAAGATGGTGGGTATGGCTATGGGTACCCACAGATGCCAC
 
. : . : . : . : . : . :
rJMFF043N17+ AGATGTTCAGTGATGAGAACCCTAATGCATGTTCAGTTATGTAAATTGAATGGAACATGA
                      ____________________________________________________________
consensus AGATGTTCAGTGATGAGAACCCTAATGCATGTTCAGTTATGTAAATTGAATGGAACATGA
 
. : . : . : . : . : . :
rJMFF043N17+ GAGGGTATGTTAGTCACATGGTGGGGGGTAGTGGGTGGGGGGGGGGGGGAGGGGTCCCTC
rJMFF006P08+ GGGGGGGGGGGGGAGGGGTCCCTC
                      ____________________________________________________________
consensus GAGGGTATGTTAGTCACATGGTGGGGGGTAGTGGGTGGGGGGGGGGGGGAGGGGTCCCTC
 
. : . : . : . : . : . :
rJMFF043N17+ CATGGACAAAAACTGTGGGGGCCATCTCTTCTTCCTTTGACTGGTTGTGCTCTGCATGTG
rJMFF006P08+ CATGGACAAAAACTGTGGGGGCCATCTCTTCTTCCTTTGACTGGTTGTGCTCTGCATGTG
                      ____________________________________________________________
consensus CATGGACAAAAACTGTGGGGGCCATCTCTTCTTCCTTTGACTGGTTGTGCTCTGCATGTG
 
. : . : . : . : . : . :
rJMFF043N17+ GCCCTTGTCTGGGGCCTCATTTAGTAGTTTATGTAATG
rJMFF006P08+ GCCCTTGTCTGGGGCCTCATTTAGTAGTTTATGTAATGTCTGCAACCAGAAACTGTAGAA
                      ____________________________________________________________
consensus GCCCTTGTCTGGGGCCTCATTTAGTAGTTTATGTAATGTCTGCAACCAGAAACTGTAGAA