| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006L23 | Sequence | 599 | 003584 (5) | ref|XP_009789015.1| | 1e-42 | PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X1 [Nico | 800 | 002518 (5) | ref|XP_009789016.1| | 7e-65 | PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Nico |
| JMFF012P07 | Sequence | 451 | 003584 (5) | 762 | 002518 (5) | ref|XP_009789016.1| | 4e-60 | PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Nico | |||
| JMFF029N15 | Sequence | 534 | 003584 (5) | ref|XP_006343290.1| | 2e-17 | PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Sola | 759 | 002518 (5) | ref|XP_009789016.1| | 2e-59 | PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Nico |
| JMSF011A05 | Sequence | 255 | 003584 (5) | 800 | 002518 (5) | ref|XP_009789016.1| | 4e-72 | PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Nico | |||
| JMSF034N08 | Sequence | 612 | 003584 (5) | ref|XP_006343289.1| | 2e-29 | PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X1 [Sola | 717 | 002518 (5) | ref|XP_009789016.1| | 4e-52 | PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Nico |
This contig is upended
. : . : . : . : . : . :
rJMSF011A05+ CACTGGGATAAATAACGAGACGGCATGTTGTCGGGCCATGGAGAAATACGTTTCGCACTT
rJMFF006L23+ GAGAAATACGTTTCGCACTT
____________________________________________________________
consensus CACTGGGATAAATAACGAGACGGCATGTTGTCGGGCCATGGAGAAATACGTTTCGCACTT
. : . : . : . : . : . :
rJMSF011A05+ GCAAAGACAGAGCTTTGTCACCAACTTGCAAGCTTTGGATTGCGCTGCTTCACTTGGTAT
rJMFF029N15+ GCAAAGACAGAGCTTNGTCACCAACTTGCAAGCTTTGGATTGCGCTGCTTCACTTGGTAT
rJMFF012P07+ GCAAAGACAGAGCTTTGTCACCAACTTGCAAGCTTTGGATTGCGCTGCTTCACTTGGTAT
rJMSF034N08+ TTGGATTGCGCTGCTTCACTTGGTAT
rJMFF006L23+ GCAAAGACAGAGCTTNGTCACCAACTTGCAAGCTTTGGATTGCGCTGCTTCACTTGGTAT
____________________________________________________________
consensus GCAAAGACAGAGCTTTGTCACCAACTTGCAAGCTTTGGATTGCGCTGCTTCACTTGGTAT
. : . : . : . : . : . :
rJMSF011A05+ GAAGTTACAGAAAGCCAACGTTACCCAAAATGTTTACAATCTCTGCCATATTACCCTGAA
rJMFF029N15+ GAAGTTACAGAAAGCCAACGTTACCCAAAATGTTTACAATCTCTGCCATATTACCCTGAA
rJMFF012P07+ GAAGTTACAGAAAGCCAACGTTACCCAAAATGTTTACAATCCCTGCCATATTACCCTGAA
rJMSF034N08+ GAAGTTACAGAAAGCCAACGTTACCCAAAATGTTTACAATCTCTGCCATATTACCCTGAA
rJMFF006L23+ GAAGTTACAGAAAGCCAACGTTACCCAAAATGTTTACAATCTCTGCCATATTACCCTGAA
____________________________________________________________
consensus GAAGTTACAGAAAGCCAACGTTACCCAAAATGTTTACAATCTCTGCCATATTACCCTGAA
. : . : . : . : . : . :
rJMSF011A05+ GGATTTTTCCGTTCAAGTTACGCCAGAAGTTTCCGGGTGCCTTTTGCCTAGTTTGCCATC
rJMFF029N15+ GGATTTTTCCGTTCAAGTTACGCCAGAAGTTTCCGGGTGCCTTTTGCCTAGTTTGCCATC
rJMFF012P07+ GGATTTTTCCGTTCAAGTTACGCCAGAAGTTTCCGGGTGCCTTTTGCCTAGTTTGCCATC
rJMSF034N08+ GGATTTTTCCGTTCAAGTTACGCCAGAAGTTTCCGGGTGCCTTTTGCCTAGTTTGCCATC
rJMFF006L23+ GGATTTTTCCGTTCAAGTTACGCCAGAAGTTTCCGGGTGCCTTTTGCCTAGTTTGCCATC
____________________________________________________________
consensus GGATTTTTCCGTTCAAGTTACGCCAGAAGTTTCCGGGTGCCTTTTGCCTAGTTTGCCATC
. : . : . : . : . : . :
rJMSF011A05+ AGATGCCATACTTGACCAAACCACCGGGATCAGCTTTGTCTGTGATTTGAACGATAACAT
rJMFF029N15+ AGATGCCATACTTGACCAAACCACCGGGATCAGCTTTGTCTGTGATTTGAACGATAACAT
rJMFF012P07+ AGATGCCATACTTGACCAAACCACCGGGATCAGCTTTGTCTGTGATTTGAACGATAACAT
rJMSF034N08+ AGATGCCATACTTGACCAAACCACCGGGATCAGCTTTGTCTGTGATTTGAACGATAACAT
rJMFF006L23+ AGATGCCATACTTGACCAAACCACCGGGATCAGCTTTGTCTGTGATTTGAACGATAACAT
____________________________________________________________
consensus AGATGCCATACTTGACCAAACCACCGGGATCAGCTTTGTCTGTGATTTGAACGATAACAT
. : . : . : . : . : . :
rJMSF011A05+ TCCAGCGCCTTGGCCATCTGCATCTCAGTCGCATGCTTCAACGTGCAATAAAACTGTCAG
rJMFF029N15+ TCCAGCGCCTTGGCCATCTGCATCTCAGTCGCATGCTTCAACGTGCAATAAAACTGTCAG
rJMFF012P07+ TCCAGCGCCTTGGCCATCTGCATCTCAGTCGCATGCTTCAACGTGCAATAAAACTGTCAG
rJMSF034N08+ TCCAGCGCCTTGGCCATCTGCATCTCAGTCGCATGCTTCAACGTGCAATAAAACTGTCAG
rJMFF006L23+ TCCAGCGCCTTGGCCATCTGCATCTCAGTCGCATGCTTCAACGTGCAATAAAACTGTCAG
____________________________________________________________
consensus TCCAGCGCCTTGGCCATCTGCATCTCAGTCGCATGCTTCAACGTGCAATAAAACTGTCAG
. : . : . : . : . : . :
rJMSF011A05+ AATTCCTGCACTTCCGGCTGCTGCATCTGGGCAAACCGGTCTTTACGTTTCATCCACAAG
rJMFF029N15+ AATTCCTGCACTTCCGGCTGCTGCATCTGGGCAAACCGGTCTTTACGTTTCATCCACAAG
rJMFF012P07+ AATTCCTGCACTTCCGGCTGCTGCATCTGGGCAAACCGGTCTTTACGTTTCATCCACAAG
rJMSF034N08+ AATTCCTGCACTTCCGGCTGCTGCATCTGGGCAAACCGGTCTTTACGTTTCATCCACAAG
rJMFF006L23+ AATTCCTGCACTTCCGGCTGCTGCATCTGGGCAAACCGGTCTTTACGTTTCATCCACAAG
____________________________________________________________
consensus AATTCCTGCACTTCCGGCTGCTGCATCTGGGCAAACCGGTCTTTACGTTTCATCCACAAG
. : . : . : . : . : . :
rJMSF011A05+ GTCTCTTCTGCTCGTAGTAGTCTCAACATTGCTTGTGCTGCTTCTGCCCTGAATTCGGTT
rJMFF029N15+ GTCTCTTCTGCTCGTAGTAGTCTCAACATTGCTTGTGCTGCTTCTGCCCTGAATTCGGTT
rJMFF012P07+ GTCTCTTCTGCTCGTAGTAGTCTCAACATTGCTTGTGCTGCTTCTGCCCTGAATTCGGTT
rJMSF034N08+ GTCTCTTCTGCTCGTAGTAGTCTCAACATTGCTTGTGCTGCTTCTGCCCTGAATTCGGTT
rJMFF006L23+ GTCTCTTCTGCTCGTAGTAGTCTCAACATTGCTTGTGCTGCTTCTGCCCTGAATTCGGTT
____________________________________________________________
consensus GTCTCTTCTGCTCGTAGTAGTCTCAACATTGCTTGTGCTGCTTCTGCCCTGAATTCGGTT
. : . : . : . : . : . :
rJMSF011A05+ TAGCCGTTCTTGTCTCTCAAGTTGTATGAAAGCCTTATTTGACTGATCCTTCAATCATTG
rJMFF029N15+ TAGCCGTTCTTGTCTCTCAAGTTGTATGAAAGCCTTATTTGACTGATCCTTCAATCATTG
rJMFF012P07+ TAGCCGTTCTTGTCTCTCAAGTTGTATGAAAGCCTTATTTGACTGATCCTTCAATCATTG
rJMSF034N08+ TAGCCGTTCTTGTCTCTCAAGTTGTATGAAAGCCTTATTTGACTGATCCTTCAATCATTG
rJMFF006L23+ TAGCCGTTCTTGTCTCTCAAGTTGTATGAAAGCCTTATTTGACTGATCCTTCAATCATTG
____________________________________________________________
consensus TAGCCGTTCTTGTCTCTCAAGTTGTATGAAAGCCTTATTTGACTGATCCTTCAATCATTG
. : . : . : . : . : . :
rJMSF011A05+ AAAGAAACAATGGTAGAAGTCAGAATGGTGAGAAAATTCTGTTTCAGATCAGATGTAATG
rJMFF029N15+ AAAGAAACAATGGTAGAAGTCAGAATGGTGAGAAAATTCTGTTTCAGATCAGATGTAATG
rJMFF012P07+ AAAGAAACAATGGTAGAAGTCAGAATGGTGAGAAAATTCTGTTTCAGATCAGATGTAATG
rJMSF034N08+ AAAGAAACAATGGTAGAAGTCAGAATGGTGAGAAAATTCTGTTTCAGATCAGATGTAATG
rJMFF006L23+ AAAGAAACAATGGTAGAAGTCAGAATGGTGAGAAAATTCTGTTTCAGATCAGATGTAATG
____________________________________________________________
consensus AAAGAAACAATGGTAGAAGTCAGAATGGTGAGAAAATTCTGTTTCAGATCAGATGTAATG
. : . : . : . : . : . :
rJMSF011A05+ TGTACAAAATGAAAGAAAAATGGTGCACCTGAGCTGCAATCTTGGTAGGTGCTTAGAGGT
rJMFF029N15+ TGTACAAAATGAAAGAAAAATGGTGCACCTGAGCTGCAATCTTGGTAGGTGCTTAGAGGT
rJMFF012P07+ TGTACAAAATGAAAGAAAAATGGTGCACCTGAGCTGCAATCTTGGTAGGTGCTTAGAGGT
rJMSF034N08+ TGTACAAAATGAAAGAAAAATGGTGCACCTGAGCTGCAATCTTGGTAGGTGCTTAGAGGT
rJMFF006L23+ TGTACAAAATGAAAGAAAAATGGTGCACCTGAGCTGCAATCTTGGTAGGTGCTTAGAGGT
____________________________________________________________
consensus TGTACAAAATGAAAGAAAAATGGTGCACCTGAGCTGCAATCTTGGTAGGTGCTTAGAGGT
. : . : . : . : . : . :
rJMSF011A05+ GGTGTTCATTTCAGAGTTAAATTTTGTCTAGAGGTTTCAGTATCACAGAAGATGAATTGA
rJMFF029N15+ GGTGTTTATTTCAGAGTTAAATTTTGTCTAGAGGTTTCAGTATCACAGAAGATGAATTGA
rJMFF012P07+ GGTGTTCATTTCAGAGTTAAATTTTGTCTAGAGGTTTCAGTATCACAGAAGATGAATTGA
rJMSF034N08+ GGTGTTCATTTCAGAGTTAAATTTTGTCTAGAGGTTTCAGTATCACAGAAGATGAATTGA
rJMFF006L23+ GGTGTTCATTTCAGAGTTAAATTTTGTCTAGAGGTTTCAGTATCACAGAAGATGAATTGA
____________________________________________________________
consensus GGTGTTCATTTCAGAGTTAAATTTTGTCTAGAGGTTTCAGTATCACAGAAGATGAATTGA
. : . : . : . : . : . :
rJMSF011A05+ ATTCCATGTAATTATCTCTTCAACTTTTCATATATATGTATGTAAAATTCTGAGAAAGCA
rJMFF029N15+ ATTCCATGTAATTATCTCTTCAACTTTTCATATATATGTATGTAAAATTCTGAGAAAGCA
rJMFF012P07+ ATTCCATGTAATTATCTCTTCAACTTTTCATATATATGTATGTAAAATTCTGAGAAAGCA
rJMSF034N08+ ATTCCATGTAATTATCTCTTCAACTTTTCATATATATGTATGTAAAATTCTGAGAAAGCA
rJMFF006L23+ ATTCCATGTAATTATCTCTTCAACTTTTCATATATATGTATGTAAAATTCTGAGAAAGCA
____________________________________________________________
consensus ATTCCATGTAATTATCTCTTCAACTTTTCATATATATGTATGTAAAATTCTGAGAAAGCA
. : . : . : . : . : . :
rJMSF011A05+ TTGAATTGTTTCAACTAATG
rJMFF029N15+ TTGAATTGTTTCAACTAATGTATAACATAAGATGAGATT
rJMFF012P07+ TTGAATTGTTTCAACTAATGTATAACATAAGATGAGATT
rJMSF034N08+ TTGAATTGTTTCAACTAATGTATAACATAAG
rJMFF006L23+ TTGAATTGTTTCAACTAATGTATAACATAAGATGAGATTTGAATGTAATGAAAAGTCAGT
____________________________________________________________
consensus TTGAATTGTTTCAACTAATGTATAACATAAGATGAGATTTGAATGTAATGAAAAGTCAGT