Contig 002508:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004J02Sequence536009194 (4)ref|XP_008444350.1|122PREDICTED: uncharacterized protein LOC103487703 [Cucumis melo]678002508 (2)ref|XP_009627407.1|168PREDICTED: uncharacterized protein LOC104117961 [Nicotiana tomentosiformis] ref|
JMSF005L22Sequence333009194 (4)421002508 (2)ref|XP_006438327.1|1e-24hypothetical protein CICLE_v10032113mg [Citrus clementina] ref|XP_006483900.1| P

Alignment

This contig is upended


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rJMFF004J02+                                                   CCAATGATTACAAGTTAAA
                      ____________________________________________________________
consensus                                                      CCAATGATTACAAGTTAAA
 
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rJMFF004J02+          TTTTCTGGTCATTTGCATGCATTCTGTAAATGCTGTTTGCCTTTTGGGCGATGTCATGTT
                      ____________________________________________________________
consensus             TTTTCTGGTCATTTGCATGCATTCTGTAAATGCTGTTTGCCTTTTGGGCGATGTCATGTT
 
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rJMSF005L22+                                         GCATATTTCATCCTTNGGACATGCGTATT
rJMFF004J02+          AAATCGCCTCCGATTCCCTTTCTTCCGAATTGCATATTTCATCCTTTGGACATGCGTATT
                      ____________________________________________________________
consensus             AAATCGCCTCCGATTCCCTTTCTTCCGAATTGCATATTTCATCCTTTGGACATGCGTATT
 
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rJMSF005L22+          NGTCACTTTCCAGTGGATCATCCATATGTGCGTTTCACTATGGTGGCCTTATTCATTTCT
rJMFF004J02+          TGTCACTTTCCAGTGGATCATCCATATGTGCGTTTCACTATGGTGGCCTTATTCATTTCT
                      ____________________________________________________________
consensus             TGTCACTTTCCAGTGGATCATCCATATGTGCGTTTCACTATGGTGGCCTTATTCATTTCT
 
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rJMSF005L22+          TGATTTGTCATCTCAATATGCTCCCTTATGGTATTTCGGAGTTGGGGCTCTTCATGTTCC
rJMFF004J02+          TGATTTGTCATCTCAATATGCTCCCTTATGGTATTTCGGAGTTGGGGCTCTTCATGTTCC
                      ____________________________________________________________
consensus             TGATTTGTCATCTCAATATGCTCCCTTATGGTATTTCGGAGTTGGGGCTCTTCATGTTCC
 
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rJMSF005L22+          GTGCTATGTTATCTTCGCACTTATCATAAAAATGAAGAAGTATTTCTTGTCGAGATTTGT
rJMFF004J02+          GTGCTATGTTATCTTCGCACTTATCATAAAAATGAAGAAGTATTTCTTGTCGAGATTTGT
                      ____________________________________________________________
consensus             GTGCTATGTTATCTTCGCACTTATCATAAAAATGAAGAAGTATTTCTTGTCGAGATTTGT
 
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rJMSF005L22+          CCAGACTCCTTAGGAATATAAGGCTGAGAAAGATGGGAAGGCTATGAAATATGATTCTTA
rJMFF004J02+          CCAGACTCCTTAGGAATATAAGGCTGAGAAAGATGGGAAGGCTATGAAATATGATTCTTA
                      ____________________________________________________________
consensus             CCAGACTCCTTAGGAATATAAGGCTGAGAAAGATGGGAAGGCTATGAAATATGATTCTTA
 
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rJMSF005L22+          GTCCAAATAGATTATCACNGTACTTGATTTTCAGAAGTATTTTGGTGATAATATAGTCCC
rJMFF004J02+          GTCCAAATAGATTATCACTGTACTTGATTTTCAGAAGTATTTTGGTGATAATATAGTCCC
                      ____________________________________________________________
consensus             GTCCAAATAGATTATCACTGTACTTGATTTTCAGAAGTATTTTGGTGATAATATAGTCCC
 
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rJMSF005L22+          ATAAAAGGAATATATGAATTGTTCATTTGCAAATTGTGGGACATGTNGGAAAACCATGTG
rJMFF004J02+          ATAAAAGGAATATATGAATTGTTCATTTGCAAATTGTGGGACATGTTGGAAAA-CATGTG
                      ____________________________________________________________
consensus             ATAAAAGGAATATATGAATTGTTCATTTGCAAATTGTGGGACATGTTGGAAAACCATGTG
 
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rJMSF005L22+          CATGGGATACAGCAGTTGATGCACAAAGCTTT                            
rJMFF004J02+          CATGGGATACAGCAGTTGATGCACAAAGCTTTGTTACCTGAAACTGGCAAAAAGTTGAAA
                      ____________________________________________________________
consensus             CATGGGATACAGCAGTTGATGCACAAAGCTTTGTTACCTGAAACTGGCAAAAAGTTGAAA
 
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rJMFF004J02+          ACATGGCAGAAATTTAGCATCAAATTCAGATTCTGGTTCGTCTTTATATGAATGATTTGC
                      ____________________________________________________________
consensus             ACATGGCAGAAATTTAGCATCAAATTCAGATTCTGGTTCGTCTTTATATGAATGATTTGC
 
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rJMFF004J02+          CCACTTGGTAGAATGTTTGTTTTGAGATTTAAGAACACTTACATATATTAAGGAAAACAA
                      ____________________________________________________________
consensus             CCACTTGGTAGAATGTTTGTTTTGAGATTTAAGAACACTTACATATATTAAGGAAAACAA