| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN004O14 | Sequence | 616 | 002489 (7) | gb|AET07429.1| | 3e-113 | Or protein [Ipomoea batatas] | |||||
| JMSF004N23 | Sequence | 314 | 002489 (7) | gb|AET07429.1| | 1e-30 | Or protein [Ipomoea batatas] | 180 | 002489 (7) | ref|XP_007131325.1| | 2e-18 | hypothetical protein PHAVU_011G004200g [Phaseolus vulgaris] gb|ESW03319.1| hypot |
| JMSF041O17 | Sequence | 794 | 002489 (7) | gb|AET07429.1| | 6e-140 | Or protein [Ipomoea batatas] | 817 | 002489 (7) | gb|AET07429.1| | 7e-145 | Or protein [Ipomoea batatas] |
| JMSF052D20 | Sequence | 644 | 002489 (7) | gb|AET07429.1| | 2e-75 | Or protein [Ipomoea batatas] | 872 | 002489 (7) | gb|AET07429.1| | 1e-145 | Or protein [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
rJMSF041O17- CTTCACTTTAATATATGAGTTGTTTTATCACACCACTGTATTGCCAGCCAGCATTT
____________________________________________________________
consensus CTTCACTTTAATATATGAGTTGTTTTATCACACCACTGTATTGCCAGCCAGCATTT
. : . : . : . : . : . :
rJMSF041O17- GATTTGGTCCGCAAACAGTTTATTAATTGCAAAATGCTCAAAATAACGTTGAAAAACTTT
rJMSF052D20- CGTTGAAAAACTTT
____________________________________________________________
consensus GATTTGGTCCGCAAACAGTTTATTAATTGCAAAATGCTCAAAATAACGTTGAAAAACTTT
. : . : . : . : . : . :
rJMSF004N23- ACCAAAACATTTGTCCAGAATCTTTACATCTAGGAGCACTAN
rJMSF041O17- CTATAGACATACATTTTGACCAAAACATTTGTCCAGAATCTTTACATCTAGGAGCACTAG
rJMSF052D20- CTATAGACATACATTTTGACCAAAACATTTGTCCAGAATCTTTACATCTAGGAGCACTAG
____________________________________________________________
consensus CTATAGACATACATTTTGACCAAAACATTTGTCCAGAATCTTTACATCTAGGAGCACTAG
. : . : . : . : . : . :
rJMSF004N23- AGCTACATGAGATTCCCATTTAATCAAATGGGTCAATTCGTGGGTCATGCTCGCTTGCCA
rJMSF041O17- AGCTACATGAGATTCCCATTTAATCAAATGGGTCAATTCGTGGGTCATGCTCGCTTGCCA
rJMSF052D20- AGCTACATGAGATTCCCATTTAATCAAATGGGTCAATTCGTGGGTCATGCTCGCTTGCCA
____________________________________________________________
consensus AGCTACATGAGATTCCCATTTAATCAAATGGGTCAATTCGTGGGTCATGCTCGCTTGCCA
. : . : . : . : . : . :
rJMSF004N23- TAGCCATCCCAGTACAAAGACATGTAGGGCACATGACCTTCCCAGAACCCGAGCAGTTTG
rJMSF041O17- TAGCCATCCCAGTACAAAGACATGTAGGGCACATGACCTTCCCAGAACCCGAGCAGTTTG
rJMSF052D20- TAGCCATCCCAGTACAAAGACATGTAGGGCACATGACCTTCCCAGAACCCGAGCAGTTTG
____________________________________________________________
consensus TAGCCATCCCAGTACAAAGACATGTAGGGCACATGACCTTCCCAGAACCCGAGCAGTTTG
. : . : . : . : . : . :
rJMSF004N23- TGCATCTTTCTGTTTTAG
rJMSF041O17- TGCATCTTTCTGTTTTAGGTGGAGATAGTGGCTGATCTCTACGATTAACTGTGGAGACAG
rJMSF052D20- TGCATCTTTCTGTTTTAGGTGGAGATAGTGGCTGATCTCTACGATTAACTGTGGAGACAG
____________________________________________________________
consensus TGCATCTTTCTGTTTTAGGTGGAGATAGTGGCTGATCTCTACGATTAACTGTGGAGACAG
. : . : . : . : . : . :
rJMSF041O17- GTTCGATAAGGACTAGTGATCCAGTGCTTGAACAGCGAGCACATGCAAGATACCCTGTTC
rJMSF052D20- GTTCGATAAGGACTAGTGATCCAGTGCTTGAACAGCGAGCACATGCAAGATACCCTGTTC
____________________________________________________________
consensus GTTCGATAAGGACTAGTGATCCAGTGCTTGAACAGCGAGCACATGCAAGATACCCTGTTC
. : . : . : . : . : . :
rJMSF041O17- CTAAACAGTACTTGCACCTCTTATGCTCCTGCTGTTTCACATTGTTTATTTCAACTACCA
rJMSF052D20- CTAAACAGTACTTGCACCTCTTATGCTCCTGCTGTTTCACATTGTTTATTTCAACTACCA
JMSF041O17+ TATTTCAACTACCA
____________________________________________________________
consensus CTAAACAGTACTTGCACCTCTTATGCTCCTGCTGTTTCACATTGTTTATTTCAACTACCA
. : . : . : . : . : . :
rJMSF041O17- TCAAGGCAGAGATTACCCCAACTGCTCCACCGGAGAAGGATGCCACAATGGGGTCCACAT
rJMSF052D20- TCAAGGCAGAGATTACCCCAACTGCTCCACCGGAGAAGGATGCCACAATGGGGTCCACAT
JMSF041O17+ TCAAGGCAGAGATTACCCCAACTGCTCCACCGGAGAAGGATGCCACAATGGGGTCCACAT
____________________________________________________________
consensus TCAAGGCAGAGATTACCCCAACTGCTCCACCGGAGAAGGATGCCACAATGGGGTCCACAT
. : . : . : . : . : . :
rJMSF041O17- CACTTAATTGCATCGGAAGGTGCATGCTGCGAATGAAATCAGCGTACGATGTACCTCCTA
rJMSF052D20- CACTTAATTGCATCGGAAGGTGCATGCTGCGAATGAAATCAGCGTACGATGTACCTCCTA
JMFN004O14+ GAATGAAATCAGCGTACGATGTACCTCCTA
JMSF041O17+ CACTTAATTGCATCGGAAGGTGCATGCTGCGAATGAAATCAGCGTACGATGTACCTCCTA
____________________________________________________________
consensus CACTTAATTGCATCGGAAGGTGCATGCTGCGAATGAAATCAGCGTACGATGTACCTCCTA
. : . : . : . : . : . :
rJMSF041O17- AGCCCAATTTTAGTTCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
rJMSF052D20- AGCCCAATTTTAGTTCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
JMFN004O14+ AGCCCAATTTTAGTTCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
JMSF041O17+ AGCCCAATTTTAGTTCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
JMSF052D20+ TCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
____________________________________________________________
consensus AGCCCAATTTTAGTTCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
. : . : . : . : . : . :
rJMSF041O17- TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
rJMSF052D20- TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
JMFN004O14+ TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
JMSF041O17+ TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
JMSF052D20+ TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
____________________________________________________________
consensus TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
. : . : . : . : . : . :
rJMSF041O17- AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
rJMSF052D20- AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
JMFN004O14+ AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
JMSF041O17+ AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
JMSF052D20+ AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
____________________________________________________________
consensus AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
. : . : . : . : . : . :
rJMSF041O17- GCTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGG
rJMSF052D20- GCTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGGAC--CTTCCATATGCAAAA
JMFN004O14+ GTTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGGACCTCTTCCATATGCAAAA
JMSF041O17+ GCTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGGACCTCTTCCATATGCAAAA
JMSF052D20+ GCTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGGAC--CTTCCATATGCAAAA
____________________________________________________________
consensus GCTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGGAC--CTTCCATATGCAAAA
. : . : . : . : . : . :
rJMSF052D20- ATATTTTATTCCGGCGACTCCGAATATTGTCTTGAATTTCTTTCAATTCCATTTGAGCAA
JMFN004O14+ ATATTTTATTCCGGCGACTCCGAATATTGTCTTGAATTTCTTTCAATTCCATTTGAGCAA
JMSF041O17+ ATATTTTATTCCGGCGACTCCGAATATTGTCTTGAATTTCTTTCAATTCCATTTGAGCAA
JMSF004N23+ AGCAA
JMSF052D20+ ATATTTTATTCCGGCGACTCCGAATATTGTCTTGAATTTCTTTCAATTCCATTTGAGCAA
____________________________________________________________
consensus ATATTTTATTCCGGCGACTCCGAATATTGTCTTGAATTTCTTTCAATTCCATTTGAGCAA
. : . : . : . : . : . :
rJMSF052D20- AGTCCTGCACTGTCTCAGGCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
JMFN004O14+ AGTCCTGCACTGTCTCAGGCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
JMSF041O17+ AGTCCTGCACTGTCTCAGGCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
JMSF004N23+ AGTCCTGCACTGTCTCAGNCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
JMSF052D20+ AGTCCTGCACTGTCTCAGGCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
____________________________________________________________
consensus AGTCCTGCACTGTCTCAGGCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
. : . : . : . : . : . :
rJMSF052D20- ATTCGGTGTCGACGGATGAA
JMFN004O14+ ATTCGGTGTCGACGGATGAAGAAAAGGAGGAGGAATCGGCATCAGCGGCCATGGAACGCA
JMSF041O17+ ATTCGGTGTCGACGGATGAAGAAAAGGAGGAGGAATCGGCATCAGCGGCCATGGAACGCA
JMSF004N23+ ATTCGGTGTCGACGGATGAAGAAAAGGAGGAGGAATCGGCATCAGCGGCCATGGAACGCA
JMSF052D20+ ATTCGGTGTCGACGGATGAAGAAAAGGAGGAGGAATCGGCATCAGCGGCCATGGAACGCA
____________________________________________________________
consensus ATTCGGTGTCGACGGATGAAGAAAAGGAGGAGGAATCGGCATCAGCGGCCATGGAACGCA
. : . : . : . : . : . :
JMFN004O14+ ACCTGACTCTGGATTTGAGCCTTCCATGAAGATGATACCGGGAACTGTGGAACGGCGAAG
JMSF041O17+ ACCTGACTCTGGATTTGAGCCTTCCATGAAGATGATACCGGGAACTGTGGAACGGCGAAG
JMSF004N23+ ACCTGACTCTGGATTTGAGCCTTCCATGAAGATGATACCGGGAACTGTGGAACGGCGAAG
JMSF052D20+ ACCTGACTCTGGATTTGAGCCTTCCATGAAGATGATACCGGGAACTGTGGAACGGCGAAG
____________________________________________________________
consensus ACCTGACTCTGGATTTGAGCCTTCCATGAAGATGATACCGGGAACTGTGGAACGGCGAAG
. : . : . : . : . : . :
JMFN004O14+ TGGAGAGATGAAACGGCGTCGTGGAGGACGAGAGCGACAAGATTCTACCTGAATATACCA
JMSF041O17+ TGGAGAGATGAAACGGCGTCGTGGAGGACGAGAGCGACAAGATTCTACCTGAATATACCA
JMSF004N23+ TGGAGAGATGAAACGGCGTCGTGGAGGACGAGAGCGACAAGATTCTACCTGAATATACCA
JMSF052D20+ TGGAGAGATGAAACGGCGTCGTGGAGGACGAGAGCGACAAGATTCTACCTGAATATACCA
____________________________________________________________
consensus TGGAGAGATGAAACGGCGTCGTGGAGGACGAGAGCGACAAGATTCTACCTGAATATACCA
. : . : . : . : . : . :
JMFN004O14+ TTTCAGGGAAAAGGAGAAGAGCTCTGAGATTAACGTCGAGCTCAAG
JMSF041O17+ TTTCAGGGAAAAGGAGAAGAGCTCTGAGATTAACGTCGAGCTCAAGCTGTATATTCTGTT
JMSF004N23+ TTTCAGGGAAAAGGAGAAGAGCTCTGAGATTAACGTCGAGCTCAAGCTGTATATTCTGTT
JMSF052D20+ TTTCAGGGAAAAGGAGAAGAGCTCTGAGATTAACGTCGAGCTCAAGCTGTATATTCTGTT
____________________________________________________________
consensus TTTCAGGGAAAAGGAGAAGAGCTCTGAGATTAACGTCGAGCTCAAGCTGTATATTCTGTT
. : . : . : . : . : . :
JMSF041O17+ CTGTTGGTAAAATAAGAGAGAGAAAGAGACGAGACAAAGGAAGTATCAAACTTGAGTG
JMSF004N23+ CTGT
JMSF052D20+ CTGTTGGTAAAATAAGAGAGAGAAAGAGACGAGACAAAGGAAGTATCAAACTTGAGTGTC
____________________________________________________________
consensus CTGTTGGTAAAATAAGAGAGAGAAAGAGACGAGACAAAGGAAGTATCAAACTTGAGTGTC