Contig 002486:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF041I21+                                         CAAGACTTTCGGTTNGGAATATCAGAAACA
                      ____________________________________________________________
consensus                                           CAAGACTTTCGGTTNGGAATATCAGAAACA
 
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JMSF041I21+           CGTGAAAACAAAAAGATTGCAGCATCTAGAGACTGAAAAAATGTCCGTGCTCCTGCAAAG
                      ____________________________________________________________
consensus             CGTGAAAACAAAAAGATTGCAGCATCTAGAGACTGAAAAAATGTCCGTGCTCCTGCAAAG
 
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JMSF041I21+           AAAAAATTCCCAATGCTTCCATTACTAAAACAAAACAAGTCTTCTGAGCGCCGAAGAATC
                      ____________________________________________________________
consensus             AAAAAATTCCCAATGCTTCCATTACTAAAACAAAACAAGTCTTCTGAGCGCCGAAGAATC
 
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JMSF041I21+           TGGTCTTGAAAGTAAGCCAAGAAAGCTCGTATAGTTTCCCTGTAAGGTTTTGAGATGCCT
                      ____________________________________________________________
consensus             TGGTCTTGAAAGTAAGCCAAGAAAGCTCGTATAGTTTCCCTGTAAGGTTTTGAGATGCCT
 
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JMSF041I21+           TTCCAAAGGTTATGGTTCCCTTCCACAATATCATACTCAAAAATATGGTTTCACTACCAC
JMSF051N24+                                                                 TACCAC
                      ____________________________________________________________
consensus             TTCCAAAGGTTATGGTTCCCTTCCACAATATCATACTCAAAAATATGGTTTCACTACCAC
 
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JMSF041I21+           TCTAGCTTTGCTTTTTGTGCATCAAGAGGTAGTCGATGACCAAGCAATGTTCTCACAGCA
JMSF051N24+           TCTAGCTTTGCTTTTTGTGCATCAAGAGGTAGTCGATGACCAAGCAATGTTCTCACAGCA
                      ____________________________________________________________
consensus             TCTAGCTTTGCTTTTTGTGCATCAAGAGGTAGTCGATGACCAAGCAATGTTCTCACAGCA
 
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JMSF041I21+           AGGGCCTCAGAGGTACTTTGATCAGACAGTCTCAAGCATCTTGACCGTATGTCCCCAACT
JMSF051N24+           AGGGCCTCAGAGGTACTTTGATCAGACAGTCTCAAGCATCTTGACCGTATGTCCCCAACT
                      ____________________________________________________________
consensus             AGGGCCTCAGAGGTACTTTGATCAGACAGTCTCAAGCATCTTGACCGTATGTCCCCAACT
 
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JMSF041I21+           GCAGGGCCACCAAGAACTCGGACAATCTCAGCTGTACTTCCACCATCATCAGAAACAGGA
JMSF051N24+           GCAGGGCCACCAAGAACTCGGACAATCTCAGCTGTACTTCCACCATCATCAGAAACAGGA
                      ____________________________________________________________
consensus             GCAGGGCCACCAAGAACTCGGACAATCTCAGCTGTACTTCCACCATCATCAGAAACAGGA
 
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JMSF041I21+           AGAACATGAGCAACACAAGTAGTTAACTTCTTAAGCTCTTCGGCAACACCATTAAAGGCT
JMSF051N24+           AGAACATGAGCAACACAAGTAGTTAACTTCTTAAGCTCTTCGGCAACACCATTAAAGGCT
                      ____________________________________________________________
consensus             AGAACATGAGCAACACAAGTAGTTAACTTCTTAAGCTCTTCGGCAACACCATTAAAGGCT
 
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JMSF041I21+           GTTCCACCCGAGAAAACCACCAGTGAGGGCTGATGAGCAGTGGGTACGGAGGAGTGGCAG
JMSF051N24+           GTTCCACCCGAGAAAACCACCAGTGAGGGCTGATGAGCAGTGGGTACGGAGGAGTGGCAG
                      ____________________________________________________________
consensus             GTTCCACCCGAGAAAACCACCAGTGAGGGCTGATGAGCAGTGGGTACGGAGGAGTGGCAG
 
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JMSF041I21+           TTGTGCGTGGGAGAGGTACGAGCGGAGGAAGCCATGAGAGAGAAGGAGAGAGATCTGTCT
JMSF051N24+           TTGTGCGTGGGAGAGGTACGAGCGGAGGAAGCCATGAGAGAGAAGGAGAGAGATCTGTCT
                      ____________________________________________________________
consensus             TTGTGCGTGGGAGAGGTACGAGCGGAGGAAGCCATGAGAGAGAAGGAGAGAGATCTGTCT
 
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JMSF041I21+           CTGCTGCTGCTGCTTCTAGAAGGCGAAGAGAGACAAATAGGATGGAAATGGAAGAGAGAA
JMSF051N24+           CTGCTGCTGCTGCTTCTAGAAGGCGAAGAGAGACAAATAGGATGGAAATGGAAGAGAGAA
                      ____________________________________________________________
consensus             CTGCTGCTGCTGCTTCTAGAAGGCGAAGAGAGACAAATAGGATGGAAATGGAAGAGAGAA
 
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JMSF041I21+           AACGGGAAAGAAGTAAAGGCATTTAAGGAAGGAATAGAGAAGGGGGGTCCCAAACAAGTG
JMSF051N24+           AACGGGAAAGAAGTAAAGGCATTTAAGGAAGGAATAGAGAAGGGGGGTCCCAAACAAGTG
                      ____________________________________________________________
consensus             AACGGGAAAGAAGTAAAGGCATTTAAGGAAGGAATAGAGAAGGGGGGTCCCAAACAAGTG
 
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JMSF041I21+           TCCGCCATAATTCCCCTCCCGCACAACCCACGCCAACATACCAAAGACCAAAATGTTACC
JMSF051N24+           TCCGCCATAATTCCCCTCCCGCACAACCCACGCCAACATACCAAAGACCAAAATGTTACC
                      ____________________________________________________________
consensus             TCCGCCATAATTCCCCTCCCGCACAACCCACGCCAACATACCAAAGACCAAAATGTTACC