Contig 002482:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023A14Sequence409002482 (4)295015927
JMFF031F04Sequence624002482 (4)395011438 (4)ref|XP_006353366.1|4e-10PREDICTED: BAG family molecular chaperone regulator 1-like [Solanum tuberosum]
JMFF032B12Sequence548002482 (4)378011438 (4)ref|XP_006353366.1|2e-08PREDICTED: BAG family molecular chaperone regulator 1-like [Solanum tuberosum]
JMSF051H17Sequence691002482 (4)628011438 (4)ref|XP_006353366.1|7e-39PREDICTED: BAG family molecular chaperone regulator 1-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFF032B12+                                                                     TT
JMSF051H17+                                       CGGCGCCGGCGCCGGCAACAGAACCCGTGGTT
                      ____________________________________________________________
consensus                                         CGGCGCCGGCGCCGGCAACAGAACCCGTGGTT
 
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JMFF031F04+                               CTATCTTCATTCGCATCATCTTGATTTAGCTCGGCGCCGG
JMFF032B12+           CACCGGCTGAGCAACGGTTCCTATCTTCATTCGCATCATCTTGATTTAGCTCGGCGCCGG
JMSF051H17+           CACCGGCTGAGCAACGGTTCCTATCTTCATTCGCATCATCTTGATTTAGCTCGGCGCCGG
                      ____________________________________________________________
consensus             CACCGGCTGAGCAACGGTTCCTATCTTCATTCGCATCATCTTGATTTAGCTCGGCGCCGG
 
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JMFF031F04+           AAAAATGCAAGCAGGGGTGTGAGTTCTTGAGAGCGGAGAGATTGGAGGAGCTCAGATCAG
JMFF032B12+           AAAAATGCAAGCAGGGGTGTGAGTTCTTGAGAGCGGAGAGATTGGAGGAGCTCAGATCAG
JMSF051H17+           AAAAATGCAAGCAGGGGTGTGAGTTCTTGAGAGCGGAGAGATTGGAGGAGCTCAGATCAG
                      ____________________________________________________________
consensus             AAAAATGCAAGCAGGGGTGTGAGTTCTTGAGAGCGGAGAGATTGGAGGAGCTCAGATCAG
 
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JMFF031F04+           AGCCATTGACTTCTCGCCGGCGCGATCTACAGAGCTGAAAGAGATATCCATATCTCGCGA
JMFF032B12+           AG-CATTGACTTCTCGCCGGCGCGATCTACAGAGCTGAAAGAGATATCCATATCTCGCGA
JMSF051H17+           AG-CATTGACTTCTCGCCGGCGCGATCTACAGAGCTGAAAGAGATATCCATATCTCGCGA
                      ____________________________________________________________
consensus             AG-CATTGACTTCTCGCCGGCGCGATCTACAGAGCTGAAAGAGATATCCATATCTCGCGA
 
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JMFF031F04+           CCCAGTTGCTTTAATGCCTGAACTTGAACAATACACCACTCCAAACAGTATCGTCACGGT
JMFF032B12+           CCCAGTTGCTTTAATGCCTGAACTTGAACAATACACCACTCCAAACAGTATCGTCACGGT
JMFF023A14+                                                                  ACGGT
JMSF051H17+           CCCAGTTGCTTTAATGCCTGAACTTGAACAATACACCACTCCAAACAGTATCGTCACGGT
                      ____________________________________________________________
consensus             CCCAGTTGCTTTAATGCCTGAACTTGAACAATACACCACTCCAAACAGTATCGTCACGGT
 
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JMFF031F04+           TGTGGACAGGGAAAGATTCTATCTTTTTCCTGTATCTTGGCACGACTCCAACAGTAGCGG
JMFF032B12+           TGTGGACAGGGAAAGATTCTATCTTTTTCCTGTATCTTGGCACGACTCCAACAGTAGCGG
JMFF023A14+           TGTGGACAGGGAAAGATTCTATCTTTTTCCTGTATCTTGGCACGACTCCAACAGTAGCGG
JMSF051H17+           TGTGGACAGGGAAAGATTCTATCTTTTTCCTGTATCTTGGCACGACTCCAACAGTAGCGG
                      ____________________________________________________________
consensus             TGTGGACAGGGAAAGATTCTATCTTTTTCCTGTATCTTGGCACGACTCCAACAGTAGCGG
 
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JMFF031F04+           TATGTCAACGTAAACCCAAAAATGGTAAAAGTAACCGAATCCTTGAATCGCCGCCGGGGA
JMFF032B12+           TATGTCAACGTAAACCCAAAAATGGTAAAAGTAACCGAATCCTTGAATCGCCGCCGGGGA
JMFF023A14+           TATGTCAACGTAAACCCAAAAATGGTAAAAGTAACCGAATCCTTGAATCGCCGCCGGGGA
JMSF051H17+           TATGTCAACGTAAACCCAAAAATGGTAAAAGTAACCGAATCCTTGAATCGCCGCCGGGGA
                      ____________________________________________________________
consensus             TATGTCAACGTAAACCCAAAAATGGTAAAAGTAACCGAATCCTTGAATCGCCGCCGGGGA
 
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JMFF031F04+           AGTGTCGGTGCCCAAAAACTCCGGTAAAGAATACGATACTGTGAAGAAAATTTCAGATCC
JMFF032B12+           AGTGTCGGTGCCCAAAAACTCCGGTAAAGAATACGATACTGTGAAGAAAATTTCAGATCC
JMFF023A14+           AGTGTCGGTGCCCAAAAACTCCGGTAAAGAATACGATACTGTGAAGAAAATTTCAGATCC
JMSF051H17+           AGTGTCGGTGCCCAAAAACTCCGGTAAAGAATACGATACTGTGAAGAAAATTTCAGATCC
                      ____________________________________________________________
consensus             AGTGTCGGTGCCCAAAAACTCCGGTAAAGAATACGATACTGTGAAGAAAATTTCAGATCC
 
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JMFF031F04+           TATATATAGGAGACCCAAAAATGCGGTGAAATCTTCTTAATTCGGATGAATTTATTGCCG
JMFF032B12+           TATATATAGGAGACCCAAAAATGCGGTGAAATCTTCTTAATTCGGATGAATTTATTGCCG
JMFF023A14+           TATATATAGGAGACCCAAAAATGCGGTGAAATCTTCTTAATTCGGATGAATTTATTGCCG
JMSF051H17+           TATATATAGGAGACCCAAAAATGCGGTGAAATCTTCTTAATTCGGATGAATTTATTGCCG
                      ____________________________________________________________
consensus             TATATATAGGAGACCCAAAAATGCGGTGAAATCTTCTTAATTCGGATGAATTTATTGCCG
 
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JMFF031F04+           CGAAACTGCTGACACTGTTGCCGGAACAAAATTTTCCGGCGAATTCAACGCCAATGATAA
JMFF032B12+           CGAAACTGCTGACACTGTTGCCGGAACAAAATTTTCCGGCGAATTCAACGCCAATGATAA
JMFF023A14+           CGAAACTGCTGACACTGTTGCCGGAACAAAATTTTCCGGCGAATTCAACGCCAATGATAA
JMSF051H17+           CGAAACTGCTGACACTGTTGCCGGAACAAAATTTTCCGGCGAATTCAACGCCAATGATAA
                      ____________________________________________________________
consensus             CGAAACTGCTGACACTGTTGCCGGAACAAAATTTTCCGGCGAATTCAACGCCAATGATAA
 
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JMFF031F04+           AACAATTATGGAAGGAAAGCTGAGAAAGGAAATCTTTTTTTAAAAAAAATCTGTATTGTG
JMFF032B12+           AACAATT                                                     
JMFF023A14+           AACAATTATGGAAGGAAAGCTGAGAAAGGNAATCTTTTTTTAAAAAAAATCTGTATTGTG
JMSF051H17+           AACAATTATGGAAGGAAAGCTGAGAAAGGAAATCTTTTTTTAAAAAAAATCTGTATTGTG
                      ____________________________________________________________
consensus             AACAATTATGGAAGGAAAGCTGAGAAAGGAAATCTTTTTTTAAAAAAAATCTGTATTGTG
 
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JMFF031F04+           TTTGGTTGCAAAGGCGTAGAAGGGGGAGAAAGAGAAGAACAAA                 
JMFF023A14+           TTTGGTTGCAAAGGCGTAGAAGGGGGAGAAAGAGAAGAACAAA                 
JMSF051H17+           TTTGGTTGCAAAGGCGTAGAAGGGGGAGAAAGAGAAGAACAAAGAGAGAGAAAATACACC
                      ____________________________________________________________
consensus             TTTGGTTGCAAAGGCGTAGAAGGGGGAGAAAGAGAAGAACAAAGAGAGAGAAAATACACC