Contig 002479:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF051D24-                                                               GGATAAG
                      ____________________________________________________________
consensus                                                                  GGATAAG
 
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rJMSF051D24-          GTTTTTCAAAAAAAGAAGAAGGATAAGGCATATAGACATAGCTTTCATCTAAAAAGAGTT
                      ____________________________________________________________
consensus             GTTTTTCAAAAAAAGAAGAAGGATAAGGCATATAGACATAGCTTTCATCTAAAAAGAGTT
 
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rJMSF051D24-          GAATAAGCAAATACATAATAATAATCCCACACATTTTGAGCAAACTCTTAAAACTGTATC
                      ____________________________________________________________
consensus             GAATAAGCAAATACATAATAATAATCCCACACATTTTGAGCAAACTCTTAAAACTGTATC
 
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rJMSF051D24-          CTGCTAGGGTGTTCCTTCTCCATCCTGGTTTCGCCATAAGACTCGTCGTTGTCCATGCGC
                      ____________________________________________________________
consensus             CTGCTAGGGTGTTCCTTCTCCATCCTGGTTTCGCCATAAGACTCGTCGTTGTCCATGCGC
 
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rJMSF051D24-          TTGTTGTGCCTAAACGCTGCACAGGCCACGACATACATTATTACCAGGAAGATTAGGACG
                      ____________________________________________________________
consensus             TTGTTGTGCCTAAACGCTGCACAGGCCACGACATACATTATTACCAGGAAGATTAGGACG
 
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rJMSF051D24-          ACAATGTTGATCACAGACACCTTCCTCCAGCTCTTTTTCAGGCTGCCCAGTACACCCGCT
JMFN028G11+                         AGACACCTTCCTCCAGCTCTTTTTCAGGCTGCCCAGTACACCCGCT
                      ____________________________________________________________
consensus             ACAATGTTGATCACAGACACCTTCCTCCAGCTCTTTTTCAGGCTGCCCAGTACACCCGCT
 
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rJMSF051D24-          TTGCAAGAGTTGCAGTTGTAACAGAGTAGCTGTTGATCGTTGCTCCATCGAACACAGTCC
JMFN028G11+           TTGCAAGAGTTGCAGTTGTAACAGAGTAGCTGTTGGTCGTTGCTCCATCGAACACAGTCC
                      ____________________________________________________________
consensus             TTGCAAGAGTTGCAGTTGTAACAGAGTAGCTGTTGGTCGTTGCTCCATCGAACACAGTCC
 
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rJMSF051D24-          TGGTCAGCTGCCGGTAATCCCCCGTCTGTGCTCCATAACGTCTCGTTCATGTAAACATAG
JMFN028G11+           TGGTCAGCTGCCGGTAATCCCCCGTCTGTGCTCCATAACGTCTCGTTCATGTAAACATAG
                      ____________________________________________________________
consensus             TGGTCAGCTGCCGGTAATCCCCCGTCTGTGCTCCATAACGTCTCGTTCATGTAAACATAG
 
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rJMSF051D24-          TTACATGCCGTGGGGGGTTTGCAACATCCCGACTCAATAGGACTAAGGTGTCTGCGGTAA
JMFN028G11+           TTACATGCCGTGGGGGGTTTGCAACATCCCGACTCAATAGGACTAAGGTGTCTGCGGTAA
                      ____________________________________________________________
consensus             TTACATGCCGTGGGGGGTTTGCAACATCCCGACTCAATAGGACTAAGGTGTCTGCGGTAA
 
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rJMSF051D24-          AACATATCTGCGGTTTCAGGGGCGCCATTAACGAACCTTCTCGTCTTCCCACAGACATGG
JMFN028G11+           AACATATCTGCGGTTTCAGGGGCGCCATTAACGAACCTTCTCGTCTTCCCACAGACATGG
JMSF051D24+                                                        TTCCCACAGACATGG
                      ____________________________________________________________
consensus             AACATATCTGCGGTTTCAGGGGCGCCATTAACGAACCTTCTCGTCTTCCCACAGACATGG
 
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rJMSF051D24-          GAGTCCCTGACGCAAGAACCGATCTTTGACCAGTAGCTCTGAGTGGTGACCCTCTCCTCC
JMFN028G11+           GAGTCCCTGACGCAAGAACCGATCTTTGACCAGTAGCTCTGAGTGGTGACCCTCTCCTCC
JMSF051D24+           GAGTCCCTGACGCAAGAACCGATCTTTGACCAGTAGCTCTGAGTGGTGACCCTCTCCTCC
                      ____________________________________________________________
consensus             GAGTCCCTGACGCAAGAACCGATCTTTGACCAGTAGCTCTGAGTGGTGACCCTCTCCTCC
 
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rJMSF051D24-          AGCCACCCGGAGTAATCCTGGAGATAATACTCCATGTAAGCCCGGTTCATGACGGGTCGA
JMFN028G11+           AGCCACCCGGAGTAATCCTGGAGATAATACTCCATGTAAGCCCGGTTCATGACGGGTCGA
JMSF051D24+           AGCCACCCGGAGTAATCCTGGAGATAATACTCCATGTAAGCCCGGTTCATGACGGGTCGA
                      ____________________________________________________________
consensus             AGCCACCCGGAGTAATCCTGGAGATAATACTCCATGTAAGCCCGGTTCATGACGGGTCGA
 
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rJMSF051D24-          CCCGACCCCTTATCCGTGACGGCATA                                  
JMFN028G11+           CCCGACCCCTTATCCGTGACGGCATAGGCGAAGATGACGAAGCCAATAAGGGCGGCTATG
JMSF051D24+           CCCGACCCCTTATCCGTGACGGCATAGGCGAAGATGACGAAGCCAATAAGGGCGGCTATG
                      ____________________________________________________________
consensus             CCCGACCCCTTATCCGTGACGGCATAGGCGAAGATGACGAAGCCAATAAGGGCGGCTATG
 
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JMFN028G11+           ATGAAGAACATAGCCCAGAGATAAAGGTACATGAGGAAGGTGTTTCTGTAGCAGGCGCCG
JMSF051D24+           ATGAAGAACATAGCCCAGAGATAAAGGTACATGAGGAAGGTGTTTCTGTAGCAGGCGCCG
                      ____________________________________________________________
consensus             ATGAAGAACATAGCCCAGAGATAAAGGTACATGAGGAAGGTGTTTCTGTAGCAGGCGCCG
 
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JMFN028G11+           GCGAAGCCGGCGAGGGAAACCACCATGATGGCCACCCCTATGACTATGATGGGCCACTGC
JMSF051D24+           GCGAAGCCGGCGAGGGAAACCACCATGATGGCCACCCCTATGACTATGATGGGCCACTGC
                      ____________________________________________________________
consensus             GCGAAGCCGGCGAGGGAAACCACCATGATGGCCACCCCTATGACTATGATGGGCCACTGC
 
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JMFN028G11+           AGAAACT                                                     
JMSF051D24+           AGAAACTTTATGCAGTCCGTACTGTTTGCTCTGCTGCTCAGCCATATCCCGCCGCCCAGT
                      ____________________________________________________________
consensus             AGAAACTTTATGCAGTCCGTACTGTTTGCTCTGCTGCTCAGCCATATCCCGCCGCCCAGT
 
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JMSF051D24+           ATCGGGATTGACGCCAGGAAGGTCAAGAAGTTCATCAGACCTATCAAATGGTTGCTGGTT
                      ____________________________________________________________
consensus             ATCGGGATTGACGCCAGGAAGGTCAAGAAGTTCATCAGACCTATCAAATGGTTGCTGGTT
 
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JMSF051D24+           CTCATGGCTTTTTGCCCTTGTTTTTAGTTTCTCACTGTTGCCGGAGGTGAAGACGGCGGC
                      ____________________________________________________________
consensus             CTCATGGCTTTTTGCCCTTGTTTTTAGTTTCTCACTGTTGCCGGAGGTGAAGACGGCGGC
 
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JMSF051D24+           GGGTAGAGGCTGAGGGCGGTGAGGGTTGAAGGGAAAGGAGTGGGGACTGGGGAGAGAGAG
                      ____________________________________________________________
consensus             GGGTAGAGGCTGAGGGCGGTGAGGGTTGAAGGGAAAGGAGTGGGGACTGGGGAGAGAGAG
 
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JMSF051D24+           GGGGAAGTGGGTTAATGGACAGGCGGTAATGCTGAGTGAGTGACAAGACTAGTGGTGACC
                      ____________________________________________________________
consensus             GGGGAAGTGGGTTAATGGACAGGCGGTAATGCTGAGTGAGTGACAAGACTAGTGGTGACC