Contig 002475:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF051A18Sequence653002475 (2)ref|XP_009628858.1|6e-43PREDICTED: UPF0586 protein C9orf41 homolog [Nicotiana tomentosiformis]714004416 (2)ref|XP_006429749.1|3e-114hypothetical protein CICLE_v10011552mg [Citrus clementina] gb|ESR42989.1| hypoth
JMSF051C17Sequence705002475 (2)ref|XP_009628858.1|3e-46PREDICTED: UPF0586 protein C9orf41 homolog [Nicotiana tomentosiformis]731004416 (2)gb|KDO64325.1|6e-94hypothetical protein CISIN_1g015160mg [Citrus sinensis]

Alignment

This contig is upended


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JMSF051C17+ G
                      ____________________________________________________________
consensus G
 
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JMSF051C17+ GCTCAACCATCTAGGAGACGATGAAGAAATATTCTCATTGCAACTAGCAGAAGGAAATTG
                      ____________________________________________________________
consensus GCTCAACCATCTAGGAGACGATGAAGAAATATTCTCATTGCAACTAGCAGAAGGAAATTG
 
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JMSF051C17+ TTTCCCCAGATCTNGGAATTCCTTACACCAATCATCGCCAACACTATTTGTGTTATTCTG
JMSF051A18+ AGATCTTGGAATTCCTTACACCAATCATCGCCAACACTATTTGTGTTATTCTG
                      ____________________________________________________________
consensus TTTCCCCAGATCTTGGAATTCCTTACACCAATCATCGCCAACACTATTTGTGTTATTCTG
 
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JMSF051C17+ ATGTTTTAAACCACTGCTTAAACTCACA-TCATTCAACTCATTTGAATGCTCAATTTTCT
JMSF051A18+ ATGTTTTAAACCACTGCTTAAACTCACATTCATTCAACTCATTTGAATGCTCAATTTTCT
                      ____________________________________________________________
consensus ATGTTTTAAACCACTGCTTAAACTCACATTCATTCAACTCATTTGAATGCTCAATTTTCT
 
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JMSF051C17+ CCTC----------CTTAATAGCAACACATGTCCCAGAAATACCACCACCATGTTCCTCA
JMSF051A18+ CCTCCTGTGGTGGTCTTAATAGCAACACATGTCCCAGAAATACCACCACCATGTTCCTCA
                      ____________________________________________________________
consensus CCTCCTGTGGTGGTCTTAATAGCAACACATGTCCCAGAAATACCACCACCATGTTCCTCA
 
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JMSF051C17+ GAGCTTGGTTTAACAGATTCCTTACAGTTCAGTCCACAACATCTAGTTGTGATGTTATCT
JMSF051A18+ GAGCTTGGTTTAACAGATTCCTTACAGTTCAGTCCACAACATCTAGTTGTGATGTTATCT
                      ____________________________________________________________
consensus GAGCTTGGTTTAACAGATTCCTTACAGTTCAGTCCACAACATCTAGTTGTGATGTTATCT
 
. : . : . : . : . : . :
JMSF051C17+ AGATGTTGGTCTTGGCAAATATCAGTATCCTGGCTCAAATCTAGTGGGGGCTCAAATGCC
JMSF051A18+ AGATGTTGGTCTTGGCAAATATCAGTATCCTGGCTCAAATCTAGTGGGGGCTCAAATGCC
                      ____________________________________________________________
consensus AGATGTTGGTCTTGGCAAATATCAGTATCCTGGCTCAAATCTAGTGGGGGCTCAAATGCC
 
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JMSF051C17+ TTCAGCATTTCGAATATGAAATATGAATTTTGAGCAATACACCATCTAAGTTTCTGAAAC
JMSF051A18+ TTCAGCATTTCGAATATGAAATATGAATTTTGAGCAATACACCATCTAAGTTTCTGAAAC
                      ____________________________________________________________
consensus TTCAGCATTTCGAATATGAAATATGAATTTTGAGCAATACACCATCTAAGTTTCTGAAAC
 
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JMSF051C17+ TTCAAAGGGAGATGAGATAGGATAACCTTGTGTGCTTGTGGTAACTTTCTGAAAGATCTT
JMSF051A18+ TTCAAAGGGAGATGAGATAGGATAACCTTGTGTGCTTGTGGTAACTTTCTGAAAGATCTT
                      ____________________________________________________________
consensus TTCAAAGGGAGATGAGATAGGATAACCTTGTGTGCTTGTGGTAACTTTCTGAAAGATCTT
 
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JMSF051C17+ TCATATCTTTTTATATCTTCCTCCGAAGCTTCAGGATAGTTGATGTATGCGCTAATGATG
JMSF051A18+ TCATATCTTTTTATATCTTCCTCCGAAGCTTCAGGATAGTTGATGTATGCGCTAATGATG
                      ____________________________________________________________
consensus TCATATCTTTTTATATCTTCCTCCGAAGCTTCAGGATAGTTGATGTATGCGCTAATGATG
 
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JMSF051C17+ CGCCTTAGGGCTTTAACTTCTAAGGCTTCTTCGAGTTTCCTCCGACGCTCCACGGCTTCA
JMSF051A18+ CGCCTTAGGGCTTTAACTTCTAAGGCTTCTTCGAGTTTCCTCCGACGCTCCACGGCTTCA
                      ____________________________________________________________
consensus CGCCTTAGGGCTTTAACTTCTAAGGCTTCTTCGAGTTTCCTCCGACGCTCCACGGCTTCA
 
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JMSF051C17+ GCTTCGGCTTCGGCTTCGGTGTTCAACATTTCCGACGACCCCTCTTCGACTGTATCTCCG
JMSF051A18+ GCTTCGGCTTCGGCTTCGGTGTTCAACATTTCCGACGACCCCTCTTCGACTGTATCTCCG
                      ____________________________________________________________
consensus GCTTCGGCTTCGGCTTCGGTGTTCAACATTTCCGACGACCCCTCTTCGACTGTATCTCCG
 
. : . : . : . : . : . :
JMSF051C17+ ACAGAGTATGCTGCTACAGTTCAACCTGTTGAATGGAAATCCCCTTCAATCTTC
JMSF051A18+ ACAGAGTATGCTGCTACAGTTCAACCTGTTGAATGGAAATCCCCTTCAATCTTCAGGCTC
                      ____________________________________________________________
consensus ACAGAGTATGCTGCTACAGTTCAACCTGTTGAATGGAAATCCCCTTCAATCTTCAGGCTC