Contig 002473:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF050M15Sequence664002473 (2)ref|XP_009609801.1|1e-10PREDICTED: BTB/POZ and MATH domain-containing protein 3-like [Nicotiana tomento770007249 (2)ref|XP_006432761.1|4e-11hypothetical protein CICLE_v10003799mg, partial [Citrus clementina] gb|ESR46001.
JMSF050O19Sequence638002473 (2)ref|XP_009609801.1|1e-10PREDICTED: BTB/POZ and MATH domain-containing protein 3-like [Nicotiana tomento758007249 (2)ref|XP_006432761.1|4e-11hypothetical protein CICLE_v10003799mg, partial [Citrus clementina] gb|ESR46001.

Alignment

This contig is upended


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JMSF050M15+                                                                   GTGG
                      ____________________________________________________________
consensus                                                                     GTGG
 
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JMSF050O19+                                 TTAGGTACAGAGAGATGTGATCATTAACCTTCTTGTTT
JMSF050M15+           AGGTTGCTTGTGTCCGCCAGTTTTAGGTACAGAGAGATGTGATCATTAACCTTCTTGTTT
                      ____________________________________________________________
consensus             AGGTTGCTTGTGTCCGCCAGTTTTAGGTACAGAGAGATGTGATCATTAACCTTCTTGTTT
 
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JMSF050O19+           TTGTTTCCATTTGGGTGGATAACCAACTTCCTGCAAACGCAAATCAAACCAATTCAGACA
JMSF050M15+           TTGTTTCCATTTGGGTGGATAACCAACTTCCTGCAAACGCAAATCAAACCAATTCAGACA
                      ____________________________________________________________
consensus             TTGTTTCCATTTGGGTGGATAACCAACTTCCTGCAAACGCAAATCAAACCAATTCAGACA
 
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JMSF050O19+           GTCGGCTGAATAACCACAATGTTATAAGTTTAACTGTCCAGTGTGAGTAGTTATGGGACA
JMSF050M15+           GTCGGCTGAATAACCACAATGTTATAAGTTTAACTGTCCAGTGTGAGTAGTTATGGGACA
                      ____________________________________________________________
consensus             GTCGGCTGAATAACCACAATGTTATAAGTTTAACTGTCCAGTGTGAGTAGTTATGGGACA
 
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JMSF050O19+           TTTTGGTTTAACCCGGTCACTTGAACAGTTATGTTGCAACATAAATTAATTTACCTCTTT
JMSF050M15+           TTTTGGTTTAACCCGGTCACTTGAACAGTTATGTTGCAACATAAATTAATTTACCTCTTT
                      ____________________________________________________________
consensus             TTTTGGTTTAACCCGGTCACTTGAACAGTTATGTTGCAACATAAATTAATTTACCTCTTT
 
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JMSF050O19+           GCAGTCTGATTAGGGTCATATGGTAAAGTTTATTCAGTGCACACCCTCTAATGTTAACTG
JMSF050M15+           GCAGTCTGATTAGGGTCATATGGTAAAGTTTATTCAGTGCACACCCTCTAATGTTAACTG
                      ____________________________________________________________
consensus             GCAGTCTGATTAGGGTCATATGGTAAAGTTTATTCAGTGCACACCCTCTAATGTTAACTG
 
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JMSF050O19+           CAAGTGGCCTATTGGCCTTTTTTGTTTATCAGTTATAAGCAACCTAAACTAGTTTACTTT
JMSF050M15+           CAAGTGGCCTATTGGCCTTTTTTGTTTATCAGTTATAAGCAACCTAAACTAGTTTACTTT
                      ____________________________________________________________
consensus             CAAGTGGCCTATTGGCCTTTTTTGTTTATCAGTTATAAGCAACCTAAACTAGTTTACTTT
 
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JMSF050O19+           CTTGTGGTCCAGTTAAGGTCACAAAGAATGATTTATCTGGTGTACACTTTCGGAAAGTTT
JMSF050M15+           CTTGTGGTCCAGTTAAGGTCACAAAGAATGATTTATCTGGTGTACACTTTCGGAAAGTTT
                      ____________________________________________________________
consensus             CTTGTGGTCCAGTTAAGGTCACAAAGAATGATTTATCTGGTGTACACTTTCGGAAAGTTT
 
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JMSF050O19+           GATGGTAAGTTAAGTTAGTTAATTACCATTTGTAGCCTCCGACATCAAAAGCATCTGAAA
JMSF050M15+           GATGGTAAGTTAAGTTAGTTAATTACCATTTGTAGCCTCCGACATCAAAAGCATCTGAAA
                      ____________________________________________________________
consensus             GATGGTAAGTTAAGTTAGTTAATTACCATTTGTAGCCTCCGACATCAAAAGCATCTGAAA
 
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JMSF050O19+           TGTATTGGTCTATGTTGTTCCTGAGCAATGACACCGATTGAATCTTGACCACGTAGTGAC
JMSF050M15+           TGTATTGGTCTATGTTGTTCCTGAGCAATGACACCGATTGAATCTTGACCACGTAGTGAC
                      ____________________________________________________________
consensus             TGTATTGGTCTATGTTGTTCCTGAGCAATGACACCGATTGAATCTTGACCACGTAGTGAC
 
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JMSF050O19+           TGGGGGGTGCGTCTGAAACTGTTTTCACAATTCCTTCTTCCTTTGGGGTATCAGCCATGG
JMSF050M15+           TGGGGGGTGCGTCTGAAACTGTTTTCACAATTCCTTCTTCCTTTGGGGTATCAGCCATGG
                      ____________________________________________________________
consensus             TGGGGGGTGCGTCTGAAACTGTTTTCACAATTCCTTCTTCCTTTGGGGTATCAGCCATGG
 
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JMSF050O19+           AAAATAATTACTTTGCTATAAATATATATTAATTGAGAGTTTGTGTGGTTTGAGTTTACC
JMSF050M15+           AAAATAATTACTTTGCTATAAATATATATTAATTGAGAGTTTGTGTGGTTTGAGTTTACC
                      ____________________________________________________________
consensus             AAAATAATTACTTTGCTATAAATATATATTAATTGAGAGTTTGTGTGGTTTGAGTTTACC