| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030F01 | Sequence | 394 | 002472 (3) | ref|XP_009623873.1| | 3e-21 | PREDICTED: suppressor of mec-8 and unc-52 protein homolog 2 [Nicotiana tomentos | |||||
| JMSF050L18 | Sequence | 690 | 002472 (3) | ref|XP_009623873.1| | 5e-85 | PREDICTED: suppressor of mec-8 and unc-52 protein homolog 2 [Nicotiana tomentos | 763 | 005840 (3) | ref|XP_010258660.1| | 1e-95 | PREDICTED: suppressor of mec-8 and unc-52 protein homolog 2 [Nelumbo nucifera] |
| JMSF052B15 | Sequence | 716 | 002472 (3) | ref|XP_009623873.1| | 8e-95 | PREDICTED: suppressor of mec-8 and unc-52 protein homolog 2 [Nicotiana tomentos | 889 | 005840 (3) | ref|XP_010258660.1| | 1e-122 | PREDICTED: suppressor of mec-8 and unc-52 protein homolog 2 [Nelumbo nucifera] |
This contig is upended
. : . : . : . : . : . :
JMSF052B15+ TNTAAGACAGAGC
____________________________________________________________
consensus TNTAAGACAGAGC
. : . : . : . : . : . :
JMSF052B15+ CATCAACACCGACAGTAACCATTTCCTCGGGGACAGGACAGTCAGCTTTACTCCTGTGGA
JMSF050L18+ GGACAGGACAGTCAGCTTTACTCCTGTGGA
____________________________________________________________
consensus CATCAACACCGACAGTAACCATTTCCTCGGGGACAGGACAGTCAGCTTTACTCCTGTGGA
. : . : . : . : . : . :
JMSF052B15+ CAGTCGTGGGAATATCATTGGAAAATCCACTTTCCATGTTAAAAATAAAAGCCATCCTTC
JMSF050L18+ CAGTCGTGGGAATATCATTGGAAAATCCACTTTCCATGTTAAAAATAAAAGCCATCCTTC
____________________________________________________________
consensus CAGTCGTGGGAATATCATTGGAAAATCCACTTTCCATGTTAAAAATAAAAGCCATCCTTC
. : . : . : . : . : . :
JMSF052B15+ CAGGAAGGAACATTTCATTGGTCTTTACAACAGTCGGGGGCTTGACTATCCACTTGTAGA
JMSF050L18+ CAGGAAGGAACATTTCATTGGTCTTTACAACAGTCGGGGGCTTGACTATCCACTTGTAGA
____________________________________________________________
consensus CAGGAAGGAACATTTCATTGGTCTTTACAACAGTCGGGGGCTTGACTATCCACTTGTAGA
. : . : . : . : . : . :
JMSF052B15+ CTGACTTTGCAGTGGCAGTGCGGAAAGCAAGTGTTTGATCTTCCTTTGATGCTCTAGATT
JMSF050L18+ CTGACTTTGCAGTGGCAGTGCGGAAAGCAAGTGTTTGATCTTCCTTTGATGCTCTAGATT
____________________________________________________________
consensus CTGACTTTGCAGTGGCAGTGCGGAAAGCAAGTGTTTGATCTTCCTTTGATGCTCTAGATT
. : . : . : . : . : . :
JMSF052B15+ TTCCATCAGAATCATCTCCAACATCTGGCTTCTTATCTATTTCACTTCTCACTTTATGAA
JMSF050L18+ TTCCATCAGAATCATCTCCAACATCTGGCTTCTTATCTATTTCACTTCTCACTTTATGAA
____________________________________________________________
consensus TTCCATCAGAATCATCTCCAACATCTGGCTTCTTATCTATTTCACTTCTCACTTTATGAA
. : . : . : . : . : . :
JMSF052B15+ GCAAAGCATAATCCAATCCTTTAACCAAGTGCGTGTGCTCCACATCACCTCCAAGATACT
JMFF030F01+ AACCAAGTGCGTGTGCTCCACATCACCTCCAAGATACT
JMSF050L18+ GCAAAGCATAATCCAATCCTTTAACCAAGTGCGTGTGCTCCACATCACCTCCAAGATACT
____________________________________________________________
consensus GCAAAGCATAATCCAATCCTTTAACCAAGTGCGTGTGCTCCACATCACCTCCAAGATACT
. : . : . : . : . : . :
JMSF052B15+ TGCTCTTCTCAATAGATAACTTGTGAGCATCAGCACCGATATCCGTACCGGGAGGACGAA
JMFF030F01+ TGCTCTTCTCAATAGATAACTTGTGAGCATCAGCACCGATATCCGTACCGGGAGGACGAA
JMSF050L18+ TGCTCTTCTCAATAGATAACTTGTGAGCATCAGCACCGATATCCGTACCGGGAGGACGAA
____________________________________________________________
consensus TGCTCTTCTCAATAGATAACTTGTGAGCATCAGCACCGATATCCGTACCGGGAGGACGAA
. : . : . : . : . : . :
JMSF052B15+ CGTTATGATAGGCACCCGATTCCACGTAATCGGGATTTTGATCCTCCCTCCTCTCTTTGG
JMFF030F01+ CGTTATGATAGGCACCCGATTCCACGTAATCGGGATTTTGATCCTCCCTCCTCTCTTTGG
JMSF050L18+ CGTTATGATAGGCACCCGATTCCACGTAATCGGGATTTTGATCCTCCCTCCTCTCTTTGG
____________________________________________________________
consensus CGTTATGATAGGCACCCGATTCCACGTAATCGGGATTTTGATCCTCCCTCCTCTCTTTGG
. : . : . : . : . : . :
JMSF052B15+ CTCTGTCTCTGTACTTGGGTTGCTCTGGTTCTTCTGCTTTCTCCTCTTTGTTGCGACGAA
JMFF030F01+ CTCTGTCTCTGTACTTGGGTTGCTCTGGTTCTTCTGCTTTCTCCTCTTTGTTGCGACGAA
JMSF050L18+ CTCTGTCTCTGTACTTGGGTTGCTCTGGTTCTTCTGCTTTCTCCTCTTTGTTGCGACGAA
____________________________________________________________
consensus CTCTGTCTCTGTACTTGGGTTGCTCTGGTTCTTCTGCTTTCTCCTCTTTGTTGCGACGAA
. : . : . : . : . : . :
JMSF052B15+ TTATCTTCTCTTTGTGATTTCGCTTCGAGGCTGTCATCTTCGAAACAGTCTCGACGAATC
JMFF030F01+ TTATCTTCTCTTTGTGATTTCGCTTCGAGGCTGTCATCTTCGAAACAGTCTCGACGAATC
JMSF050L18+ TTATCTTCTCTTTGTGATTTCGCTTCGAGGCTGTCATCTTCGAAACAGTCTCGACGAATC
____________________________________________________________
consensus TTATCTTCTCTTTGTGATTTCGCTTCGAGGCTGTCATCTTCGAAACAGTCTCGACGAATC
. : . : . : . : . : . :
JMSF052B15+ ACCAGTGCGGCTGATTTCAGACGAAAAATTAAATTTACCAGATTAAATTAACCACTCTGG
JMFF030F01+ ACCAGTGCGGCTGATTTCAGACGAAAAATTAAATTTACCAGATTAAATTAACCACTCTGG
JMSF050L18+ ACCAGTGCGGCTGATTTCAGACGAAAAATTAAATTTACCAGATTAAATTAACCACTCTGG
____________________________________________________________
consensus ACCAGTGCGGCTGATTTCAGACGAAAAATTAAATTTACCAGATTAAATTAACCACTCTGG
. : . : . : . : . : . :
JMSF052B15+ ACAAAAGTTACATAGCAGAGTTCGAAGCTCGCTCGTCCGCTC
JMFF030F01+ ACAAAAGTTACATAGCAGAGTTCGAAGCTCGCTCGTCCGCTCACTGGTTCCCGAAC
JMSF050L18+ ACAAAAGTTACATAGCAGAGTTCGAAGCTCGCTCGTCCGCTCACTGGTTCCCGAACAATC
____________________________________________________________
consensus ACAAAAGTTACATAGCAGAGTTCGAAGCTCGCTCGTCCGCTCACTGGTTCCCGAACAATC