Contig 002468:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN032A15-                       CCATATGGGTGTGACTGTGAAGGAATCATCACANNGCCTGGTTGCAAC
                      ____________________________________________________________
consensus                         CCATATGGGTGTGACTGTGAAGGAATCATCACANNGCCTGGTTGCAAC
 
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JMFN032A15-           AAAGGAGTAGAGGTTCAGAGTTGTTCAGAAAAGAAGGCACCTGCAAATACAACACCCACA
                      ____________________________________________________________
consensus             AAAGGAGTAGAGGTTCAGAGTTGTTCAGAAAAGAAGGCACCTGCAAATACAACACCCACA
 
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JMFN032A15-           GCTGTGCCCAACAACACCTCTCAGAAAAGGACTGCTGCTGCTCCAGTTGTGGGGTGGCCT
rJMSF018B16+                      AACACCTCTCAGAAAAGGACTGCTGCTGCTCCAGTTGTGGGGTGGCCT
                      ____________________________________________________________
consensus             GCTGTGCCCAACAACACCTCTCAGAAAAGGACTGCTGCTGCTCCAGTTGTGGGGTGGCCT
 
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JMFN032A15-           CCACTGCGTTCGTTTAGGAAGAATCTTGCGAGTAGCAGCAGCTCTCAGAAGCCAGTTTCT
rJMSF018B16+          CCACTGCGTTCGTTTAGGAAGAATCTTGCGAGTAGCAGCAGCTCTCAGAAGCCAGTTTCT
rJMFF020C04+             CTGCGTTCGTTTAGGAAGAATCTTGCGAGTAGCAGCAGCTCTCAGAAGCCAGTTTCT
                      ____________________________________________________________
consensus             CCACTGCGTTCGTTTAGGAAGAATCTTGCGAGTAGCAGCAGCTCTCAGAAGCCAGTTTCT
 
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JMFN032A15-           GAGGCGCAAAATGTGGTCCCAAACAAGGCTTCCAGTGAAAAACCCATGGAAAGTAACCCG
rJMSF018B16+          GAGGCGCAAAATGTGGTCCCAAACAAGGCTTCCAGTGAAAAACCCATGGAAAGTAACCCG
rJMFF020C04+          GAGGCGCAAAATGTGGTCCCAAACAAGGCTTCCAGTGAAAAACCCATGGAAAGTAACCCG
                      ____________________________________________________________
consensus             GAGGCGCAAAATGTGGTCCCAAACAAGGCTTCCAGTGAAAAACCCATGGAAAGTAACCCG
 
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JMFN032A15-           AAAGGCTTGTTTGTTAAGATCAACATGGATGGGGTTCCCATTGGAAGGAAAGTGGACCTT
rJMSF018B16+          AAAGGCTTGTTTGTTAAGATCAACATGGATGGGGTTCCCATTGGAAGGAAAGTGGACCTT
rJMFF020C04+          AAAGGCTTGTTTGTTAAGATCAACATGGATGGGGTTCCCATTGGAAGGAAAGTGGACCTT
                      ____________________________________________________________
consensus             AAAGGCTTGTTTGTTAAGATCAACATGGATGGGGTTCCCATTGGAAGGAAAGTGGACCTT
 
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JMFN032A15-           AAAGCCTATGACAGCTATGACAAGCTTTCCTCCGCTGTTGATGAACTGTTTAGAGGACTT
rJMSF018B16+          AAAGCCTATGACAGCTATGACAAGCTTTCCTCCGCTGTTGATGAACTGTTTAGAGGACTT
rJMFF020C04+          AAAGCCTATGACAGCTATGACAAGCTTTCCTCCGCTGTTGATGAACTGTTTAGAGGACTT
                      ____________________________________________________________
consensus             AAAGCCTATGACAGCTATGACAAGCTTTCCTCCGCTGTTGATGAACTGTTTAGAGGACTT
 
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JMFN032A15-           CTTGCAGCGCAAAATGAACCTTGTGCTGGTGGAAAATGGAACAAGGAAGACGGGGAGAAA
rJMSF018B16+          CTTGCAGCGCAAAATGAACCTTGTGCTGGTGGAAAATGGAACAAGGAAGACGGGGAGAAA
rJMFF020C04+          CTTGCAGCGCAAAATGAACCTTGTGCTGGTGGAAAATGGAACAAGGAAGACGGGGAGAAA
                      ____________________________________________________________
consensus             CTTGCAGCGCAAAATGAACCTTGTGCTGGTGGAAAATGGAACAAGGAAGACGGGGAGAAA
 
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JMFN032A15-           GCCATTACTGGGCTTCTGGATGGGAGCGGTGAATATACTCTTGTTTATGAGGATAATGAA
rJMSF018B16+          GCCATTACTGGGCTTCTGGATGGGAGCGGGGAATATACTCTTGTTTATGAGGATAATGAA
rJMFF020C04+          GCCATTACTGGGCTTCTGGATGGGAGCGGGGAATATACTCTTGTTTATGAGGATAATGAA
                      ____________________________________________________________
consensus             GCCATTACTGGGCTTCTGGATGGGAGCGGGGAATATACTCTTGTTTATGAGGATAATGAA
 
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JMFN032A15-           GGGGACAGGATGCTTGTTGGGGATGTCCCTTGGCACATGTTCGTGTCTGCTGTGAAGAGG
rJMSF018B16+          GGGGACAGGATGCTTGTTGGGGATGTCCCTTGGCACATGTTCGTGTCTGCTGTGAAGAGG
rJMFF020C04+          GGGGACAGGATGCTTGTTGGGGATGTCCCTTGGCACATGTTCGTGTCTGCTGTGAAGAGG
                      ____________________________________________________________
consensus             GGGGACAGGATGCTTGTTGGGGATGTCCCTTGGCACATGTTCGTGTCTGCTGTGAAGAGG
 
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JMFN032A15-           CTGCGGGTGTTGAAAAGCTCTGAACTTTCCACGCTA                        
rJMSF050F16+                GTGTTGAAAAGCTCTGAACTTTCCACGCTAAGATGTGGGAAGCAGGTGAAGCTT
rJMSF018B16+          CTGCGGGTGTTGAAAAGCTCTGAACTTTCCACGCTAAGATGTGGGAAGCAGGTGAAGCTT
rJMFF020C04+          CTGCGGGTGTTGAAAAGCTCTGAACTTTCCACGCTAAGATGTGGGAAGCAGGTGAAGCTT
JMSF050F16-                 GTGTTGAAAAGCTCTGAACTTTCCACGCTAAGATGTGGGAAGCAGGTGAAGCTT
                      ____________________________________________________________
consensus             CTGCGGGTGTTGAAAAGCTCTGAACTTTCCACGCTAAGATGTGGGAAGCAGGTGAAGCTT
 
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rJMSF050F16+          TGAGGTTTAGGAAGATGAAGCAGCAGCCATTTGTTTCTGCAACTCTGACATATTAGAGAG
rJMSF018B16+          TGAGGTTTAGGAAGATGAAGCAGCAGCCATTTGTTTCTGCAACTCTGACATATTAGAGAG
rJMFF020C04+          TGAGGTTTAGGAAGATGAAGCAGCAGCCATTTGTTTCTGCAACTCTGACATATTAGAGAG
JMSF050F16-           TGAGGTTTAGGAAGATGAAGCAGCAGCCATTTGTTTCTGCAACTCTGACATATTAGAGAG
                      ____________________________________________________________
consensus             TGAGGTTTAGGAAGATGAAGCAGCAGCCATTTGTTTCTGCAACTCTGACATATTAGAGAG
 
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rJMSF050F16+          AGCAAAATTGATGGTGTTTGAGCAGAAAGAGATTGTATGTAGATTATTATGACTTTTGGA
rJMSF018B16+          AGCAAAATTGATGGTGTTTGAGCAGAAAGAGATTGTATGTAGATTATTATGACTTTTGGA
rJMFF020C04+          AGCAAAATTGATGGTGTTTGAGCAGAAAGAGATTGTATGTAGATTATTATGACTTTTGGA
JMSF050F16-           AGCAAAATTGATGGTGTTTGAGCAGAAAGAGATTGTATGTAGATTATTATGACTTTTGGA
                      ____________________________________________________________
consensus             AGCAAAATTGATGGTGTTTGAGCAGAAAGAGATTGTATGTAGATTATTATGACTTTTGGA
 
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rJMSF050F16+          TTTGGGATGATATGATAATTTTCACTTGCCTTTATTATTATTATTATACTTT        
rJMSF018B16+          TTTGGGATGATATGATAATTTTCACTTGCCTTTATTATTATTATTATACTTTTGGATTAT
rJMFF020C04+          TTTGGGATGATATGATAATTTTCACTTGCCTTTATTATTATTATTATACTTTTGGATTAT
JMSF050F16-           TTTGGGATGATATGATAATTTTCACTTGCCTTTATTATTATTATTATACTTTTGGATTAT
                      ____________________________________________________________
consensus             TTTGGGATGATATGATAATTTTCACTTGCCTTTATTATTATTATTATACTTTTGGATTAT
 
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rJMSF018B16+          AGTCTTCTCCCAAAAGTTAGCTGTGTATGAAAAAACAGA                     
rJMFF020C04+          AGTCTTCTCCCAAAAGTTAGCTGTGTATGAAAAAACAGACAACCAGAT            
JMSF050F16-           AGTCTTCTCCCAAAAGTTAGCTGTGTATGAAAAAACAGACAACCAGATCCAAAAAAAAAA
                      ____________________________________________________________
consensus             AGTCTTCTCCCAAAAGTTAGCTGTGTATGAAAAAACAGACAACCAGATCCAAAAAAAAAA