Contig 002465:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN010P06+                                                                 TTTGTG
                      ____________________________________________________________
consensus                                                                   TTTGTG
 
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JMFN010P06+           TGTGCTACTAGCTAGCTAGCAGGAGGATACTTATCTGTTGTGTAGAGGGTTGGGGCCTGT
rJMSF050C09-                                          ATCTGTTGTGTAGAGGGTTGGGGCCTGT
                      ____________________________________________________________
consensus             TGTGCTACTAGCTAGCTAGCAGGAGGATACTTATCTGTTGTGTAGAGGGTTGGGGCCTGT
 
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JMFN010P06+           ACGGACTTTCCTCTTATCCCCACCAAAAATGTCATTATCCCCCCCAAGCTCCAAACTGGG
rJMSF050C09-          ACGGACTTTCCTCTTATCCCCACCAAAAATGTCATTATCCCCCCCAAGCTCCAAACTGGG
                      ____________________________________________________________
consensus             ACGGACTTTCCTCTTATCCCCACCAAAAATGTCATTATCCCCCCCAAGCTCCAAACTGGG
 
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JMFN010P06+           AATATTTCTCTTCTTCATCTTCATCTTCATCATGTTCTTTCCATGGTGGGATTTCATCAC
rJMSF050C09-          AATATTTCTCTTCTTCATCTTCATCTTCATCATGTTCTTTCCATGGTGGGATTTCATCAC
                      ____________________________________________________________
consensus             AATATTTCTCTTCTTCATCTTCATCTTCATCATGTTCTTTCCATGGTGGGATTTCATCAC
 
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JMFN010P06+           TGCAGAAGCAGAAGCAGAAGAAGAAGAAGAAGGTGCAGAGTTTATGGGTTTGAATCTGTA
rJMSF050C09-          TGCAGAAGCAGAAGCAGAAGAAGAAGAAGAAGGTGCAGAGTTTATGGGTTTGAATCTGTA
JMSF050C09+                                       GAAGGTGCAGAGTTTATGGGTTTGAATCTGTA
                      ____________________________________________________________
consensus             TGCAGAAGCAGAAGCAGAAGAAGAAGAAGAAGGTGCAGAGTTTATGGGTTTGAATCTGTA
 
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JMFN010P06+           GAATTTGACAGTGCCATTATCTGCATAGCATGGGGCTTTAAACTGCAGAAGCATGAGAAG
rJMSF050C09-          GAATTTGACAGTGCCATTATCTGCATAGCATGGGGCTTTAAACTGCAGAAGCATGAGAAG
JMSF050C09+           GAATTTGACAGTGCCATTATCTGCATAGCATGGGGCTTTAAACTGCAGAAGCATGAGAAG
                      ____________________________________________________________
consensus             GAATTTGACAGTGCCATTATCTGCATAGCATGGGGCTTTAAACTGCAGAAGCATGAGAAG
 
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JMFN010P06+           AAGAAAAAGGCACACACAAACCAAACTCATCTGATGTTTCTTGCTAAGACAGTACCAAGT
rJMSF050C09-          AAGAAAAAGGCACACACAAACCAAACTCATCTGATGTTTCTTGCTAAGACAGTACCAAGT
JMSF050C09+           AAGAAAAAGGCACACACAAACCAAACTCATCTGATGTTTCTTGCTAAGACAGTACCAAGT
                      ____________________________________________________________
consensus             AAGAAAAAGGCACACACAAACCAAACTCATCTGATGTTTCTTGCTAAGACAGTACCAAGT
 
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JMFN010P06+           AGTCATGGCTCCTCAGCTCATGGATGGGCTTTAATTTCTTTCTTTTTCTATCTGTCCACC
rJMSF050C09-          AGTCATGGCTCCTCAGCTCATGGATGGGCTTTAATTTCTTTCTTTTTCTATCTGTCCACC
JMSF050C09+           AGTCATGGCTCCTCAGCTCATGGATGGGCTTTAATTTCTTTCTTTTTCTATCTGTCCACC
                      ____________________________________________________________
consensus             AGTCATGGCTCCTCAGCTCATGGATGGGCTTTAATTTCTTTCTTTTTCTATCTGTCCACC
 
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JMFN010P06+           CTTCCTAGCTGATGAGATGA                                        
rJMSF050C09-          CTTCCTAGCTGATGAGATGAGATAGATGTTCTTGAAATTGGGTTCAGAGACAAGAAGAGC
JMSF050C09+           CTTCCTAGCTGATGAGATGAGATAGATGTTCTTGAAATTGGGTTCAGAGACAAGAAGAGC
                      ____________________________________________________________
consensus             CTTCCTAGCTGATGAGATGAGATAGATGTTCTTGAAATTGGGTTCAGAGACAAGAAGAGC
 
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rJMSF050C09-          AAAAAGATTGGTGTTTTGAGAGAAAGGTAGGAAGGGAATTGGTAAATGGGAAAAACTTTT
JMSF050C09+           AAAAAGATTGGTGTTTTGAGAGAAAGGTAGGAAGGGAATTGGTAAATGGGAAAAACTTTT
                      ____________________________________________________________
consensus             AAAAAGATTGGTGTTTTGAGAGAAAGGTAGGAAGGGAATTGGTAAATGGGAAAAACTTTT
 
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rJMSF050C09-          GGGGATGCCTTGGAGTTTGAAGGTGATGAGGTGGTGCAAAGTCAATTTTGGGGACACATA
JMSF050C09+           GGGGATGCCTTGGAGTTTGAAGGTGATGAGGTGGTGCAAAGTCAATTTTGGGGACACATA
                      ____________________________________________________________
consensus             GGGGATGCCTTGGAGTTTGAAGGTGATGAGGTGGTGCAAAGTCAATTTTGGGGACACATA
 
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rJMSF050C09-          CATACAGTCAATGTATGTGCATAGGTTTTGGTGCTCCCTAATTTTTTTGTTGTGTGAAAT
JMSF050C09+           CATACAGTCAATGTATGTGCATAGGTTTTGGTGCTCCCTAATTTTTTTGTTGTGTGAAAT
                      ____________________________________________________________
consensus             CATACAGTCAATGTATGTGCATAGGTTTTGGTGCTCCCTAATTTTTTTGTTGTGTGAAAT
 
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rJMSF050C09-          TGGGTTATTGTGAGTTGTGTTTTCTTGGGAAACTTTTCTTTCTGATTTCAGAGCCAAAGC
JMSF050C09+           TGGGTTATTGTGAGTTGTGTTTTCTTGGGAAACTTTTCTTTCTGATTTCAGAGCCAAAGC
                      ____________________________________________________________
consensus             TGGGTTATTGTGAGTTGTGTTTTCTTGGGAAACTTTTCTTTCTGATTTCAGAGCCAAAGC
 
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rJMSF050C09-          TCCCCAAACATGATGAAGAGAAATACAGAGACAACCTTTGCACCTAGGATGTTAGATGTA
JMSF050C09+           TCCCCAAACATGATGAAGAGAAATACAGAGACAACCTTTGCACCTAGGATGTTAGATGTA
                      ____________________________________________________________
consensus             TCCCCAAACATGATGAAGAGAAATACAGAGACAACCTTTGCACCTAGGATGTTAGATGTA
 
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rJMSF050C09-          TACTCCTCANATTGAAAAA                                         
JMSF050C09+           TACTCCTCAGATTGAAAAAATTGCTAAGCGCTCTTCAGACATTTAGCGCTTAGACGGCGA
                      ____________________________________________________________
consensus             TACTCCTCAGATTGAAAAAATTGCTAAGCGCTCTTCAGACATTTAGCGCTTAGACGGCGA
 
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JMSF050C09+           TTAATCAGGCGCCTAGGTGCCAATGTATTATTTTTGTGAGTGGGGGTATTTGGAGAAGTC
                      ____________________________________________________________
consensus             TTAATCAGGCGCCTAGGTGCCAATGTATTATTTTTGTGAGTGGGGGTATTTGGAGAAGTC