Contig 002463:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF049M21Sequence556002463 (2)ref|XP_006430727.1|6e-10hypothetical protein CICLE_v10013181mg [Citrus clementina] gb|ESR43967.1| hypoth494002463 (2)ref|XP_006430727.1|4e-10hypothetical protein CICLE_v10013181mg [Citrus clementina] gb|ESR43967.1| hypoth

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF049M21+ GGGATTCCACCACCAC
JMSF049M21- GGGATTCCACCACCAC
                      ____________________________________________________________
consensus GGGATTCCACCACCAC
 
. : . : . : . : . : . :
rJMSF049M21+ TGCACACACAAACACACAACTTAACAAAGAAGCTTGAAGATGCTGACGATGAGAAAGGGG
JMSF049M21- TGCACACACAAACACACAACTTAACAAAGAAGCTTGAAGATGCTGACGATGAGAAAGGGG
                      ____________________________________________________________
consensus TGCACACACAAACACACAACTTAACAAAGAAGCTTGAAGATGCTGACGATGAGAAAGGGG
 
. : . : . : . : . : . :
rJMSF049M21+ TCTACGACGACACTAATTGCCGTCTGCAATAATCATGACGGCCATGCTCATCGGCGAACT
JMSF049M21- TCTACGACGACACTAATTGCCGTCTGCAATAATCATGACGGCCATGCTCATCGGCGAACT
                      ____________________________________________________________
consensus TCTACGACGACACTAATTGCCGTCTGCAATAATCATGACGGCCATGCTCATCGGCGAACT
 
. : . : . : . : . : . :
rJMSF049M21+ GGAGCTGACTATGGCTCAGCCGCCGCCTCCACCACCGGGATGCAACGAGAGGGCTCTGAC
JMSF049M21- GGAGCTGACTATGGCTCAGCCGCCGCCTCCACCACCGGGATGCAACGAGAGGGCTCTGAC
                      ____________________________________________________________
consensus GGAGCTGACTATGGCTCAGCCGCCGCCTCCACCACCGGGATGCAACGAGAGGGCTCTGAC
 
. : . : . : . : . : . :
rJMSF049M21+ CCCATGCGGGCCGGCGATCCTGTTTGGGACGGCGCCGTCGACTGAATGTTGCCGTATCCT
JMSF049M21- CCCATGCGGGCCGGCGATCCTGTTTGGGACGGCGCCGTCGACTGAATGTTGCCGTATCCT
                      ____________________________________________________________
consensus CCCATGCGGGCCGGCGATCCTGTTTGGGACGGCGCCGTCGACTGAATGTTGCCGTATCCT
 
. : . : . : . : . : . :
rJMSF049M21+ GAGGCAGCAGACCCCCAAGTGCCTTTGCGAGTACCTTCGCAAGTATCCAGGGTATGCTGC
JMSF049M21- GAGGCAGCAGACCCCCAAGTGCCTTTGCGAGTACCTTCGCAAGTATCCAGGGTATGCTGC
                      ____________________________________________________________
consensus GAGGCAGCAGACCCCCAAGTGCCTTTGCGAGTACCTTCGCAAGTATCCAGGGTATGCTGC
 
. : . : . : . : . : . :
rJMSF049M21+ TAATGCTAGAAAAGCTTTTAGGGCTTGTGGTGTGCCTGAACCTCGCTGTTAAAATATATA
JMSF049M21- TAATGCTAGAAAAGCTTTTAGGGCTTGTGGTGTGCCTGAACCTCGCTGTTAAAATATATA
                      ____________________________________________________________
consensus TAATGCTAGAAAAGCTTTTAGGGCTTGTGGTGTGCCTGAACCTCGCTGTTAAAATATATA
 
. : . : . : . : . : . :
rJMSF049M21+ TGCCTCAGATCAGATCAGCTCTATCATATCCTATCCTATCCACCATTATATAATATAATA
JMSF049M21- TGCCTCAGATCAGATCAGCTCTATCATATCCTATCCTATCCACCATTATATAATATAATA
                      ____________________________________________________________
consensus TGCCTCAGATCAGATCAGCTCTATCATATCCTATCCTATCCACCATTATATAATATAATA
 
. : . : . : . : . : . :
rJMSF049M21+ ATATTCTACTTGAGTTACGTTATTAAATAAATAAAGGCATATAAAGCCTACCCATCTT
JMSF049M21- ATATTCTACTTGAGTTACGTTATTAAATAAATAAAGGCATATAAAGCCTACCCATCTTAA
                      ____________________________________________________________
consensus ATATTCTACTTGAGTTACGTTATTAAATAAATAAAGGCATATAAAGCCTACCCATCTTAA
 
. : . : . : . : . : . :
JMSF049M21- TTGCAGTCATGGCATCTATCTATAAGTATTACTTGGTGTTATTACTAGCTAAAAAAAAAA
                      ____________________________________________________________
consensus TTGCAGTCATGGCATCTATCTATAAGTATTACTTGGTGTTATTACTAGCTAAAAAAAAAA