clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF018N12 | Sequence | 558 | 002461 (5) | ref|XP_009610231.1| | 2e-36 | PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform | 793 | 011433 (4) | ref|XP_009610231.1| | 1e-106 | PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform |
JMFF027M11 | Sequence | 567 | 002461 (5) | ref|XP_009610231.1| | 5e-38 | PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform | 696 | 011433 (4) | ref|XP_009610231.1| | 5e-81 | PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform |
JMFF046B14 | Sequence | 463 | 002461 (5) | ref|XP_009610231.1| | 7e-29 | PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform | 331 | 011433 (4) | emb|CBI24594.3| | 8e-13 | unnamed protein product [Vitis vinifera] |
JMFS116B01 | Sequence | 579 | 002461 (5) | ref|XP_009610231.1| | 8e-45 | PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform | |||||
JMSF049I19 | Sequence | 699 | 002461 (5) | ref|XP_009610231.1| | 2e-67 | PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform | 732 | 011433 (4) | emb|CBI24594.3| | 6e-28 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF049I19+ AAAGGGCTGTGAACAAACCAGTTCCCACCATTCCCACCG
____________________________________________________________
consensus AAAGGGCTGTGAACAAACCAGTTCCCACCATTCCCACCG
. : . : . : . : . : . :
JMFS116B01+ GACG
JMSF049I19+ TCAAGAAAATCCTAAGATCCATTCTATCACCTATATGCCCCGAGAAATACATCCCCGACG
____________________________________________________________
consensus TCAAGAAAATCCTAAGATCCATTCTATCACCTATATGCCCCGAGAAATACATCCCCGACG
. : . : . : . : . : . :
JMFS116B01+ CATACACAAACAGGAAAGCCACATCAATATAGCCGAGCAATTCTGTGCCACTAGGACCAT
JMFF027M11+ AGCCGAGCAATTCTGTGCCACTAGGACCAT
JMFF018N12+ ATTCTGTGCCACTAGGACCAT
JMSF049I19+ CATACACAAACAGGAAAGCCACATCAATATAGCCGAGCAATTCTGTGCCACTAGGACCAT
____________________________________________________________
consensus CATACACAAACAGGAAAGCCACATCAATATAGCCGAGCAATTCTGTGCCACTAGGACCAT
. : . : . : . : . : . :
JMFS116B01+ CGAAAGGATACCAGCCACTCCCAAGCACCCATGATCCTCTCAAGTTCTGGCGAGAATTCT
JMFF027M11+ CGAAAGGATACCAGCCACTCCCAAGCACCCATGATCCTCTCAAGTTCTGGCGAGAATTCT
JMFF018N12+ CGAAAGGATACCAGCCACTCCCAAGCACCCATGATCCTCTCAAGTTCTGGCGAGAATTCT
JMSF049I19+ CGAAAGGATACCAGCCACTCCCAAGCACCCATGATCCTCTCAAGTTCTGGCGAGAATTCT
____________________________________________________________
consensus CGAAAGGATACCAGCCACTCCCAAGCACCCATGATCCTCTCAAGTTCTGGCGAGAATTCT
. : . : . : . : . : . :
JMFS116B01+ GAGCATAACCTCTCAGCCATGGGGAATTTAACTCAACTTCAATCGTCTGTGGATCAAGCG
JMFF027M11+ GAGCATAACCTCTCAGCCATGGGGAATTTAACACAACTTCAATCGTCTGTGGATCAAGCG
JMFF018N12+ GAGCATAACCTCTCAGCCATGGGGAATTTAACACAACTTCAATCGTCTGTGGATCAAGCG
JMFF046B14+ CAGCCATGGGGAATTTAACTCAACTTCAATCGTCTGTGGATCAAGCG
JMSF049I19+ GAGCATAACCTCTCAGCCATGGGGAATTTAACTCAACTTCAATCGTCTGTGGATCAAGCG
____________________________________________________________
consensus GAGCATAACCTCTCAGCCATGGGGAATTTAACTCAACTTCAATCGTCTGTGGATCAAGCG
. : . : . : . : . : . :
JMFS116B01+ CACTTTTCACAATGCTGGTCGTTTTCCTAGTAGCATGATATGCCGCGTATGCAAAAAATG
JMFF027M11+ CACTTTTCACAATGCTGGTCGTTTTCCTAGTAGCATGATATGCCGCGTATGCAAAAAATG
JMFF018N12+ CACTTTTCACAATGCTGGTCGTTTTCCTAGTAGCATGATATGCCGCGTATGCAAAAAATG
JMFF046B14+ CACTTTTCACAATGCTGGTCGTTTTCCTAGTAGCATGATATGCCGCGTATGCAAAAAATG
JMSF049I19+ CACTTTTCACAATGCTGGTCGTTTTCCTAGTAGCATGATATGCCGCGTATGCAAAAAATG
____________________________________________________________
consensus CACTTTTCACAATGCTGGTCGTTTTCCTAGTAGCATGATATGCCGCGTATGCAAAAAATG
. : . : . : . : . : . :
JMFS116B01+ TTACAATTAGAACTATGGCTTGATACGTCTTGTATGAGAAGGCCGTCTTCTTTGCGCCCT
JMFF027M11+ TTACAATTAGAACTATGGCTTGATACGTCTTGTATGAGAAGGCCGTCTTCTTTGCGCCCT
JMFF018N12+ TTACAATTAGAACTATGGCTTGATACGTCTTGTATGAGAAGGCCGTCTTCTTTGCGCCCT
JMFF046B14+ TTACAATTAGAACTATGGCTTGATACGTCTTGTATGAGAAGGCCGTCTTCTTTGCGCCCT
JMSF049I19+ TTACAATTAGAACTATGGCTTGATACGTCTTGTATGAGAAGGCCGTCTTCTTTGCGCCCT
____________________________________________________________
consensus TTACAATTAGAACTATGGCTTGATACGTCTTGTATGAGAAGGCCGTCTTCTTTGCGCCCT
. : . : . : . : . : . :
JMFS116B01+ CTAAGAACTTTATTCCTGGAGGCTTCTTGTAGTTTGTCTCCTCAATTGGCTCTGGAAGAG
JMFF027M11+ CTAAGAACTTTATTCCTGGAGGCTTCTTGTAGTTTGTCTCCTCAATTGGCTCTGGAAGAG
JMFF018N12+ CTAAGAACTTTATTCCTGGAGGCTTCTTGTAGTTTGTCTCCTCAATTGGCTCTGGAAGAG
JMFF046B14+ CTAAGAACTTTATTCCTGGAGGCTTCTTGTAGTTTGTCTCCTCAATTGGCTCTGGAAGAG
JMSF049I19+ CTAAGAACTTTATTCCTGGAGGCTTCTTGTAGTTTGTCTCCTCAATTGGCTCTGGAAGAG
____________________________________________________________
consensus CTAAGAACTTTATTCCTGGAGGCTTCTTGTAGTTTGTCTCCTCAATTGGCTCTGGAAGAG
. : . : . : . : . : . :
JMFS116B01+ ACCCCATTAATGGATATCAACTCAAATCTGATTACCAGGAAGAGCGCCCAAAAATCCCCT
JMFF027M11+ ACCCCATTAATGGATATCAACTCAAATCTGATTACCAGGAAGAGCGCCCAAAAATCCCCT
JMFF018N12+ ACCCCATTAATGGATATCAACTCAAATCTGATTACCAGGAAGAGCGCCCAAAAATCCCCT
JMFF046B14+ ACCCCATTAATGGATATCAACTCAAATCTGATTACCAGGAAGAGCGCCCAAAAATCCCCT
JMSF049I19+ ACCCCATTAATGGATATCAACTCAAATCTGATTACCAGGAAGAGCGCCCAAAAATCCCCT
____________________________________________________________
consensus ACCCCATTAATGGATATCAACTCAAATCTGATTACCAGGAAGAGCGCCCAAAAATCCCCT
. : . : . : . : . : . :
JMFS116B01+ CTTCTATGAGTCCAAGAATAATGATAAATCCTTACTGAGTTGAATGGATCGCTTTGCTTT
JMFF027M11+ CTTCTATGAGTCCAAGAATAATGATAAATCCTTACTGAGTTGAATGGATCGCTTTGCTTT
JMFF018N12+ CTTCTATGAGTCCAAGAATAATGATAAATCCTTACTGAGTTGAATGGATCGCTTTGCTTT
JMFF046B14+ CTTCTATGAGTCCAAGAATAATGATAAATCCTTACTGAGTTGAATGGATCGCTTTGCTTT
JMSF049I19+ CTTCTATGAGTCCAAGAATAATGATAAATCCTTACTGAGTTGAATGGATCGCTTTGCTTT
____________________________________________________________
consensus CTTCTATGAGTCCAAGAATAATGATAAATCCTTACTGAGTTGAATGGATCGCTTTGCTTT
. : . : . : . : . : . :
JMFS116B01+ GCTTTCCTTTCTCTGGCAGTCTGTACTGAGATTCTCTATTCAGATTCCCAGTGTATATTA
JMFF027M11+ GCTTTCCTTTCTCTGGCAGTCTGTACTGAGATTCTCTATTCAGATTCCCAGTGTATATTA
JMFF018N12+ GCTTTCCTTTCTCTGGCAGTCTGTACTGAGATTCTCTATTCAGATTCCCAGTGTATATTA
JMFF046B14+ GCTTTCCTTTCTCTGGCAGTCTGTACTGAGATTCTCTATTCAGATTCCCAGTGTATATTA
JMSF049I19+ GCTTTCCTTTCTCTGGCAGTCTGTACTGAGATTCTCTATTCAGATTCCCAGTGTATATTA
____________________________________________________________
consensus GCTTTCCTTTCTCTGGCAGTCTGTACTGAGATTCTCTATTCAGATTCCCAGTGTATATTA
. : . : . : . : . : . :
JMFS116B01+ TATGAGAGAACGGAGAAGACTATGACTCTAAAGCT
JMFF027M11+ TATGAGAGAACGGAGAAGACTATGACTCTAAAGCTGCTTCTTTTCTTCAGGAAGCC
JMFF018N12+ TATGAGAGAACGGAGAAGACTATGACTCTAAAGCTGCTTCTTTTCTTCAGGAAGCC
JMFF046B14+ TATGAGAGAACGGAGAAGACTATGACTCTAAAGCTGCTTCTTTTCTTCAGGAAGCC
JMSF049I19+ TATGAGAGAACGGAGAAGACTATGACTCTAAAGCTGCTTCTTTTCTTCAGGAAGCCGATC
____________________________________________________________
consensus TATGAGAGAACGGAGAAGACTATGACTCTAAAGCTGCTTCTTTTCTTCAGGAAGCCGATC