Contig 002460:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS009D12Sequence610002460 (8)ref|XP_009771911.1|2e-105PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Nicotiana sylvestris] r
JMSF015H03Sequence221002460 (8)759014041 (8)gb|EPS66777.1|9e-152hypothetical protein M569_07999 [Genlisea aurea]
JMSF020N14Sequence451002460 (8)ref|XP_009758663.1|1e-91PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X3 [Nicotiana sy806014041 (8)gb|EPS66777.1|1e-123hypothetical protein M569_07999 [Genlisea aurea]
JMSF022E20Sequence707002460 (8)ref|XP_009771911.1|5e-120PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Nicotiana sylvestris] r760014041 (8)gb|EPS66777.1|6e-120hypothetical protein M569_07999 [Genlisea aurea]
JMSF033A20Sequence707002460 (8)ref|XP_009771911.1|1e-120PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Nicotiana sylvestris] r658014041 (8)gb|EPS66777.1|5e-94hypothetical protein M569_07999 [Genlisea aurea]
JMSF036L14Sequence682002460 (8)ref|XP_009771911.1|8e-114PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Nicotiana sylvestris] r712014041 (8)gb|EPS66777.1|2e-106hypothetical protein M569_07999 [Genlisea aurea]
JMSF048B09Sequence709002460 (8)ref|XP_009771911.1|1e-120PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Nicotiana sylvestris] r811014041 (8)gb|EPS66777.1|3e-133hypothetical protein M569_07999 [Genlisea aurea]
JMSF049G03Sequence682002460 (8)ref|XP_009771911.1|8e-114PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Nicotiana sylvestris] r759001512 (2)ref|XP_009610701.1|2e-84PREDICTED: cellulose synthase-like protein G3 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF033A20+ CATTCATCAAGTATAAAATGCCTCACATTCATCAAGGAAAGATGCTTTT
JMSF022E20+ TTCATCAAGTATAAAATGCCTCACATTCATCAAGGAAAGATGCTTTT
JMSF036L14+ TTCATCAAGGAAAGATGCTTTT
JMSF048B09+ TTCATCAAGTATAAAATGCCTCACATTCATCAAGGAAAGATGCTTTT
JMSF049G03+ TTCATCAAGGAAAGATGCTTTT
                      ____________________________________________________________
consensus CATTCATCAAGTATAAAATGCCTCACATTCATCAAGGAAAGATGCTTTT
 
. : . : . : . : . : . :
JMSF033A20+ CCCTTGATAATGCAAGAATTCTTCCAGGAGTTCCAACAACAATGTGAGGGCATTCATTCT
JMSF020N14+ AATGTGAGGGCATTCATTCT
JMSF022E20+ CCCTTGATAATGCAAGAATTCTTCCAGGAGTTCCAACAACAATGTGAGGGCATTCATTCT
JMSF036L14+ CCCTTGATAATGCAAGAATTCTTCCAGGAGTTCCAACAACAATGTGAGGGCATTCATTCT
JMSF048B09+ CCCTTGATAATGCAAGAATTCTTCCAGGAGTTCCAACAACAATGTGAGGGCATTCATTCT
JMFS009D12+ GGAGTTCCAACAACAATGTGAGGGCATTCATTCT
JMSF049G03+ CCCTTGATAATGCAAGAATCCTTCCAGGAGTTCCAACAACAATGTGAGGGCATTCATTCT
                      ____________________________________________________________
consensus CCCTTGATAATGCAAGAATTCTTCCAGGAGTTCCAACAACAATGTGAGGGCATTCATTCT
 
. : . : . : . : . : . :
JMSF033A20+ TTAGAAGATCCTTGTGAATTGTTATGTTAACACCACCATAAAAAACAGCAACCTTGATAT
JMSF020N14+ TTAGAAGATCNTTGTGAATTGTTATGTTAACACCACCATAAAAAACAGCAACCTTGATAT
JMSF022E20+ TTAGAAGATCCTTGTGAATTGTTATGTTAACACCACCATAAAAAACAGCAACCTTGATAT
JMSF036L14+ TTAGAAGATCCTTGTGAATTGTTATGTTAACACCACCATAAAAAACAGCAACCTTGATAT
JMSF048B09+ TTAGAAGATCCTTGTGAATTGTTATGTTAACACCACCATAAAAAACAGCAACCTTGATAT
JMFS009D12+ TTAGAAGATCCTTGTGAATTGTTATGTTAACACCACCATAAAAAACAGCAACCTTGATAT
JMSF049G03+ TTAGAAGATCCTTGTGAATTGTTATGTTAACACCACCATAAAAAACAGCAACCTTGATAT
                      ____________________________________________________________
consensus TTAGAAGATCCTTGTGAATTGTTATGTTAACACCACCATAAAAAACAGCAACCTTGATAT
 
. : . : . : . : . : . :
JMSF033A20+ CAGGCAAATATGTGCTGAACCTCTCAAATTCATGACAGATCTGATAAGCTAATTCTCTGG
JMSF020N14+ CAGGCAAATATGTGCTGAACCTCTCAAATTCATGACAGGTCTGATAAGCTAATTCTNTGG
JMSF022E20+ CAGGCAAATATGTGCTGAACCTCTCAAATTCATGACAGGTCTGATAAGCTAATTCTCTGG
JMSF036L14+ CAGGCAAATATGTGCTGAACCTCTCAAATTCATGACAGATCTGATAAGCTAATTCTCTGG
JMSF048B09+ CAGGCAAATATGTGCTGAACCTCTCAAATTCATGACAGATCTGATAAGCTAATTCTCTGG
JMFS009D12+ CAGGCAAATATGTGCTGAACCTCTCAAATTCATGACAGATCTGATAAGCTAATTCTCTGG
JMSF049G03+ CAGGCAAATATGTGCTGAACCTCTCAAATTCATGACAGATCTGATAAGCTAATTCTCTGG
                      ____________________________________________________________
consensus CAGGCAAATATGTGCTGAACCTCTCAAATTCATGACAGATCTGATAAGCTAATTCTCTGG
 
. : . : . : . : . : . :
JMSF033A20+ TATGACATAGAACTAGGGCAGCAACTTGACCAGCAACGGGTTCAATCTGTTGCAAAGTTG
JMSF020N14+ TATGACATAGAACTAGGGCAGCAACTTGACCAGCAACGGGTTCAATCTGTTGCAAAGTTG
JMSF022E20+ TATGACATAGAACTAGGGCAGCAACTTGACCAGCAACGGGTTCAATCTGTTGCAAAGTTG
JMSF036L14+ TATGACATAGAACTAGGGCAGCAACTTGACCAGCAACGGGTTCAATCTGTTGCAAAGTTG
JMSF048B09+ TATGACATAGAACTAGGGCAGCAACTTGACCAGCAACGGGTTCAATCTGTTGCAAAGTTG
JMFS009D12+ TATGACATAGAACTAGGGCAGCAACTTGACCAGCAACGGGTTCAATCTGTTGCAAAGTTG
JMSF049G03+ TATGACATAGAACTAGGGCAGCAACTTGACCAGCAACGGGTTCAATCTGTTGCAAAGTTG
                      ____________________________________________________________
consensus TATGACATAGAACTAGGGCAGCAACTTGACCAGCAACGGGTTCAATCTGTTGCAAAGTTG
 
. : . : . : . : . : . :
JMSF033A20+ ATAGAACAAATACTGCAGTTTTCCCCATTCCAGATTTGGCTTGGCAAATTACATCCATAC
JMSF020N14+ ATAGAACAAATACTGCAGTTTTCCCCATTCCAGATTTGGCTNGGCAAATTACATCCATAC
JMSF022E20+ ATAGAACAAATACTGCAGTTTTCCCCATTCCAGATTTGGCTTGGCAAATTACATCCATAC
JMSF036L14+ ATAGAACAAATACTGCAGTTTTCCCCATTCCAGATTTGGCTTGGCAAATTACATCCATAC
JMSF048B09+ ATAGAACAAATACTGCAGTTTTCCCCATTCCAGATTTGGCTTGGCAAATTACATCCATAC
JMFS009D12+ ATAGAACAAATACTGCAGTTTTCCCCATTCCAGATTTGGCTTGGCAAATTACATCCATAC
JMSF049G03+ ATAGAACAAATACTGCAGTTTTCCCCATTCCAGATTTGGCTTGGCAAATTACATCCATAC
                      ____________________________________________________________
consensus ATAGAACAAATACTGCAGTTTTCCCCATTCCAGATTTGGCTTGGCAAATTACATCCATAC
 
. : . : . : . : . : . :
JMSF033A20+ CCAAAATAGCTTGGGGAATGCATTCATGTTGCACTTCAGATGGATGCTCAAACCCTGAAT
JMSF020N14+ CCAAAATAGCTTGGGGAANGCATTCATGNTGCACTTCAGATGGATGCTCAAACCNTGAAT
JMSF022E20+ CCAAAATAGCTTGGGGAATGCATTCATGTTGCACTTCAGATGGATGCTCAAACCCTGAAT
JMSF036L14+ CCAAAATAGCTTGGGGAATGCATTCATGTTGCACTTCAGATGGATGCTCAAACCCTGAAT
JMSF048B09+ CCAAAATAGCTTGGGGAATGCATTCATGTTGCACTTCAGATGGATGCTCAAACCCTGAAT
JMFS009D12+ CCAAAATAGCTTGGGGAATGCATTCATGTTGCACTTCAGATGGATGCTCAAACCCTGAAT
JMSF049G03+ CCAAAATAGCTTGGGGAATGCATTCATGTTGCACTTCAGATGGATGCTCAAACCCTGAAT
                      ____________________________________________________________
consensus CCAAAATAGCTTGGGGAATGCATTCATGTTGCACTTCAGATGGATGCTCAAACCCTGAAT
 
. : . : . : . : . : . :
JMSF033A20+ CCACAATGGCTCGCAGTAGCTCTGGCTTTAGTAGAAAATCTCTGAAACCGGAGCTGTGAA
JMSF020N14+ CCACAATGGCTCGCAGTAGCTCTGGCTTTAGTAGAAAATCTCTGAAACCGGAGCTGTGAA
JMSF022E20+ CCACAATGGCTCGCAGTAGCTCTGGCTTTAGTAGAAAATCTCTGAAACCGGAGCTGTGAA
JMSF036L14+ CCACAATGGCTCGCAGTAGCTCTGGCTTTAGTAGAAAATCTCTGAAACCGGAGCTGTGAA
JMSF048B09+ CCACAATGGCTCGCAGTAGCTCTGGCTTTAGTAGAAAATCTCTGAAACCGGAGCTGTGAA
JMFS009D12+ CCACAATGGCTCGCAGTAGCTCTGGCTTTAGTAGAAAATCTCTGAAACCGGAGCTGTGAA
JMSF049G03+ CCACAATGGCTCGCAGTAGCTCTGGCTTTAGTAGAAAATCTCTGAAACCGGAGCTGTGAA
                      ____________________________________________________________
consensus CCACAATGGCTCGCAGTAGCTCTGGCTTTAGTAGAAAATCTCTGAAACCGGAGCTGTGAA
 
. : . : . : . : . : . :
JMSF033A20+ TTCCAATATATCCCTTCTTGGCGGACTCGCCGTTGACTTTAGCGGCTACGGAATCGGGGG
JMSF020N14+ TTCCAATATATCCCTTCTCGGCGGACTCGCCGTTGACTTTAGCGGCTACGGAATCGGGGG
JMSF022E20+ TTCCAATATATCCCTTCTTGGCGGACTCGCCGTTGACTTTAGCGGCTACGGAATCGGGGG
JMSF036L14+ TTCCAATATATCCCTTCTTGGCGGACTCGCCGTTGACTTTAGCGGCTACGGAATCGGGGG
JMSF048B09+ TTCCAATATATCCCTTCTTGGCGGACTCGCCGTTGACTTTAGCGGCTACGGAATCGGGGG
JMFS009D12+ TTCCAATATATCCCTTCTTGGCGGACTCGCCGTTGACTTTAGCGGCTACGGAATCGGGGG
JMSF015H03+ GGCGGACTCGCCGTTGACTTTAGCGGCTACGGAATCGGGGG
JMSF049G03+ TTCCAATATATCCCTTCTTGGCGGACTCGCCGTTGACTTTAGCGGCTACGGAATCGGGGG
                      ____________________________________________________________
consensus TTCCAATATATCCCTTCTTGGCGGACTCGCCGTTGACTTTAGCGGCTACGGAATCGGGGG
 
. : . : . : . : . : . :
JMSF033A20+ CTTTTTCGTCTTCTTCCTCGTAGTCGAGAAGCTCCTCCTCGTAAGCGTCGTTCTCCTTGT
JMSF020N14+ CTTTTTCGTCT
JMSF022E20+ CTTTTTCGTCTTCTTCCTCGTAGTCGAGAAGCTCCTCCTCGTAAGCGTCGTTCTCCTTGT
JMSF036L14+ CTTTTTCGTCTTCTTCCTCGTAGTCGAGAAGCTCCTCCTCGTAAGCGTCGTTCTCCTTGT
JMSF048B09+ CTTTTTCGTCTTCTTCCTCGTAGTCGAGAAGCTCCTCCTCGTAAGCGTCGTTCTCCTTGT
JMFS009D12+ CTTTTTCGTCTTCTTCCTCGTAGTCGAGAAGCTCCTCCTCGTAAGCGTCGTTCTCCTTGT
JMSF015H03+ CTTTTTCGTCTTCTTCCTCGTAGTCGAGAAGCTCCTCCTCGTAAGCGTCGTTCTCCTTGT
JMSF049G03+ CTTTTTCGTCTTCTTCCTCGTAGTCGAGAAGCTCCTCCTCGTAAGCGTCGTTCTCCTTGT
                      ____________________________________________________________
consensus CTTTTTCGTCTTCTTCCTCGTAGTCGAGAAGCTCCTCCTCGTAAGCGTCGTTCTCCTTGT
 
. : . : . : . : . : . :
JMSF033A20+ TTTCTCCCATTTGCTGCTTATTCTAGTCAAATCTGACGATGAACACGAGCTATGCTTTCT
JMSF022E20+ TTTCTCCCATTTGCTGCTTATTCTAGTCAAATCTGACGATGAACACGAGCTATGCTTTCT
JMSF036L14+ TTTCTCCCATTTGCTGCTTATTCTAGTCAAATCTGACGATGAACACGAGCTATGCTTTCT
JMSF048B09+ TTTCTCCCATTTGCTGCTTATTCTAGTCAAATCTGACGATGAACACGAGCTATGCTTTCT
JMFS009D12+ TTTCTCCCATTTGCTGCTTATTCTAGTCAAATCTGACGATGAACACGAGCTATGCTTTCT
JMSF015H03+ TTTCTCCCATTTGCTGCTTATTCTAGTCAAATCTGACGATGAACACGAGCTATGCTTTCT
JMSF049G03+ TTTCTCCCATTTGCTGCTTATTCTAGTCAAATCTGACGATGAACACGAGCTATGCTTTCT
                      ____________________________________________________________
consensus TTTCTCCCATTTGCTGCTTATTCTAGTCAAATCTGACGATGAACACGAGCTATGCTTTCT
 
. : . : . : . : . : . :
JMSF033A20+ GAAAAGAACTGGGGTTAGGGTTTGGATTCTGCAGAGAAAAATGTTAGGAAAAT
JMSF022E20+ GAAAAGAACTGGGGTTAGGGTTTGGATTCTGCAGAGAAAAATGTTAGGAAAATTCGGA
JMSF036L14+ GAAAAGAACTGGGGTTAGGGTTTGGATTCTGCAGAGAAAAATGTTAGGAAAATTCGGATC
JMSF048B09+ GAAAAGAACTGGGGTTAGGGTTTGGATTCTGCAGAGAAAAATGTTAGGAAAATTCGGATC
JMFS009D12+ GAAAAGAACTGGGGTTAGGGTTTGGATTCTGCAGAG
JMSF015H03+ GAAAAGAACTGGGGTTAGGGTTTGGATTCTGCAGAGAAAAATGTTAGGAAAATTCGGATC
JMSF049G03+ GAAAAGAACTGGGGTTAGGGTTTGGATTCTGCAGAGAAAAATGTTAGGAAAATTCGGATC
                      ____________________________________________________________
consensus GAAAAGAACTGGGGTTAGGGTTTGGATTCTGCAGAGAAAAATGTTAGGAAAATTCGGATC