Contig 002459:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046K01+                                                                GAACCTA
                      ____________________________________________________________
consensus                                                                  GAACCTA
 
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JMSF046K01+           AGCTGTTTTAGATCATAATCAAATTTCTTTTCCTTGACGGGCAAAAAGCATCTTTCCAAC
                      ____________________________________________________________
consensus             AGCTGTTTTAGATCATAATCAAATTTCTTTTCCTTGACGGGCAAAAAGCATCTTTCCAAC
 
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JMSF046K01+           CCGGCCTGCACCATCCTTGAGTATCCAGTTGATAGCTACAGCACTCTGGGTAGCTCTGTT
JMSF049E20+                                                                  CTGTT
                      ____________________________________________________________
consensus             CCGGCCTGCACCATCCTTGAGTATCCAGTTGATAGCTACAGCACTCTGGGTAGCTCTGTT
 
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JMSF046K01+           TTGGGATACTCCAACTGAACCTAAGAGTGTTTGTGTTGTAAAAACACTCATTGCTCCTCC
JMSF049E20+           TTGGGATACTCCAACTGAACCTAAGAGTGTTTGTGTTGTAAAAACACTCATTGCTCCTCC
                      ____________________________________________________________
consensus             TTGGGATACTCCAACTGAACCTAAGAGTGTTTGTGTTGTAAAAACACTCATTGCTCCTCC
 
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JMSF046K01+           ACAAAAGTACTTTAGAGCCCTCCAACTCATGTATGGCACATAAGAAGGCATAACACAATC
JMSF049E20+           ACAAAAGTACTTTAGAGCCCTCCAACTCATGTATGGCACATAAGAAGGCATAACACAATC
                      ____________________________________________________________
consensus             ACAAAAGTACTTTAGAGCCCTCCAACTCATGTATGGCACATAAGAAGGCATAACACAATC
 
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JMSF046K01+           CGGGAACCCTTCCGGAACCACATAAGATCTCACGAACGTCATCAAATCATCAATGGGAGT
JMSF049E20+           CGGGAACCCTTCCGGAACCACATAAGATCTCACGAACGTCATCAAATCATCAATGGGAGT
                      ____________________________________________________________
consensus             CGGGAACCCTTCCGGAACCACATAAGATCTCACGAACGTCATCAAATCATCAATGGGAGT
 
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JMSF046K01+           TTGAGGACTCTGCAATCCAACAGCACGAATCGAGCTCTTCTTCTTCGGTTGCATCGCCCC
JMSF049E20+           TTGAGGACTCTGCAATCCAACAGCACGAATCGAGCTCTTCTTCTTCGGTTGCATCGCCCC
                      ____________________________________________________________
consensus             TTGAGGACTCTGCAATCCAACAGCACGAATCGAGCTCTTCTTCTTCGGTTGCATCGCCCC
 
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JMSF046K01+           GCAACTCACACTGCCATCCGGGAAGTATTTCCACATGCGGCCGTCGATCTCCTCGCAGCA
JMSF049E20+           GCAACTCACACTGCCATCCGGGAAGTATTTCCACATGCGGCCGTCGATCTCCTCGCAGCA
                      ____________________________________________________________
consensus             GCAACTCACACTGCCATCCGGGAAGTATTTCCACATGCGGCCGTCGATCTCCTCGCAGCA
 
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JMSF046K01+           GAGCAATCTGGAGCTGGCATCAACCAGCGGCAGCTCCGTTGGGGCGGAGGAAGGCGGCGC
JMSF049E20+           GAGCAATCTGGAGCTGGCATCAACCAGCGGCAGCTCCGTTGGGGCGGAGGAAGGCGGCGC
                      ____________________________________________________________
consensus             GAGCAATCTGGAGCTGGCATCAACCAGCGGCAGCTCCGTTGGGGCGGAGGAAGGCGGCGC
 
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JMSF046K01+           GGAGGCGAGATTGGCGCTAATCCGGAGCGTCTCGCGGACGAGGAGGCGGGCGTCATGAGA
JMSF049E20+           GGAGGCGAGATTGGCGCTAATCCGGAGCGTCTCGCGGACGAGGAGGCGGGCGTCATGAGA
                      ____________________________________________________________
consensus             GGAGGCGAGATTGGCGCTAATCCGGAGCGTCTCGCGGACGAGGAGGCGGGCGTCATGAGA
 
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JMSF046K01+           GGAGGTGGTGGCCGTTAGGGTTTGAGAGGCGGAGTTGGAAGGAGACTTGAGCTTCATGGC
JMSF049E20+           GGAGGTGGTGGCCGTTAGGGTTTGAGAGGCGGAGTTGGAAGGAGACTTGAGCTTCATGGC
                      ____________________________________________________________
consensus             GGAGGTGGTGGCCGTTAGGGTTTGAGAGGCGGAGTTGGAAGGAGACTTGAGCTTCATGGC
 
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JMSF046K01+           GTATTGCGGGAGAAAAGAAATGGCGAAATTGGAAAATGCGAGGTCCTTTTATGGAGACGA
JMSF049E20+           GTATTGCGGGAGAAAAGAAATGGCGAAATTGGAAAATGCGAGGTCCTTTTATGGAGACGA
                      ____________________________________________________________
consensus             GTATTGCGGGAGAAAAGAAATGGCGAAATTGGAAAATGCGAGGTCCTTTTATGGAGACGA
 
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JMSF046K01+           AAGGGAGCTTTGGAAGTGACGACGGAGAGGTATATTAC                      
JMSF049E20+           AAGGGAGCTTTGGAAGTGACGACGGAGAGGTATATTACAGGAGGACAGGTAGAGGTGGCC
                      ____________________________________________________________
consensus             AAGGGAGCTTTGGAAGTGACGACGGAGAGGTATATTACAGGAGGACAGGTAGAGGTGGCC
 
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JMSF049E20+           TAACTATTTTTTGCAACGGAGCTTAAGAGAGAGTTGCAAGAGACGACAGAAGAGCGCGTC
                      ____________________________________________________________
consensus             TAACTATTTTTTGCAACGGAGCTTAAGAGAGAGTTGCAAGAGACGACAGAAGAGCGCGTC