Contig 002456:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF049A03+                                               GAAGATTAGATTCTTGAAATGGC
JMSF049A03-                                                GAAGATTAGATTCTTGAAATGGC
                      ____________________________________________________________
consensus                                                  GAAGATTAGATTCTTGAAATGGC
 
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rJMSF049A03+          TTCTTTAAACCCTAAATCTCCAGCCACCATTTTCCTTGCCCTCAACCTTCTTTTCTTTGC
JMSF049A03-           TTCTTTAAACCCTAAATCTCCAGCCACCATTTTCCTTGCCCTCAACCTTCTTTTCTTTGC
                      ____________________________________________________________
consensus             TTCTTTAAACCCTAAATCTCCAGCCACCATTTTCCTTGCCCTCAACCTTCTTTTCTTTGC
 
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rJMSF049A03+          TCTGATCACTGAAACCCAGCAAGCTTGTAACACTTGTCCTGGGAACCCCAAAACCCCACC
JMSF049A03-           TCTGATCACTGAAACCCAGCAAGCTTGTAACACTTGTCCTGGGAACCCCAAAACCCCACC
                      ____________________________________________________________
consensus             TCTGATCACTGAAACCCAGCAAGCTTGTAACACTTGTCCTGGGAACCCCAAAACCCCACC
 
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rJMSF049A03+          TCCTAGCCCCGGCGGTGGCAACGGTGGTGGAAATGGAGGCGGTGGCAATGGAGGCGGTGG
JMSF049A03-           TCCTAGCCCCGGCGGTGGCAACGGTGGTGGAAATGGAGGCGGTGGCAATGGAGGCGGTGG
                      ____________________________________________________________
consensus             TCCTAGCCCCGGCGGTGGCAACGGTGGTGGAAATGGAGGCGGTGGCAATGGAGGCGGTGG
 
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rJMSF049A03+          GAACGGTGGAGGGAGTGGCGGAGGAGGCGGACGGTGCCCAAGGGATGCGCTGAAGTTGGG
JMSF049A03-           GAACGGTGGAGGGAGTGGCGGAGGAGGCGGACGGTGCCCAAGGGATGCGCTGAAGTTGGG
                      ____________________________________________________________
consensus             GAACGGTGGAGGGAGTGGCGGAGGAGGCGGACGGTGCCCAAGGGATGCGCTGAAGTTGGG
 
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rJMSF049A03+          TGTGTGTGCAAATCTACTAGGAGGATTGGTGGGAGTGGTGGTCGGAAGTCCACCAACGCT
JMSF049A03-           TGTGTGTGCAAATCTACTAGGAGGATTGGTGGGAGTGGTGGTCGGAAGTCCACCAACGCT
                      ____________________________________________________________
consensus             TGTGTGTGCAAATCTACTAGGAGGATTGGTGGGAGTGGTGGTCGGAAGTCCACCAACGCT
 
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rJMSF049A03+          GCCGTGCTGCAGCTTGCTGGCCGGGCTGGCGGATCTGGAGGCGGCGGTGTGTCTGTGCAC
JMSF049A03-           GCCGTGCTGCAGCTTGCTGGCCGGGCTGGCGGATCTGGAGGCGGCGGTGTGTCTGTGCAC
                      ____________________________________________________________
consensus             GCCGTGCTGCAGCTTGCTGGCCGGGCTGGCGGATCTGGAGGCGGCGGTGTGTCTGTGCAC
 
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rJMSF049A03+          GGCGATACGAGCCAATGTTTTAGGAACAAACCTTAACGTGCCGGTTGCCCTCAGCCTGGT
JMSF049A03-           GGCGATACGAGCCAATGTTTTAGGAACAAACCTTAACGTGCCGGTTGCCCTCAGCCTGGT
                      ____________________________________________________________
consensus             GGCGATACGAGCCAATGTTTTAGGAACAAACCTTAACGTGCCGGTTGCCCTCAGCCTGGT
 
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rJMSF049A03+          CCTCAACAACTGTGGCCGCAAGGTTCCAAATGGCTTCACCTGTTAAACCACCTCCTACGT
JMSF049A03-           CCTCAACAACTGTGGCCGCAAGGTTCCAAATGGCTTCACCTGTTAAACCACCTCCTACGT
                      ____________________________________________________________
consensus             CCTCAACAACTGTGGCCGCAAGGTTCCAAATGGCTTCACCTGTTAAACCACCTCCTACGT
 
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rJMSF049A03+          ACGTACGTATGCTCTGCATGCATGCATGATACCCAGGGAGGGGGCATCAAATTAAAATAA
JMSF049A03-           ACGTACGTATGCTCTGCATGCATGCATGATACCCAGGGAGGGGGCATCAAATTAAAATAA
                      ____________________________________________________________
consensus             ACGTACGTATGCTCTGCATGCATGCATGATACCCAGGGAGGGGGCATCAAATTAAAATAA
 
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rJMSF049A03+          TATTCACACTTAAGTTCATTTGTTGTCGTATGTATGTGTTGTACTGTGTCACGTCGTTTG
JMSF049A03-           TATTCACACTTAAGTTCATTTGTTGTCGTATGTATGTGTTGTACTGTGTCACGTCGTTTG
                      ____________________________________________________________
consensus             TATTCACACTTAAGTTCATTTGTTGTCGTATGTATGTGTTGTACTGTGTCACGTCGTTTG
 
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rJMSF049A03+          ATGTT                                                       
JMSF049A03-           ATGTTTGTAACGTGCATGAATAAGATGGAANGTGTCAGTCTGTTTTTCCCAAAAAAAAAA
                      ____________________________________________________________
consensus             ATGTTTGTAACGTGCATGAATAAGATGGAANGTGTCAGTCTGTTTTTCCCAAAAAAAAAA