Contig 002447:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS073C10Sequence627002447 (3)emb|CDP16029.1|1e-57unnamed protein product [Coffea canephora]
JMFS104E02Sequence568002447 (3)ref|XP_006357875.1|8e-53PREDICTED: myosin-2 heavy chain-like [Solanum tuberosum]
JMSF047P15Sequence637002447 (3)ref|XP_002322552.2|1e-32hypothetical protein POPTR_0016s02020g [Populus trichocarpa] gb|EEF04313.2| hypo

Alignment

This contig is upended


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JMFS104E02+               ACTTGCTCCTTTGTGTTAACTTCCTCCTCCAGCTTCAACTTGAGTGCCTCCTCAGC
JMFS073C10+                                                 TCAACTTGAGTGCCTCCTCAGC
                      ____________________________________________________________
consensus                 ACTTGCTCCTTTGTGTTAACTTCCTCCTCCAGCTTCAACTTGAGTGCCTCCTCAGC
 
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JMFS104E02+           CCTCTCCCCTTCAGCAGTCTTCTCAGAAAGGACTTTAAGCTCTGCCTGCAAAGAAGCCAT
JMFS073C10+           CCTCTCCCCTTCAGCAGTCTTCTCAGAAAGGACTTTAAGCTCTGCCTGCAAAGAAGCCAT
                      ____________________________________________________________
consensus             CCTCTCCCCTTCAGCAGTCTTCTCAGAAAGGACTTTAAGCTCTGCCTGCAAAGAAGCCAT
 
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JMFS104E02+           CTGGTCTTCCATTTCTTTTGCACTTAATTTTGACTGCTCAAGCAACCTCTCGAATTCCGA
JMFS073C10+           CTGGTCTTCCATTTCTTTTGCACTTAATTTTGACTGCTCAAGCAACCTCTCGAATTCCGA
                      ____________________________________________________________
consensus             CTGGTCTTCCATTTCTTTTGCACTTAATTTTGACTGCTCAAGCAACCTCTCGAATTCCGA
 
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JMFS104E02+           GGCCCTCTTTGTCTCTGACTCTGCAAGTGAACCACTTTGCAAGTGCAATTCCTCAAACTT
JMFS073C10+           GGCCCTCTTTGTCTCTGACTCTGCAAGTGAACCACTTTGCAAGTGCAATTCCTCAAACTT
                      ____________________________________________________________
consensus             GGCCCTCTTTGTCTCTGACTCTGCAAGTGAACCACTTTGCAAGTGCAATTCCTCAAACTT
 
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JMFS104E02+           TCGGGACTCACCAACTGAAGTTTGCAGCTCCTGCTCAAGCTCTTCTCTCTTCTTTTTTGA
JMFS073C10+           TCGGGACTCACCAACTGAAGTTTGCAGCTCCTGCTCAAGCTCTTCTCTCTTCTTTTTTGA
                      ____________________________________________________________
consensus             TCGGGACTCACCAACTGAAGTTTGCAGCTCCTGCTCAAGCTCTTCTCTCTTCTTTTTTGA
 
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JMFS104E02+           GCTGTCAAACTCGAGGCTAAGTCTTTCAAATGCTTCCTTGACACTTTCAAGTTCCTTGTG
JMFS073C10+           GCTGTCAAACTCGAGGCTAAGTCTTTCAAATGCTTCCTTGACACTTTCAAGTTCCTTGTG
JMSF047P15+                                  TTTCAAATGCTTCCTTGACACTTTCAAGTTCCTTGTG
                      ____________________________________________________________
consensus             GCTGTCAAACTCGAGGCTAAGTCTTTCAAATGCTTCCTTGACACTTTCAAGTTCCTTGTG
 
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JMFS104E02+           CTTTACTTCTCCAGCATGTATAGCATCCTGCAAGGCACTGAGCTGGGCACTATATCTCCC
JMFS073C10+           CTTTACTTCTCCAGCATGTATAGCATCCTGCAAGGCACTGAGCTGGGCACTATATCTCCC
JMSF047P15+           CTTTACTTCTCCAGCATGTATAGCATCCTGCAAGGCACTGAGCTGGGCACTATATCTCCC
                      ____________________________________________________________
consensus             CTTTACTTCTCCAGCATGTATAGCATCCTGCAAGGCACTGAGCTGGGCACTATATCTCCC
 
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JMFS104E02+           TTCTTCCTCTGCAATCTGTTGTTGCAACTTCTTATGACTAATTTCAAGATCTTCATACTT
JMFS073C10+           TTCTTCCTCTGCAATCTGTTGTTGCAACTTCTTATGACTAATTTCAAGATCTTCATACTT
JMSF047P15+           TTCTTCCTCTGCAATCTGTTGTTGCAACTTCTTATGACTAATTTCAAGATCTTCATACTT
                      ____________________________________________________________
consensus             TTCTTCCTCTGCAATCTGTTGTTGCAACTTCTTATGACTAATTTCAAGATCTTCATACTT
 
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JMFS104E02+           TTTTCCAATCTCCCCTAGCTTCTCTTTTGTGAGTGAGAGTTCATCATTCAACTGATCATT
JMFS073C10+           TTTTCCAATCTCCCCTAGCTTCTCTTTTGTGAGTGAGAGTTCATCATTCAACTGATCATT
JMSF047P15+           TTTTCCAATCTCCCCTAGCTTCTCTTTTGTGAGTGAGAGTTCATCATTCAACTGATCATT
                      ____________________________________________________________
consensus             TTTTCCAATCTCCCCTAGCTTCTCTTTTGTGAGTGAGAGTTCATCATTCAACTGATCATT
 
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JMFS104E02+           TCGAGATTCAGAATCCTTTAATGATCCCATGA                            
JMFS073C10+           TCGAGATTCAGAATCCTTTAATGATCCCATGACTCTTTCCATTTCCACCTCAAGCTCTCT
JMSF047P15+           TCGAGATTCAGAATCCTTTAATGATCCCATGACTCTTTCCATTTCCACCTCAAGCTCTCT
                      ____________________________________________________________
consensus             TCGAGATTCAGAATCCTTTAATGATCCCATGACTCTTTCCATTTCCACCTCAAGCTCTCT
 
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JMFS073C10+           AACCTTTTCTTGGGATTCCAGAAACTCCCTGCTTGCAGATGAAAGGCTCACGACATTTTG
JMSF047P15+           AACCTTTTCTTGGGATTCCAGAAACTCCCTGCTTGCAGATGAAAGGCTCACGACATTTTG
                      ____________________________________________________________
consensus             AACCTTTTCTTGGGATTCCAGAAACTCCCTGCTTGCAGATGAAAGGCTCACGACATTTTG
 
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JMFS073C10+           AGAAG                                                       
JMSF047P15+           AGAAGCTGTATTTTCGGTAGCAGTATGTGCGACATCCTTTGATTCAAGAGTTTCTTTCTC
                      ____________________________________________________________
consensus             AGAAGCTGTATTTTCGGTAGCAGTATGTGCGACATCCTTTGATTCAAGAGTTTCTTTCTC
 
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JMSF047P15+           TACTTTTATGAATTCACCGTCAAAACCAGTTTCTTCTTCTTCTTCTTTCTTTCCTACCTT
                      ____________________________________________________________
consensus             TACTTTTATGAATTCACCGTCAAAACCAGTTTCTTCTTCTTCTTCTTTCTTTCCTACCTT
 
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JMSF047P15+           CTCTGTCACCTTAATCGGGTCAGCTTTGCTGTCTTTGTCCTCTGCAACCTTTGAAATTGG
                      ____________________________________________________________
consensus             CTCTGTCACCTTAATCGGGTCAGCTTTGCTGTCTTTGTCCTCTGCAACCTTTGAAATTGG
 
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JMSF047P15+           TATATCAGGATCTAATTGAATCTCTGCTTCCATTACAAAATGAATGTTGCCTTCTGACTA
                      ____________________________________________________________
consensus             TATATCAGGATCTAATTGAATCTCTGCTTCCATTACAAAATGAATGTTGCCTTCTGACTA
 
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JMSF047P15+           ATGAACCTTTCCAGCAATCTGATCAAAGTAGCCGCAACAACGATGATATCGATCCGATTC
                      ____________________________________________________________
consensus             ATGAACCTTTCCAGCAATCTGATCAAAGTAGCCGCAACAACGATGATATCGATCCGATTC