Contig 002444:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF023N15+                     AAAAAAAAAAAAAAAAAATGCATCACTCTTGAAGTAAGAATATTACCCAG
JMSF047M02+                                                                 ACCCAG
                      ____________________________________________________________
consensus                       AAAAAAAAAAAAAAAAAATGCATCACTCTTGAAGTAAGAATATTACCCAG
 
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JMSF023N15+           CTAAGGCAACGTTGAGAAGAAAAGTCCGAGTGGTCATGAAGCGGAGAAGCATCTCCATTT
JMSF047M02+           CTAAGGCAACGTTGAGAAGAAAAGTCCGAGTGGTCATGAAGCGGAGAAGCATCTCCATTT
                      ____________________________________________________________
consensus             CTAAGGCAACGTTGAGAAGAAAAGTCCGAGTGGTCATGAAGCGGAGAAGCATCTCCATTT
 
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JMSF023N15+           TGGTAACCATGCCGTCCGAAGCATGGCGGCTGTAGGTATAACCATAATTACTGCCATTCC
JMSF047M02+           TGGTAACCATGCCGTCCGAAGCATGGCGGCTGTAGGTATAACCATAATTACTGCCATTCC
                      ____________________________________________________________
consensus             TGGTAACCATGCCGTCCGAAGCATGGCGGCTGTAGGTATAACCATAATTACTGCCATTCC
 
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JMSF023N15+           CGCGGGAATTTCCATAACTACTACTCTGATATTGATAATAACTGCCAGAACTGCGACTAT
JMSF047M02+           CGCGGGAATTTCCATAACTACTACTCTGATATTGATAATAACTGCCAGAACTGCGACTAT
                      ____________________________________________________________
consensus             CGCGGGAATTTCCATAACTACTACTCTGATATTGATAATAACTGCCAGAACTGCGACTAT
 
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JMSF023N15+           AATTATTATTTCCGTAGGAAGAAGAGGTAGAGGAGCGGATGTTGTAATCGGCGCGCTTGC
JMSF047M02+           AATTATTATTTCCGTAGGAAGAAGAGGTAGAGGAGCGGATGTTGTAATCGGCGCGCTTGC
                      ____________________________________________________________
consensus             AATTATTATTTCCGTAGGAAGAAGAGGTAGAGGAGCGGATGTTGTAATCGGCGCGCTTGC
 
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JMSF023N15+           GGTCGTCCATTAGGGTGTCGTAGGCGTCGGAGAGCTGCTTGAAATTGGAGGTGGCGCGTT
JMSF047M02+           GGTCGTCCATTAGGGTGTCGTAGGCGTCGGAGAGCTGCTTGAAATTGGAGGTGGCGCGTT
                      ____________________________________________________________
consensus             GGTCGTCCATTAGGGTGTCGTAGGCGTCGGAGAGCTGCTTGAAATTGGAGGTGGCGCGTT
 
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JMSF023N15+           CTCTCACGTGCGGCGGGGGGTTGACGTGCTTGTCCGGGTGGAATTCCACCGCCAATTTCC
JMSF013H24+                                                                   TTCC
JMSF047M02+           CTCTCACGTGCGGCGGGGAGTTGACGTGCTTGTCCGGGTGGAATTCCACCGCCAATTTCC
                      ____________________________________________________________
consensus             CTCTCACGTGCGGCGGGGGGTTGACGTGCTTGTCCGGGTGGAATTCCACCGCCAATTTCC
 
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JMSF023N15+           GGAACGCTTGCTTGATCGCTTCCTTGCTCGCCTGACGGCTCACCCCTAATACCTTGTAAT
JMSF013H24+           GGAACGCTTGCTTGATCGCTTCCTTGCTCGCCTGACGGCTCACCCCTAATACCTTGTAAT
JMSF047M02+           GGAACGCTTGCTTGATCGCTTCCTTGCTCGCCTGACGGCTCACCCCTAATACCTTGTAAT
                      ____________________________________________________________
consensus             GGAACGCTTGCTTGATCGCTTCCTTGCTCGCCTGACGGCTCACCCCTAATACCTTGTAAT
 
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JMSF023N15+           GATCCATCGCTTTGTCGTACTATGC                                   
JMSF013H24+           GATCCATCGCTTTGTCGTACTATGCGTCCTGTCCTGTCCTCTTCTTGTGTTTCTCTCTCG
JMSF047M02+           GATCCATCGCTTTGTCGTACTATGCGTCCTGTCCTGTCCTCTTCTTGTGTTTCTCTCTCG
                      ____________________________________________________________
consensus             GATCCATCGCTTTGTCGTACTATGCGTCCTGTCCTGTCCTCTTCTTGTGTTTCTCTCTCG
 
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JMSF013H24+           TTTCCGTCGGTGGAGAGAGTAACAGAGCGGAGCGTTGTTGTTAGCTTCTGATCTGTGTGG
JMSF047M02+           TTTCCGTCGGTGGAGAGAGTAACAGAGCGGAGCGTTGTTGTTAGCTTNTGATCTGTGTGG
                      ____________________________________________________________
consensus             TTTCCGTCGGTGGAGAGAGTAACAGAGCGGAGCGTTGTTGTTAGCTTCTGATCTGTGTGG
 
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JMSF013H24+           ACAATAAAGCGGACGCCGGCGGAGACACGGTGGTTCCGAATTTTGCGGCACCCGTGGCGC
JMSF047M02+           ACAATAAAGCGGACGCCGGCGGAGACACGGTGGTTCCGAATTTTGCGGCACCCGTGGCGC
                      ____________________________________________________________
consensus             ACAATAAAGCGGACGCCGGCGGAGACACGGTGGTTCCGAATTTTGCGGCACCCGTGGCGC
 
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JMSF013H24+           TACCACAGCCGC                                                
JMSF047M02+           TACCACAGCCGCGCGCCTTCAATACCCCAAATTTTGCTAATAAATCGTCAATTAAAATTC
                      ____________________________________________________________
consensus             TACCACAGCCGCGCGCCTTCAATACCCCAAATTTTGCTAATAAATCGTCAATTAAAATTC