Contig 002443:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032B21Sequence558002443 (14)ref|XP_007143205.1|2e-58hypothetical protein PHAVU_007G052700g [Phaseolus vulgaris] gb|ESW15199.1| hypot566002443 (14)ref|XP_007143205.1|2e-58hypothetical protein PHAVU_007G052700g [Phaseolus vulgaris] gb|ESW15199.1| hypot
JMFF033A06Sequence571002443 (14)ref|XP_009420221.1|3e-58PREDICTED: cysteine-rich PDZ-binding protein-like isoform X1 [Musa acuminata su561002443 (14)ref|XP_009420221.1|3e-58PREDICTED: cysteine-rich PDZ-binding protein-like isoform X1 [Musa acuminata su
JMFF046E16Sequence583002443 (14)ref|XP_007143205.1|3e-58hypothetical protein PHAVU_007G052700g [Phaseolus vulgaris] gb|ESW15199.1| hypot443002443 (14)ref|XP_007143205.1|2e-50hypothetical protein PHAVU_007G052700g [Phaseolus vulgaris] gb|ESW15199.1| hypot
JMFN019K13Sequence624002443 (14)ref|XP_007143205.1|5e-58hypothetical protein PHAVU_007G052700g [Phaseolus vulgaris] gb|ESW15199.1| hypot
JMFN034C23Sequence584002443 (14)ref|XP_007143205.1|4e-58hypothetical protein PHAVU_007G052700g [Phaseolus vulgaris] gb|ESW15199.1| hypot
JMSF001H15Sequence388013399 (29)ref|XP_006409426.1|1e-23hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo539002443 (14)ref|XP_007143205.1|2e-58hypothetical protein PHAVU_007G052700g [Phaseolus vulgaris] gb|ESW15199.1| hypot
JMSF005G22Sequence277000283 (11)ref|XP_009587619.1|1e-22PREDICTED: fasciclin-like arabinogalactan protein 17 [Nicotiana tomentosiformis110002443 (14)
JMSF005I24Sequence307002443 (14)ref|NP_001150297.1|2e-40cysteine-rich PDZ-binding protein [Zea mays] ref|NP_001149577.1| LOC100283203 [Z394002443 (14)ref|XP_007143205.1|1e-51hypothetical protein PHAVU_007G052700g [Phaseolus vulgaris] gb|ESW15199.1| hypot
JMSF047I24Sequence606002443 (14)ref|XP_009420221.1|7e-56PREDICTED: cysteine-rich PDZ-binding protein-like isoform X1 [Musa acuminata su373002443 (14)ref|XP_010052818.1|4e-26PREDICTED: cysteine-rich PDZ-binding protein [Eucalyptus grandis] gb|KCW76930.1|

Alignment

This contig is upended


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JMFN019K13-                                                                      C
                      ____________________________________________________________
consensus                                                                        C
 
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rJMFF033A06+                                                               GGGTCCG
rJMFF032B21+                                                                GGTCCG
JMFF032B21-                                                                 GGTCCG
rJMSF001H15+                                                               GGGTCCG
JMSF005I24-                                                                GGGTCCG
JMFN019K13-           CGCATCGACCTAGGAAGGCATATATATTAATTAACTTCTGCCCGATTTCCATCGGGTCCG
JMFF033A06-                                                                GGGTCCG
JMFF046E16-                                                                GGGTCCG
JMSF047I24-                                                                   TCCG
                      ____________________________________________________________
consensus             CGCATCGACCTAGGAAGGCATATATATTAATTAACTTCTGCCCGATTTCCATCGGGTCCG
 
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rJMFF033A06+          TGACTCCGTGTAGCCTTGGCTCTTACCTCTGTTCAATTTTCTGGTTCACCTTCGATTCAG
rJMFF032B21+          TGGCTCCGTGTAGCCTTGGCTCTTACCTCTGTTCAATTTTNTGGTTCACCTTCGATTCAG
JMFF032B21-           TGGCTCCGTGTAGCCTTGGCTCTTACCTCTGTTCAATTTTCTGGTTCACCTTCGATTCAG
rJMSF001H15+          TGACTCCGTGTAGCCTTGGCTCTTACCTCTGTTCAATTTTCTGGTTCACCTTCGATTCAG
JMSF005I24-           TGACTCCGTGTAGCCTTGGCTCTTACCTCTGTTCAATTTTCTGGTTCACCTTCGATTCAG
JMFN019K13-           TGACTCCGTGTAGCCTTGGCTCTTACCTCTGTTCAATTTTCTGGTTCACCTTCGATTCAG
JMFF033A06-           TGACTCCGTGTAGCCTTGGCTCTTACCTCTGTTCAATTTTCTGGTTCACCTTCGATTCAG
JMFF046E16-           TGACTCCGTGTAGCCTTGGCTCTCACCTCTGTTCAATTTTCTGGTTCACCTTCGATTCAG
JMFN034C23-                   TGTAGCCTTGGCTCTTACCTCTGTTCAATTTTCTGGTTCACCTTCGATTCAG
JMSF047I24-           TGACTCCGTGTAGCCTTGGCTCTTACCTCTGTTCAATTTTCTGGTTCACCTTCGATTCAG
                      ____________________________________________________________
consensus             TGACTCCGTGTAGCCTTGGCTCTTACCTCTGTTCAATTTTCTGGTTCACCTTCGATTCAG
 
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rJMFF033A06+          AGATACATCGCTGCACAAAAATGGTCTGCCAAAAGTGTGAGAAGAAGCTCGGGAAGGTGA
rJMFF032B21+          AGATACATCGCTGCACAAAAATGGTCTGCCAAAAGTGTGAGAAGAAGCTCGGGAAGGTGA
JMFF032B21-           AGATACATCGCTGCACAAAAATGGTCTGCCAAAAGTGTGAGAAGAAGCTCGGGAAGGTGA
rJMSF001H15+          AGATACATCGCTGCACAAAAATGGTCTGCCAAAAGTGTGAGAAGAAGCTCGGGAAGGTGA
rJMSF005I24+                                                             GGAAGGTGA
JMSF005I24-           AGATACATCGCTGCACAAAAATGGTCTGCC--AAGTGTGAGAAGAAGCTCGGGAAGGTGA
JMFN019K13-           AGATACATCGCTGCACAAAAATGGTCTGCCAAAAGTGTGAGAAGAAGCTCGGGAAGGTGA
JMFF033A06-           AGATACATCGCTGCACAAAAATGGTCTGCCAAAAGTGTGAGAAGAAGCTCGGGAAGGTGA
JMFF046E16-           AGATACATCGCTGCACAAAAATGGTCTGCCAAAAGTGTGAGAAGAAGCTCGGGAAGGTGA
JMFN034C23-           AGATACATCGCTGCACAAAAATGGTCTGCCAAAAGTGTGAGAAGAAGCTCGGGAAGGTGA
JMSF047I24-           AGATACATCGCTGCACAAAAATGGTCTGCCAAAAGTGTGAGAAGAAGCTCGGGAAGGTGA
                      ____________________________________________________________
consensus             AGATACATCGCTGCACAAAAATGGTCTGCCAAAAGTGTGAGAAGAAGCTCGGGAAGGTGA
 
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rJMFF033A06+          TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
rJMFF032B21+          TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
JMFF032B21-           TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
rJMSF001H15+          TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
rJMSF005I24+          TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
JMSF005I24-           TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
JMFN019K13-           TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
JMFF033A06-           TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
rJMFF046E16+            GTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
JMFF046E16-           TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
JMFN034C23-           TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
rJMSF047I24+                    CAAGTGGAAAGAAGGAGCTCATAACNNGANGGAAGGTGGAGGGCGCAAGA
JMSF047I24-           TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
                      ____________________________________________________________
consensus             TAGTGCCGGACAAGTGGAAAGAAGGAGCTCATAACACGACGGAAGGTGGAGGGCGCAAGA
 
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rJMFF033A06+          TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
rJMFF032B21+          TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
JMFF032B21-           TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
rJMSF001H15+          TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
rJMSF005I24+          TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
JMSF005I24-           TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
JMFN019K13-           TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
JMFF033A06-           TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
rJMFF046E16+          TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
JMFF046E16-           TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
JMFN034C23-           TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
rJMSF047I24+          TCAACGAGAATTAACTCCTNTTTAAGAAGNACNGATGGACNCCATATGGAAATNCCAAGT
JMSF047I24-           TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
                      ____________________________________________________________
consensus             TCAACGAGAATAAACTCCTCTCTAAGAAGAACAGATGGACACCATATGGAAATACCAAGT
 
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rJMFF033A06+          GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
rJMFF032B21+          GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
JMFF032B21-           GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
rJMSF001H15+          GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
rJMSF005I24+          GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
JMSF005I24-           GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
JMFN019K13-           GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
JMFF033A06-           GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
rJMFF046E16+          GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
JMFF046E16-           GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
JMFN034C23-           GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
rJMSF047I24+          GCATTATCTGTAAACAACAAGTACATCAAGATNCCANGTATTGTCNCACCTGTGNNTNCN
JMSF047I24-           GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
                      ____________________________________________________________
consensus             GCATTATCTGTAAACAACAAGTACATCAAGATGCCAAGTATTGTCACACCTGTGCTTACA
 
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rJMFF033A06+          GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
rJMFF032B21+          GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
JMFF032B21-           GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
rJMSF001H15+          GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
rJMSF005I24+          GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
JMSF005I24-           G                                                           
JMFN019K13-           GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
JMFF033A06-           GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
rJMFF046E16+          GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
JMFF046E16-           GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
JMFN034C23-           GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
rJMSF047I24+          GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGNCACCAAGTTATNCAAGCAAA
JMSF047I24-           GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
                      ____________________________________________________________
consensus             GCAAAGGAGTGTGTGCAATGTGTGGAAAGCAAGTTCTCGACACCAAGTTATACAAGCAAA
 
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rJMFF033A06+          GCAATGTATAAGAACACAAGCTTGGCTGGTCTGACTTCTACTAATGTCAAAACTCAAAAG
rJMFF032B21+          GCAATGTATAAGAACACAAGCTTGGCTGGTCTGACTTCTACTAATGTCAAAACTCAAAAG
JMFF032B21-           GCAATGTATAAGAACACAAGCTTGGCTGGTCTGACTTCTACTAATGTCAAAACTCAAAAG
rJMSF001H15+          GCAATGTATAAGAACACAAGCTTGGCTGGTCTGACTTCTACTAATGTCAAAACTCAAAAG
rJMSF005I24+          GCAANGTATAAGAACACAAGCTTGGCTGGTCTGACTTCTACTAATGTCAAAACTCAAAAG
rJMSF005G22+                                                   TAATGTCAAAACTCCAAAG
JMFN019K13-           GCAATGTATAAGAACACAAGCTTGGCTGGTCTGACTTCTACTAATGTCAAAACTCAAAAG
JMFF033A06-           GCAATGTATAAGAACACAAGCTTGGCTGGTCTGACTTCTACTAATGTCAAAACTCAAAAG
rJMFF046E16+          GCAATGTATAAGAACACAAGCTTGGCTGGTCTGACTTCTACTAATGTCAAAACTCAAAAG
JMFF046E16-           GCAATGTATAAGAACACAAGCTTGGCTGGTCTGACCTCTACTAATGTCAAAACTCAAAAG
JMFN034C23-           GCAATGTATAAGAACACAAGCTTGGCTGGTCTGACTTCTACTAATGTCAAAACTCAAAAG
rJMSF047I24+          --AATGTATNAGAACCCNAGCTTGGCTGGTNTGANTTTTATTAANGTCAAAACTCAAAAG
JMSF047I24-           --AATGTATAAGAACACAAGCTTGGCTGGTCTGACTTCTACTAATGTCAAAACTCAAAAG
                      ____________________________________________________________
consensus             GCAATGTATAAGAACACAAGCTTGGCTGGTCTGACTTCTACTAATGTCAAAACTCAAAAG
 
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rJMFF033A06+          ACTATGATGCCTTGTAATGTAATGGAACATACAGTAATTGTCGAAAATGGTGTTCTTTGC
rJMFF032B21+          ACTATGATGCCTTGTAATGTAATGGGACATACAGTAATTGTCGAAAATGGTGTTCTTTGC
JMFF032B21-           ACTATGATGCCTTGTAATGTAATGGGACATACAGTAATTGTCGAAAATGGTGTTCTTTGC
rJMSF001H15+          ACTATGATGCCTTGTAATGTAATGGAACATACAGTAATTGTCGAAAATGGTGTTCTTTGC
rJMSF005I24+          ACTATGATGCCTTGTAATGTAATGGAACATACAGTAATTGTCGAAAATGGTGTTCTTTGC
rJMSF005G22+          ACTCTGNTGCCTTGTAANGTAATGNAACATNCAGTAATTGTCGAAAATGGTGTTC     
JMFN019K13-           ACTATGATGCCTTGTAATGTAATGGAACATACAGTAATTGTCGAAAATGGTGTTCTTTGC
JMFF033A06-           ACTATGATGCCTTGTAATGTAATGGAACATACAGTAATTGTCGAAAATGGTGTTCTTTGC
rJMFF046E16+          ACTATGATGCCTTGTAATGTAATGGAACATACAGTAATTGTCGAAAATGGTGTTCTTTGC
JMFF046E16-           ACTATGATGCCTTGTAATGTAATGGAACATACAGTAATTGTCGAAAATGGTGTTCTTTGN
JMFN034C23-           ACTATGATGCCTTGTAATGTAATGGAACATACAGTAATTGTCGAAAATGGTGTTCTTTGC
rJMSF047I24+          ACTNTGATGCCTTGTAATNTAATGGAACNTNCAGTAATTGTNNAAAATGGNGTTCTNTGC
JMSF047I24-           ACTATGATGCCTTGTAATGTAATGGAACATACAGTAATTGTCGAAAATGGTGTTCTTTGC
                      ____________________________________________________________
consensus             ACTATGATGCCTTGTAATGTAATGGAACATACAGTAATTGTCGAAAATGGTGTTCTTTGC
 
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rJMFF033A06+          AACGCCTAGGTGCATGCTTTCTGTTTGTGCTAAATAACACCTTCATTGGATTACAATCTC
rJMFF032B21+          AACGCCTAGGTGCATGCTTTCTGTTTGTGCTAAATAACACCTTCATTGGATTACAATCTC
JMFF032B21-           AACGCCTAGGTGCATGCTTTCTGTTTGTGCTAAATAACACCTTCATTGGATTACNATCTC
rJMSF001H15+          AACGCCTAGGTGCATGCTTTCTGTTTGTGCTAAATAACACC                   
rJMSF005I24+          AACGCCTAGGTGCATGCTTTCTGTT                                   
JMFN019K13-           AACGCCTAGGTGCATGCTTTCTGTTTGTGCTAAATAACACCTTCATTGGATTACAATCTC
JMFF033A06-           AACGCCTAGGTGCATGCTTTCTGTTTGTGCTAAATAACACCTTCATTGGATTACAATCTC
rJMFF046E16+          AACGCCTAGGTGCATGCTTTCTGTTTGTGCTAAATAACACCTTCATTGGATTACAATCTC
JMFF046E16-           CACGCCTAGGTGCATGCTTTCTGTTTGTGCTAAATAACACCTTCATTGGATTACAATCTC
JMFN034C23-           AACGCCTAGGTGCATGCTTTCTGTTTGTGCTAAATAACACCTTCATTGGATTACAATCTC
rJMSF047I24+          AACGCCTAGGTGC                                               
JMSF047I24-           AACGCCTAGGTGCATGCTTTCTGTTTGTGCTAAATAACACCTTCATTGGATTACAATCTC
                      ____________________________________________________________
consensus             AACGCCTAGGTGCATGCTTTCTGTTTGTGCTAAATAACACCTTCATTGGATTACAATCTC
 
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rJMFF033A06+          ACTATTATCCTCAG                                              
rJMFF032B21+          ACTATTATCCTCAGGTTTCC                                        
JMFF032B21-           ACTATTATCCTC                                                
JMFN019K13-           ACTATTATCCTCAGGTTTCCTAG                                     
JMFF033A06-           ACTATTATCCTCAGGTTTCCTAG                                     
rJMFF046E16+          ACTATTATCCTCAGGTTTCCTAG                                     
JMFF046E16-           ACTATTATCCTCAGGTTTCCTAG                                     
JMFN034C23-           ACTATTATCCTCAGGTTTCCTAGTGATATGATTTTGTGTTTTTTTGACTCCT        
JMSF047I24-           ACTATTATCCTCAGGTTTCCTAGTGATATGATTTTGTGTTTTTTTGACTCCTATAAAANA
                      ____________________________________________________________
consensus             ACTATTATCCTCAGGTTTCCTAGTGATATGATTTTGTGTTTTTTTGACTCCTATAAAANA