Contig 002430:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF045A20+                   GTTTACCTAACAATTGCACAAATCCAGTTTTGACATGACATCCACTAGAGAC
                      ____________________________________________________________
consensus                     GTTTACCTAACAATTGCACAAATCCAGTTTTGACATGACATCCACTAGAGAC
 
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JMSF045A20+           TGCAGTAAGCCGAGACTCAGAGATGAATCAGAGTGAAGATACATTACTTTCAAAGTTAAG
                      ____________________________________________________________
consensus             TGCAGTAAGCCGAGACTCAGAGATGAATCAGAGTGAAGATACATTACTTTCAAAGTTAAG
 
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JMFN046L13+                                       TGGATCAGGGCAATTGCCATTGAACTGTGCTT
JMFN034J02+                                       TGGATCAGGGCAATTGCCATTGAACTGTGCTT
JMSF045A20+           TAGATCGGATCCCACCCATGAAGGACTTTGGATCAGGGCAATTGCCATTGAACTGTGCTT
                      ____________________________________________________________
consensus             TAGATCGGATCCCACCCATGAAGGACTTTGGATCAGGGCAATTGCCATTGAACTGTGCTT
 
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JMFN046L13+           GTGAAAAATCAAAGCCAGGATTCTCTTCTTGGAACCTTTGAAGCATGAGGCGCTTCTGTT
JMFN034J02+           G-GAAAAATCAAAGCCAGGATTCTCTTCTTGGAACCTTNGAAGCATGAGGCGCTTCTGTT
JMSF045A20+           GTGAAAAATCAAAGCCAGGATTCTCTTCTTGGAACCTTTGAAGCATGAGGCGCTTCTGTT
                      ____________________________________________________________
consensus             GTGAAAAATCAAAGCCAGGATTCTCTTCTTGGAACCTTTGAAGCATGAGGCGCTTCTGTT
 
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JMFN046L13+           CAAGGTCTGTGGTGTATGGATCCAACTGACCTTGACCCATGATAGGAGAAGACCATGTCT
JMFN034J02+           CAAGGTCTGTGGTGTATGGATCCAACTGACCTTGACCCATGATAGGAGAAGACCATGTCT
JMSF045A20+           CAAGGTCTGTGGTGTATGGATCCAACTGACCTTGACCCATGATAGGAGAAGACCATGTCT
                      ____________________________________________________________
consensus             CAAGGTCTGTGGTGTATGGATCCAACTGACCTTGACCCATGATAGGAGAAGACCATGTCT
 
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JMFN046L13+           GACCTTTATCCCTCTTCTGAAGGGTTACGTGCAGTATATCATCCTCTAAAGTCCAGAATG
JMFN034J02+           GACCTTTATCCCTCTTCTGAAGGGTTACGTGCAGTATATCATCCTCTAAAGTCCAGAATG
JMSF045A20+           GACCTTTATCCCTCTTCTGAAGGGTTACGTGCAGTATATCATCCTCTAAAGTCCAGAATG
                      ____________________________________________________________
consensus             GACCTTTATCCCTCTTCTGAAGGGTTACGTGCAGTATATCATCCTCTAAAGTCCAGAATG
 
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JMFN046L13+           AGCAGTCTGTCTTCACATGATTGGTAAGGTCATGATTGAGGTAAGGAGGGTTGCCTTTAA
JMFN034J02+           AGCAGTCTGTCTTCACATGATTGGTAAGGTCATGATTGAGGTAAGGAGGGTTGCCTTTAA
JMSF045A20+           AGCAGTCTGTCTTCACATGATTGGTAAGGTCATGATTGAGGTAAGGAGGGTTGCCTTTAA
                      ____________________________________________________________
consensus             AGCAGTCTGTCTTCACATGATTGGTAAGGTCATGATTGAGGTAAGGAGGGTTGCCTTTAA
 
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JMFN046L13+           TCCCAACTTCCAAATGTTTGGACTCGATTTTACAATAGAATAGCTTTTTGGGAACATTTT
JMFN034J02+           TCCCAACTTCCAAATGTTTGGACTCGATTTTACAATAGAATAGCTTTTTGGGAACATTTT
JMSF045A20+           TCCCAACTTCCAAATGTTTGGACTCGATTTTACAATAGAATAGCTTTTTGGGAACATTTT
                      ____________________________________________________________
consensus             TCCCAACTTCCAAATGTTTGGACTCGATTTTACAATAGAATAGCTTTTTGGGAACATTTT
 
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JMFN046L13+           CCGGGAGATTGATATAAATATTCAACTCTTCAAGCGTTTGGTCCCATTCAAAGACCTTCT
JMFN034J02+           CCGGGAGATTGATATAAATATTCAACTCTTCAAGCGTTTGGTCCCATTCAAAGACCTTCT
JMSF045A20+           CCGGGAGATTGATATAAATATTCAACTCTTCAAGCGTTTGGTCCCATTCAAAGACCTTCT
                      ____________________________________________________________
consensus             CCGGGAGATTGATATAAATATTCAACTCTTCAAGCGTTTGGTCCCATTCAAAGACCTTCT
 
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JMFN046L13+           GACCATTGTGGATGAAGCTATGGTGCTTCTCAGGGGCCAATTTTTCAGCCATTTCTTGAA
JMFN034J02+           GACCATTGTGGATGAAGCTATGGTGCTTCTCAGGGGCCAATTTTTCAGCCATTTCTTGAA
JMSF045A20+           GACCATTGTGGATGAAGCTATGGTGCTTCTCAGGGGCCAATTTTTCAGCCATTTCTTGAA
                      ____________________________________________________________
consensus             GACCATTGTGGATGAAGCTATGGTGCTTCTCAGGGGCCAATTTTTCAGCCATTTCTTGAA
 
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JMFN046L13+           GGTCTGGAGCTTTAATCTTACAATTTTCCTATTTCCCAGGATAGTTTGATTCCAATGTCT
JMFN034J02+           GGTCTGGAGCTTTAATCTTACAATTTTCCTATTTCCCAGGATAGTTTGATTCCAATGTCT
JMSF045A20+           GGTCTGGAGCTTTAATCTTACAATTTTCCTATTTCCCAGGATAGTTTGATTCCAATGTCT
                      ____________________________________________________________
consensus             GGTCTGGAGCTTTAATCTTACAATTTTCCTATTTCCCAGGATAGTTTGATTCCAATGTCT
 
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JMFN046L13+           TCGTCTGTTCGCAGAGGCTTCGATGCGGCGGAGCAGGCAGCCGGCGGCCGATCTCGGGTG
JMFN034J02+           TCGTCTGTTCGCAGAGGCTTCGATGCGGCGGAGCAGGCAGCCGGCGGCCGATCTCGGGTG
JMSF045A20+           TCGTCTGTTCGCAGAGGCTTCGATGCGGCGGAGCAGGCAGCCGGCGGCCGATCTCGGGTG
                      ____________________________________________________________
consensus             TCGTCTGTTCGCAGAGGCTTCGATGCGGCGGAGCAGGCAGCCGGCGGCCGATCTCGGGTG
 
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JMFN046L13+           AGTCTGGTTCAGCGAGGTGCGCAGCGGCGAGTAAGTTTGG                    
JMFN034J02+           AGTCTGGTTCAGCGAGGTGCGCAGCGGCGAGTAAGTTTGGGAGAGGGAGTTAGGGA    
JMSF045A20+           AGTCTGGTTCAGCGAGGTGCGCAGCGGCGAGTAAGTTTGGGAGAGGGAGTTAGGGACTTC
                      ____________________________________________________________
consensus             AGTCTGGTTCAGCGAGGTGCGCAGCGGCGAGTAAGTTTGGGAGAGGGAGTTAGGGACTTC