| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015C24 | Sequence | 580 | 002425 (8) | ref|XP_011469507.1| | 1e-84 | PREDICTED: cinnamoyl-CoA reductase 1-like [Fragaria vesca subsp. vesca] | 764 | 001231 (10) | ref|XP_006345416.1| | 9e-57 | PREDICTED: cinnamoyl-CoA reductase 1-like [Solanum tuberosum] |
| JMFF016A07 | Sequence | 565 | 002425 (8) | ref|XP_011469507.1| | 3e-83 | PREDICTED: cinnamoyl-CoA reductase 1-like [Fragaria vesca subsp. vesca] | 712 | 001231 (10) | ref|XP_009611351.1| | 9e-70 | PREDICTED: cinnamoyl-CoA reductase 1-like [Nicotiana tomentosiformis] |
| JMFF046J11 | Sequence | 556 | 002425 (8) | ref|XP_011469507.1| | 9e-82 | PREDICTED: cinnamoyl-CoA reductase 1-like [Fragaria vesca subsp. vesca] | 446 | 001231 (10) | emb|CBI32940.3| | 5e-20 | unnamed protein product [Vitis vinifera] |
| JMFF049A17 | Sequence | 457 | 002425 (8) | gb|EYU27030.1| | 4e-64 | hypothetical protein MIMGU_mgv1a020119mg, partial [Erythranthe guttata] | 451 | 001231 (10) | emb|CBI32940.3| | 9e-21 | unnamed protein product [Vitis vinifera] |
| JMSF007I18 | Sequence | 388 | 002425 (8) | gb|EYU27030.1| | 4e-56 | hypothetical protein MIMGU_mgv1a020119mg, partial [Erythranthe guttata] | 387 | 005190 (53) | ref|XP_006359860.1| | 2e-47 | PREDICTED: probable pectinesterase/pectinesterase inhibitor 40-like [Solanum tu |
| JMSF016D11 | Sequence | 495 | 002425 (8) | ref|XP_011469507.1| | 8e-52 | PREDICTED: cinnamoyl-CoA reductase 1-like [Fragaria vesca subsp. vesca] | 771 | 001231 (10) | ref|XP_006345416.1| | 2e-86 | PREDICTED: cinnamoyl-CoA reductase 1-like [Solanum tuberosum] |
| JMSF041H01 | Sequence | 423 | 002425 (8) | ref|XP_006345416.1| | 2e-41 | PREDICTED: cinnamoyl-CoA reductase 1-like [Solanum tuberosum] | 736 | 004409 (3) | ref|XP_004299809.1| | 1e-54 | PREDICTED: uncharacterized protein LOC101295420 isoform X1 [Fragaria vesca subs |
| JMSF044N02 | Sequence | 721 | 002425 (8) | ref|XP_010323594.1| | 1e-106 | PREDICTED: alcohol dehydrogenase-like isoform X1 [Solanum lycopersicum] | 702 | 001231 (10) | ref|XP_009611351.1| | 1e-76 | PREDICTED: cinnamoyl-CoA reductase 1-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF044N02+ C
____________________________________________________________
consensus C
. : . : . : . : . : . :
JMSF044N02+ TCTAACATCAACATAGCAATTGAATGGGGAAGACATGAACTCCCTTCCTTCTTTTATGGT
____________________________________________________________
consensus TCTAACATCAACATAGCAATTGAATGGGGAAGACATGAACTCCCTTCCTTCTTTTATGGT
. : . : . : . : . : . :
JMSF044N02+ GTCCAGAATCATCTCACTTGAAAAATTAAGAATTGGTTGTAAAAGAGGGCCAATAACAAG
____________________________________________________________
consensus GTCCAGAATCATCTCACTTGAAAAATTAAGAATTGGTTGTAAAAGAGGGCCAATAACAAG
. : . : . : . : . : . :
JMFF016A07+ TATTCTCCCCAGCATATTTCCATGCTGCTTC
JMFF015C24+ AAACCATGTCGATCCTATTCTCCCCAGCATATTTCCATGCTGCTTC
JMFF046J11+ CAGCATATTTCCATGCTGCTTC
JMSF044N02+ AGCAGGGTGCAGTGAAACCATGTCGATCCTATTCTCCCCAGCATATTTCCATGCTGCTTC
____________________________________________________________
consensus AGCAGGGTGCAGTGAAACCATGTCGATCCTATTCTCCCCAGCATATTTCCATGCTGCTTC
. : . : . : . : . : . :
JMFF016A07+ CTCAGCAAAGACTTTAGACAAGATATACCATTGCTTTGTTTCCTCTGCAAATTCTTTATC
JMFF015C24+ CTCAGCAAAGACTTTAGACAAGATATACCATTGCTTTGTTTCCTCTGCAAATTCTTTATC
JMSF016D11+ TCTGCAAATTCTTTATC
JMFF046J11+ CTCAGCAAAGACTTTAGACAAGATATACCATTGCTTTGTTTCCTCTGCAAATTCTTTATC
JMSF044N02+ CTCAGCAAAGACTTTAGACAAGATATACCATTGCTTTGTTTCCTCTGCAAATTCTTTATC
____________________________________________________________
consensus CTCAGCAAAGACTTTAGACAAGATATACCATTGCTTTGTTTCCTCTGCAAATTCTTTATC
. : . : . : . : . : . :
JMFF016A07+ AGAAAACCAAGTGTCATCGATTACGTCAGTTGGACTTATAGGATTTGGTTTGTACATAAT
JMFF015C24+ AGAAAACCAAGTGTCATCGATTACGTCAGTTGGACTTATAGGATTTGGTTTGTACATAAT
JMFF049A17+ CGATTACGTCAGTGGGACTTATAGGATTTGGTTTGTACATAAT
JMSF016D11+ AGAAAACCAAGTGTCATCGATTACGTCAGTTGGACTTATAGGATTTGGTTTGTACATAAT
JMFF046J11+ AGAAAACCAAGTGTCATCGATTACGTCAGTTGGACTTATAGGATTTGGTTTGTACATAAT
JMSF044N02+ AGAAAACCAAGTGTCATCGATTACGTCAGTTGGACTTATAGGATTTGGTTTGTACATAAT
____________________________________________________________
consensus AGAAAACCAAGTGTCATCGATTACGTCAGTTGGACTTATAGGATTTGGTTTGTACATAAT
. : . : . : . : . : . :
JMFF016A07+ GGTTGCCGTTGAGGACGTCAGCACTATTCTTTTCACAGAAGGTGTTCTCACACATGATTC
JMFF015C24+ GGTTGCCGTTGAGGACGTCAGCACTATTCTTTTCACAGAAGGTGTTCTCACACATGATTC
JMFF049A17+ GGTGGCCGTTGAGGACGTCAGCACTATTCTTTTCACAGAAGGTGTTCTCACACATGATTC
JMSF016D11+ GGTTGCCGTTGAGGACGTCAGCACTATTCTTTTCACAGAAGGTGTTCTCACACATGATTC
JMFF046J11+ GGTTGCCGTTGAGGACGTCAGCACTATTCTTTTCACAGAAGGTGTTCTCACACATGATTC
JMSF007I18+ TCACAGAAGGTGTTCTCACACATGATTC
JMSF044N02+ GGTTGCCGTTGAGGACGTCAGCACTATTCTTTTCACAGAAGGTGTTCTCACACATGATTC
____________________________________________________________
consensus GGTTGCCGTTGAGGACGTCAGCACTATTCTTTTCACAGAAGGTGTTCTCACACATGATTC
. : . : . : . : . : . :
JMFF016A07+ AAGAACGTTTAGTGTCCCATTTACTGCAGGACTCACTAGCTCTGCCTTAGTTGCAGATGG
JMFF015C24+ AAGAACGTTTAGTGTCCCATTTACTGCAGGACTCACTAGCTCTGCCTTAGTTGCAGATGG
JMFF049A17+ AAGAACGTTTAGTGTCCCATTTACTGCAGGACTCACTAGCTCTGCCTTAGTTGCAGATGG
JMSF016D11+ AAGAACGTTTAGTGTCCCATTTACTGCAGGACTCACTAGCT----CTTAGTTGCAGATGG
JMSF041H01+ CCTTAGTTGCTGATGG
JMFF046J11+ AAGAACGTTTAGTGTCCCATTTACTGCAGGACTCACTAGCTCTGCCTTAGTTGCAGATGG
JMSF007I18+ AAGAACGTTTAGTGTCCCATTTACTGCAGGACTCACTAGCTCTGCCTTAGTTGCAGATGG
JMSF044N02+ AAGAACGTTTAGTGTCCCATTTACTGCAGGACTCACTAGCTCTGCCTTAGTTGCAGATGG
____________________________________________________________
consensus AAGAACGTTTAGTGTCCCATTTACTGCAGGACTCACTAGCTCTGCCTTAGTTGCAGATGG
. : . : . : . : . : . :
JMFF016A07+ TGAAAAAGAAACAGGTGATGCTGTGTGGAAAACACCTTCACACCCATTAATTGCAGAATC
JMFF015C24+ TGAAAAAGAAACAGGTGATGCTGTGCGGAAAACACCTTCACACCCATTAATTGCAGAATC
JMFF049A17+ TGAAAAAGAAACAGGTGATGCTGTGTGGAAAACACCTTCACACCCATTAATTGCAGAATC
JMSF016D11+ TGAAAAAGAAACAGGTGATGCTGTGTGGAAAACACCTTCACACCCATTAATTGCAGAATC
JMSF041H01+ TGATAAATCTACAGGTGATGCTGTGTGAAAAACACCTTCACATCCATTAATTGCATCATC
JMFF046J11+ TGAAAAAGAAACAGGTGATGCTGTGTGGAAAACACCTTCACACCCATTAATTGCAGAATC
JMSF007I18+ TGAAAAAGAAACAGGTGATGCTGTGTGGAAAACACCTTCACACCCATTAATTGCAGAATC
JMSF044N02+ TGAAAAAGAAACAGGTGATGCTGTGTGGAAAACACCTTCACACCCATTAATTGCAGAATC
____________________________________________________________
consensus TGAAAAAGAAACAGGTGATGCTGTGTGGAAAACACCTTCACACCCATTAATTGCAGAATC
. : . : . : . : . : . :
JMFF016A07+ AAAAGAGTTTTCCTCAACTAAGTCAGCTTCAAACAAATGCAGTCTTTCTTTGGCACCATC
JMFF015C24+ AAAAGAGTTTTCCTCAACTAAGTCAGCTTCAAACAAATGCAGTCTTTCTTTGGCACCATC
JMFF049A17+ AAAAGAGTTTTCCTCAACTAAGTCAGCTTCAAACAAATGCAGTCTTTCTTTGGCACCATC
JMSF016D11+ AAAAGAGTTTTCCTCAACTAAGTCAGCTTCAAACAAATGCAGTCTTTCTTTGGCACCATC
JMSF041H01+ AAAAGAGTTTTCCTTAAGTAAGTCGGCTTCAAACAAATGCAATCTTTCCTTAGCACCATC
JMFF046J11+ AAAAGAGTTTTCCTCAACTAAGTCAGCTTCAAACAAATGCAGTCTTTCTTTGGCACCATC
JMSF007I18+ AAAAGAGTTTTCCTCAACTAAGTCAGCTTCAAACAAATGCAGTCTTTCTTTGGCACCATC
JMSF044N02+ AAAAGAGTTTTCCTCAACTAAGTCAGCTTCAAACAAATGCAGTCTTTCTTTGGCACCATC
____________________________________________________________
consensus AAAAGAGTTTTCCTCAACTAAGTCAGCTTCAAACAAATGCAGTCTTTCTTTGGCACCATC
. : . : . : . : . : . :
JMFF016A07+ TAATGCAAGAAGATGTGACACCTTATTTGGATCCTTGAGGCTGCGAACGGTGGCGTGGAC
JMFF015C24+ TAATGCAAGAAGATGTGACACCTTATTTGGATCCTTGAGGCTGCGAACGGTGGCGTGGAC
JMFF049A17+ TAATGCAAGAAGATGTGACACCTTATTTGGATCCTTGAGGCTGCGAACGGTGGCGTGGAC
JMSF016D11+ TAATGCAAGAAGATGTGACACCTTATTTGGATCCTTGAGGCTGCGAACGGTGGCGTGGAC
JMSF041H01+ TAATGCAAGAAGATGTGACACCTTACTTGGAACCTTGAGGCTGCGAATGGTGGCGTGGAC
JMFF046J11+ TAATGCAAGAAGATGTGACACCTTATTTGGATCCTTGAGGCTGCGAACGGTGGCGTGGAC
JMSF007I18+ TAATGCAAGAAGATGTGACACCTTATTTGGATCCTTGAGGCTGCGAACGGTGGCGTGGAC
JMSF044N02+ TAATGCAAGAAGATGTGACACCTTATTTGGATCCTTGAGGCTGCGAACGGTGGCGTGGAC
____________________________________________________________
consensus TAATGCAAGAAGATGTGACACCTTATTTGGATCCTTGAGGCTGCGAACGGTGGCGTGGAC
. : . : . : . : . : . :
JMFF016A07+ GGTGTAACCACGGTGGAGCAAAAGCTTGACGAGCCAAGAAGCTATGAAGCCGGAAGCACC
JMFF015C24+ GGTGTAACCACGGTGGAGCAAAAGCTTGACGAGCCAAGAAGCTATGAAGCCGGAAGCACC
JMFF049A17+ GGTGTAACCACGGTGGAGCAAAAGCTTGACGAGCCAAGAAGCTATGAAGCCGGAAGCACC
JMSF016D11+ GGTGTAACCACGGTGGAGCAAAAGCTTGACGAGCCAAGAAGCTATGAAGCCGGAAGCACC
JMSF041H01+ GGTGTAACCACGGTGGAGCAAAAGCTTGACGAGCCAAGAAGCTATGAAGCCGGAAGCACC
JMFF046J11+ GGTGTAACCACGGTGGAGCAAAAGCTTGACGAGCCAAGAAGCTATGAAGCCGGAAGCACC
JMSF007I18+ GGTGTAACCACGGTGGAGCAAAAGCTTGACGAGCCAAGAAGCTATGAAGCCGGAAGCACC
JMSF044N02+ GGTGTAACCACGGTGGAGCAAAAGCTTGACGAGCCAAGAAGCTATGAAGCCGGAAGCACC
____________________________________________________________
consensus GGTGTAACCACGGTGGAGCAAAAGCTTGACGAGCCAAGAAGCTATGAAGCCGGAAGCACC
. : . : . : . : . : . :
JMFF016A07+ GGTCACGCATACCACCTTCCCCTCACCGCTCATCCTCTTCTTTTAGATAATAAT
JMFF015C24+ GGTCACGCATACCACCTTCCCCTCACCGCTCATCCTCTTCTTTTAGATAATAAT
JMFF049A17+ GGTCACGCATACCACCTTCCCCTCACCGCTCATCCTCTTCTTTTAGATAATAAT
JMSF016D11+ GGTCACGCATACCACCTTCCCCTCACCGCTCATCCTCT
JMSF041H01+ GGTCACGCATAC
JMFF046J11+ GGTCACGCATACCACCTTCCCCTCACCGCTCATCCTCTTCTTTTAGATAATAAT
JMSF007I18+ GGTCACGCATACCACCTTCCCCTCACCGCTCATCCTCTTCTTTTAGATAATAAT
JMSF044N02+ GGTCACGCATACCAACTTCCCCTCACCGCTCATCCTCTTCTTTTAGATAATAATAAACCC
____________________________________________________________
consensus GGTCACGCATACCACCTTCCCCTCACCGCTCATCCTCTTCTTTTAGATAATAATAAACCC