| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030N03 | Sequence | 490 | 002421 (7) | ref|XP_010247888.1| | 7e-71 | PREDICTED: transcription factor Pur-alpha 1-like isoform X2 [Nelumbo nucifera] | 750 | 002421 (7) | gb|KDP30645.1| | 3e-82 | hypothetical protein JCGZ_16210 [Jatropha curcas] |
| JMFF043J14 | Sequence | 619 | 002421 (7) | ref|XP_010247888.1| | 8e-75 | PREDICTED: transcription factor Pur-alpha 1-like isoform X2 [Nelumbo nucifera] | 604 | 002421 (7) | emb|CBI16575.3| | 3e-82 | unnamed protein product [Vitis vinifera] |
| JMFN029M08 | Sequence | 596 | 002421 (7) | ref|XP_010247888.1| | 2e-77 | PREDICTED: transcription factor Pur-alpha 1-like isoform X2 [Nelumbo nucifera] | |||||
| JMSF044K05 | Sequence | 665 | 002421 (7) | ref|XP_010247888.1| | 2e-81 | PREDICTED: transcription factor Pur-alpha 1-like isoform X2 [Nelumbo nucifera] | 822 | 002421 (7) | emb|CBI16575.3| | 5e-109 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF030N03- AGAGTTAACATAGCACATTTAACACCAGGAAT
____________________________________________________________
consensus AGAGTTAACATAGCACATTTAACACCAGGAAT
. : . : . : . : . : . :
rJMFF030N03- TACAGACTTACTACTGTATTTCTTATTGCCTCTCACTTCACATTCACACTTGACAATCGA
rJMSF044K05- ACTTACTACTGTATTTCTTATTGCCTCTCACTTCACATTCACACTTGACAATCGA
____________________________________________________________
consensus TACAGACTTACTACTGTATTTCTTATTGCCTCTCACTTCACATTCACACTTGACAATCGA
. : . : . : . : . : . :
rJMFF030N03- ATACTTTGTATACTAAGCTACACCATACAGATAGATAACCCGCTTTATTTAACTTCAATT
rJMFF043J14- AGATAACCCGCTTTATTTAACTTCAATT
rJMSF044K05- ATACTTTGTATACTAAGCTACACCATACAGATAGATAACCCGCTTTATTTAACTTCAATT
____________________________________________________________
consensus ATACTTTGTATACTAAGCTACACCATACAGATAGATAACCCGCTTTATTTAACTTCAATT
. : . : . : . : . : . :
rJMFF030N03- CAATTCAAATCAACAATGAAAAGCCAGACAATTAACATCTATCAGTCTCGTATGAGTAGG
rJMFF043J14- CAATTCAAATCAACAATGAAAAGCCAGACAATTAACATCTATCAGTCTCGTATGAGTAGG
rJMSF044K05- CAATTCAAATCAACAATGAAAAGCCAGACAATTAACATCTATCAGTCTCGTATGAGTAGG
____________________________________________________________
consensus CAATTCAAATCAACAATGAAAAGCCAGACAATTAACATCTATCAGTCTCGTATGAGTAGG
. : . : . : . : . : . :
rJMFF030N03- GAAGTACCAGTTTCCATCTGGAGTCTAAGCACTAATATCAGCATTCATCTATGAGGAGGA
rJMFF043J14- GAAGTACCAGTTTCCATCTGGAGTCTAAGCACTAATATCAGCATTCATCTATGAGGAGGA
rJMSF044K05- GAAGTACCAGTTTCCATCTGGAGTCTAAGCACTAATATCAGCATTCATCTATGAGGAGGA
____________________________________________________________
consensus GAAGTACCAGTTTCCATCTGGAGTCTAAGCACTAATATCAGCATTCATCTATGAGGAGGA
. : . : . : . : . : . :
rJMFF030N03- TCCACTGTCCTAACATTTGCGCCCCTCATCCCTTCGATCCTATCTTTCGTGATCTCAACA
rJMFF043J14- TCCACTGTCCTAACATTTGCGCCCCTCATCCCTTCGATCCTATCTTTCGTGATCTCAACA
rJMSF044K05- TCCACTGTCCTAACATTTGCGCCCCTCATCCCTTCGATCCTATCTTTCGTGATCTCAACA
____________________________________________________________
consensus TCCACTGTCCTAACATTTGCGCCCCTCATCCCTTCGATCCTATCTTTCGTGATCTCAACA
. : . : . : . : . : . :
rJMFF030N03- AAGTGACCCACCATTTCGTGAACCTGCTGTAGCCCTGACAATGGGAGAATGATGGAAGAG
rJMFF043J14- AAGTGACCCACCATTTCGTGAACCTGCTGTAGCCCTGACAATGGGAGAATGATGGAAGAG
rJMSF044K05- AAGTGACCCACCATTTCGTGAACCTGCTGTAGCCCTGACAATGGGAGAATGATGGAAGAG
____________________________________________________________
consensus AAGTGACCCACCATTTCGTGAACCTGCTGTAGCCCTGACAATGGGAGAATGATGGAAGAG
. : . : . : . : . : . :
rJMFF030N03- CGATCAGAACCCGCCACCTCAGATATTCTCAGGAAGTGGCCTCTGCTGTTGCTTCCAAGA
rJMFF043J14- CGATCAGAACCCGCCACCTCAGATATTCTCAGGAAGTGGCCTCTGCTGTTGCTTCCAAGA
rJMSF044K05- CGATCAGAACCCGCCACCTCAGATATTCTCAGGAAGTGGCCTCTGCTGTTGCTTCCAAGA
____________________________________________________________
consensus CGATCAGAACCCGCCACCTCAGATATTCTCAGGAAGTGGCCTCTGCTGTTGCTTCCAAGA
. : . : . : . : . : . :
rJMFF030N03- TCAAAGAAGAATCTCTTCTGGTCAACTCTGATTACCTTAGAGACCGCTAAGTTATTAATT
rJMFF043J14- TCAAAGAAGAATCTCTTCTGGTCAACTCTGATTACCTTAGAGACCGCTAAGTTATTAATT
rJMSF044K05- TCAAAGAAGAATCTCTTCTGGTCAACTCTGATTACCTTAGAGACCGCTAAGTTATTAATT
____________________________________________________________
consensus TCAAAGAAGAATCTCTTCTGGTCAACTCTGATTACCTTAGAGACCGCTAAGTTATTAATT
. : . : . : . : . : . :
rJMFF030N03- TCTTCGGGTCCTGCCAAATCAACGGAGTGGTCTATATTCAAGTTAGCTTTTGGAGCAGGC
rJMFF043J14- TCTTCGGGTCCTGCCAAATCAACGGAGTGGTCTATATTCAAGTTAGCTTTTGGAGCAGGC
rJMSF044K05- TCTTCGGGTCCTGCCAAATCAACGGAGTGGTCTATATTCAAGTTAGCTTTTGGAGCAGGC
____________________________________________________________
consensus TCTTCGGGTCCTGCCAAATCAACGGAGTGGTCTATATTCAAGTTAGCTTTTGGAGCAGGC
. : . : . : . : . : . :
rJMFF030N03- TGAGAGGCGTGGCTGGATATGAAACCAGCCCCTACATCATCCGAAAGTCCTAGATGTTCT
rJMFF043J14- TGAGAGGTGTGGCTGGATATGAAACCAGCCCCTACATCATCCGAAAGTCCTAGATGTTCT
rJMSF044K05- TGAGAGGTGTGGCTGGATATGAAACCAGCCCCTACATCATCCGAAAGTCCTAGATGTTCT
____________________________________________________________
consensus TGAGAGGTGTGGCTGGATATGAAACCAGCCCCTACATCATCCGAAAGTCCTAGATGTTCT
. : . : . : . : . : . :
rJMFF030N03- GAAGTTTCAGAAGCTTGCTGTTTTAACTGATTGGGCACGATATAAAGGCTCAAGGGTTCA
rJMFF043J14- GAAGTTTCAGAAGCTTG---------CTGATTGGGCACGATATAAAGGCTCAAGGTTTCA
rJMSF044K05- GAAGTTTCAGAAGCTTG---------CTGATTGGGCACGATATAAAGGCTCAAGGTTTCA
JMSF044K05+ TTTCA
____________________________________________________________
consensus GAAGTTTCAGAAGCTTG---------CTGATTGGGCACGATATAAAGGCTCAAGGTTTCA
. : . : . : . : . : . :
rJMFF030N03- TTTATTTCTGCCNAAATATTCCTAAATGTTGCCCATCCCTCATCTCGAGCACTTCCTG
rJMFF043J14- TTTATTTCTGCCAAAATATTCCTAAATGTTGCCCATCCCTCATCT
rJMSF044K05- TTTATTTCTGCCAAAATATTCCTAAATGTTGCCCATCCCTCATCTCGAGCACTTCCTGCC
JMFF030N03+ ATCTCGAGCACTTCCTGCC
JMFN029M08+ TGCCAAAATATTCGTAAATGGTGCCCATCCCTCGTCTCGAGCACTTCCTGCC
JMFF043J14+ AAATGTTGCCCATCCCTCATCTCGAGCACTTCCTGCC
JMSF044K05+ TTTATTTCTGCCAAAATATTCCTAAATGTTGCCCATCCCTCATCTCGAGCACTTCCTGCC
____________________________________________________________
consensus TTTATTTCTGCCAAAATATTCCTAAATGTTGCCCATCCCTCATCTCGAGCACTTCCTGCC
. : . : . : . : . : . :
rJMSF044K05- GGGACAATAATAGTACTGCGATTTCTATTAACTGAAGCTTCAGATACCTTGAGAAAACGG
JMFF030N03+ GGGACAATAATAGTACTGCGATTTCTATTAACTGAAGCTTCAGATACCTTGAGAAAACGG
JMFN029M08+ GGGACAATAATAGTACTGCGATTTCTATTAACTGAAGCTTCAGATACCTTGAGAAAACGG
JMFF043J14+ GGGACAATAATAGTACTGCGATTTCTATTAACTGAAGCTTCAGATACCTTGAGAAAACGG
JMSF044K05+ GGGACAATAATAGTACTGCGATTTCTATTAACTGAAGCTTCAGATACCTTGAGAAAACGG
____________________________________________________________
consensus GGGACAATAATAGTACTGCGATTTCTATTAACTGAAGCTTCAGATACCTTGAGAAAACGG
. : . : . : . : . : . :
rJMSF044K05- CCCCTCCTATTCTCACCAATATCGAAATAAAAGACCTT
JMFF030N03+ CCCCTCCTATTCTCACCAATATCGAAATAAAAGACCTTGGAGTCGAGCTGGAGTTCTTTG
JMFN029M08+ CCCCTCCTATTCTCACCAATATCGAAATAAAAGACCTTGGAGTCGAGCTGGAGTTCTTTG
JMFF043J14+ CCCCTCCTATTCTCACCAATATCGAAATAAAAGACCTTGGAGTCGAGCTGGAGTTCTTTG
JMSF044K05+ CCCCTCCTATTCTCACCAATATCGAAATAAAAGACCTTGGAGTCGAGCTGGAGTTCTTTG
____________________________________________________________
consensus CCCCTCCTATTCTCACCAATATCGAAATAAAAGACCTTGGAGTCGAGCTGGAGTTCTTTG
. : . : . : . : . : . :
JMFF030N03+ CTATAGACTTCCTGGTCGTCGTGGTCGGAATTGACGTAGTAATTGAAGAGATCGAGAAAC
JMFN029M08+ CTATAGACTTCCTGGTCGTGGTGGTCGGAATTGACGTAGTAATTGAAGAGATCGAGAAAC
JMFF043J14+ CTATAGACTTCCTGGTCGTCGTGGTCGGAATTGACGTAGTAATTGAAGAGATCGAGAAAC
JMSF044K05+ CTATAGACTTCCTGGTCGTCGTGGTCGGAATTGACGTAGTAATTGAAGAGATCGAGAAAC
____________________________________________________________
consensus CTATAGACTTCCTGGTCGTCGTGGTCGGAATTGACGTAGTAATTGAAGAGATCGAGAAAC
. : . : . : . : . : . :
JMFF030N03+ CAGGAGATGCCGGCGGAGGGGACGATGATGGTGGAGCGCGTGGAGGAGGTTTTCTCCGAG
JMFN029M08+ CAGGAGATGCCGGCGGAGGGGACGATGATGGTGGAGCGCGTGGAGGAGGTTTTCTCCGAG
JMFF043J14+ CAGGAGATGCCGGCGGAGGGGACGATGATGGTGGAGCGCGTGGAGGAGGTTTTCTCCGAG
JMSF044K05+ CAGGAGATGCCGGCGGAGGGGACGATGATGGTGGAGCGCGTGGAGGAGGTTTTCTCCGAG
____________________________________________________________
consensus CAGGAGATGCCGGCGGAGGGGACGATGATGGTGGAGCGCGTGGAGGAGGTTTTCTCCGAG
. : . : . : . : . : . :
JMFF030N03+ ATCTTGAGGTACCGCCCGCGAGGATTCTCCTTGAGATCAAAATAGAAGAGTTTGTGTTCC
JMFN029M08+ ATCTTGAGGTACCGCCCGCGAGGATTCTCCTTGAGATCAAAATAGAAGAGTTTGTGTTCC
JMFF043J14+ ATCTTGAGGTACCGCCCGCGAGGATTCTCCTTGAGATCAAAATAGAAGAGTTTGTGTTCC
JMSF044K05+ ATCTTGAGGTACCGCCCGCGAGGATTCTCCTTGAGATCAAAATAGAAGAGTTTGTGTTCC
____________________________________________________________
consensus ATCTTGAGGTACCGCCCGCGAGGATTCTCCTTGAGATCAAAATAGAAGAGTTTGTGTTCC
. : . : . : . : . : . :
JMFF030N03+ ACCTGCAGCGTCTTCGACAGAAGCTCCACGTCGTTTCCTCCGCCGCCGGAATTCCCCTCC
JMFN029M08+ ACCTGCAGCGTCTTCGACAGAAGCTCCACGTCGTTTCCTCC
JMFF043J14+ ACCTGCAGCGTCTTCGACAGAAGCTCCACGTCGTTTCCTCC
JMSF044K05+ ACCTGCAGCGTCTTCGACAGAAGCTCCACGTCGTTTCCTCCGCCGCCGGAATTCCCCTCC
____________________________________________________________
consensus ACCTGCAGCGTCTTCGACAGAAGCTCCACGTCGTTTCCTCCGCCGCCGGAATTCCCCTCC
. : . : . : . : . : . :
JMFF030N03+ ATCAACTCCTCCTCTGCCGGAAAAATTGACCTCGAAATTGAAGCTCGAAACGCAGATGTT
JMSF044K05+ ATCAACTCCTCCTCTGCCGGAAAAATTGACCTCGAAATTGAAGCTCGAAACGCAGATGTT
____________________________________________________________
consensus ATCAACTCCTCCTCTGCCGGAAAAATTGACCTCGAAATTGAAGCTCGAAACGCAGATGTT
. : . : . : . : . : . :
JMFF030N03+ GAAGGGAATTAATGTTTGGGAAGCATTGAATTTGTTGAAGCTAGCGAAAAT
JMSF044K05+ GAAGGGAATTAATGTTTGGGAAGCATTGAATTTGTTGAAGCTAGCGAAAATGGGAGGAGC
____________________________________________________________
consensus GAAGGGAATTAATGTTTGGGAAGCATTGAATTTGTTGAAGCTAGCGAAAATGGGAGGAGC
. : . : . : . : . : . :
JMSF044K05+ AGTGATAGGTGGAAGTGGAAGGAGAGTGCATATTTTTCAGTGGAGCGGTACCCACGAAAC
____________________________________________________________
consensus AGTGATAGGTGGAAGTGGAAGGAGAGTGCATATTTTTCAGTGGAGCGGTACCCACGAAAC
. : . : . : . : . : . :
JMSF044K05+ AGCCATGGCTGACTGCCGTGTTTTCTTATCCCAATGATTGACAAGAAAATGACAACACTC
____________________________________________________________
consensus AGCCATGGCTGACTGCCGTGTTTTCTTATCCCAATGATTGACAAGAAAATGACAACACTC