Contig 002419:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047C06Sequence321002419 (3)ref|XP_004151854.1|90.1PREDICTED: tuftelin-interacting protein 11-like [Cucumis sativus] gb|KGN63340.1|372005803 (2)ref|XP_011098023.1|5e-23PREDICTED: septin and tuftelin-interacting protein 1 homolog 1 [Sesamum indicum
JMFS069F03Sequence627002419 (3)ref|XP_004151854.1|120PREDICTED: tuftelin-interacting protein 11-like [Cucumis sativus] gb|KGN63340.1|
JMSF044E12Sequence722002419 (3)emb|CDP06007.1|7e-38unnamed protein product [Coffea canephora]794005803 (2)ref|XP_004248294.1|4e-31PREDICTED: septin and tuftelin-interacting protein 1 homolog 1 [Solanum lycoper

Alignment

This contig is upended


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JMSF044E12+                                                                     TC
                      ____________________________________________________________
consensus                                                                       TC
 
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JMFS069F03+                                                  AGGGAAGAAAATTGTCAACAT
JMSF044E12+           TCAACAGTGCGCCTTCCTTGATCTTCTTTCCAAAAGCAGAGGGAAGAAAATTGTCAACAT
                      ____________________________________________________________
consensus             TCAACAGTGCGCCTTCCTTGATCTTCTTTCCAAAAGCAGAGGGAAGAAAATTGTCAACAT
 
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JMFS069F03+           CTCCATCTCCATCCCCAGGAGTGGTCTNTGAACCAAATCCAAGGCCAGAA---GATGCTC
JMSF044E12+           CTCCCTCTCCATCCCCATGAGTGGTCTTTGAACCAAATCCAAGGCCAGAAGATGATGCTC
                      ____________________________________________________________
consensus             CTCCCTCTCCATCCCCATGAGTGGTCTTTGAACCAAATCCAAGGCCAGAAGATGATGCTC
 
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JMFS069F03+           CAGCCCCCAGAACAGGCCGCCTATCATCATCATCCTCTTCCATCTCTTTCAAATCCTCCT
JMSF044E12+           CAGCCCCCAGAACAGGCGGCCTATCATCATCATCCTCTTCCATCTCTTTCAAATCCTCCT
                      ____________________________________________________________
consensus             CAGCCCCCAGAACAGGCGGCCTATCATCATCATCCTCTTCCATCTCTTTCAAATCCTCCT
 
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JMFS069F03+           TAAGATCACTATCAACTTCCTGGTTGGGCATTACACTCCCAGTGGAGACAAAGTTAACCG
JMSF044E12+           TAAGATCACTATCAATTTCCTGGTTGGGCATTACACTCCCGGTGGAGACAAAGTGAACAG
                      ____________________________________________________________
consensus             TAAGATCACTATCAATTTCCTGGTTGGGCATTACACTCCCGGTGGAGACAAAGTTAACCG
 
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JMFS069F03+           GCTTGGTAAGGTCTTGCTTCTTAGAAAGGTTCTTCTTCCGCTTTTTGGAGGAACCTAACC
JMSF044E12+           GCTTGGTAAGGTCTGGCTTCTTAGAAAGGTCTTTCTTCCGCTTTCTGGAGGAAACTAACC
                      ____________________________________________________________
consensus             GCTTGGTAAGGTCTTGCTTCTTAGAAAGGTTTTTCTTCCGCTTTTTGGAGGAACCTAACC
 
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JMFF047C06+                                            AAGCAAAAACTCCATAGAGAACATCTT
JMFS069F03+           CCATTCCGTCATAGTCTGAATCACTGTCCCCAGAAGCAAAAACTCCATAGAGAACATCTT
JMSF044E12+           CCTTTCCCTCATAGTCCGAGTCACTGTCCCCAGAAGCAAAAATGCCATAGAGAACATCGT
                      ____________________________________________________________
consensus             CCTTTCCGTCATAGTCTGAGTCACTGTCCCCAGAAGCAAAAACTCCATAGAGAACATCTT
 
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JMFF047C06+           CTNTGGTCTGCACCCGCTTCTCCTTGCGTNTACGGTAGTAAAACTCACCACCAATCCACT
JMFS069F03+           CTTTGGTCTGCACCCGCTTCTCCTTGCGTTTACGGTAGTAAAACTCACCACCAATCCACT
JMSF044E12+           CTTTGGTCTGCGTCCGCTTCTCCTTGCGGTTACGGTAGTAAAACTCACCACCAATCCACT
                      ____________________________________________________________
consensus             CTTTGGTCTGCACCCGCTTCTCCTTGCGTTTACGGTAGTAAAACTCACCACCAATCCACT
 
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JMFF047C06+           GACCATCATCAAAATCATTATCCATCCCAAACCTTTCCATCTCCTGGTCCTCGTCCATTC
JMFS069F03+           GACCATCATCAAAATCATTATCCATCCCAAACCTTTCCATCTCCTGGTCCTCGTCCATTC
JMSF044E12+           GACCGTCATCAAAATCATTCTCCATCCCAAATCTTTCCATCTCCTGGTCCTCATCCATCT
                      ____________________________________________________________
consensus             GACCATCATCAAAATCATTATCCATCCCAAACCTTTCCATCTCCTGGTCCTCGTCCATTC
 
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JMFF047C06+           TCGCACCCTCCTTATAAACT                                        
JMFS069F03+           TCGCACCCTCCTTATAAACT                                        
JMSF044E12+           TCACACCCTCCTTATAAACTTGAGGGAGTGGAGTTGCAGTCGCTGAGTCCCGTACGGTCG
                      ____________________________________________________________
consensus             TCGCACCCTCCTTATAAACTTGAGGGAGTGGAGTTGCAGTCGCTGAGTCCCGTACGGTCG
 
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JMSF044E12+           CCGGTGAGTCGCTGACCGTCTGAGGATGTGAGGAGCGACCGAGCGAGGGCGAAGGGCGTG
                      ____________________________________________________________
consensus             CCGGTGAGTCGCTGACCGTCTGAGGATGTGAGGAGCGACCGAGCGAGGGCGAAGGGCGTG
 
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JMSF044E12+           AGGGAGTGAGGCGGTGAGAGACGAATGACGAGGGCGAACTGCCGGACTGCGGAGGGAGAG
                      ____________________________________________________________
consensus             AGGGAGTGAGGCGGTGAGAGACGAATGACGAGGGCGAACTGCCGGACTGCGGAGGGAGAG
 
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JMSF044E12+           ACAGAGAGTGGTCGTCTTGGTCACTGGTCGAGAGTCGAGACAGTCAGAAAGAGAGATTTC
                      ____________________________________________________________
consensus             ACAGAGAGTGGTCGTCTTGGTCACTGGTCGAGAGTCGAGACAGTCAGAAAGAGAGATTTC