Contig 002417:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF031E21+                                                             CGAGAAGTGC
JMSF043O24+                                                 CTCCGATAGCTCCGAGAAGTGC
                      ____________________________________________________________
consensus                                                   CTCCGATAGCTCCGAGAAGTGC
 
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JMSF031E21+           GAGCAACCTTTGGGAGCCGAGTCGGTGCAGAAAACCTTGATTTCATTCTCCCATGCATAT
JMSF043O24+           GAGCAACCTTTGGGAGCCGAGTCGGTGCAGAAAACCTTGATTTCATTCTCCCATGCATAT
                      ____________________________________________________________
consensus             GAGCAACCTTTGGGAGCCGAGTCGGTGCAGAAAACCTTGATTTCATTCTCCCATGCATAT
 
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JMSF031E21+           TCTCTGACCTTGTCCACGTAACAAGCTAGAGTCACGATGAGCTTTGCATTGGACGCCTTG
JMSF043O24+           TCTCTGACCTTGTCCACGTAACAAGCTAGAGTCACGATGAGCTTTGCATTGGACGCCTTG
                      ____________________________________________________________
consensus             TCTCTGACCTTGTCCACGTAACAAGCTAGAGTCACGATGAGCTTTGCATTGGACGCCTTG
 
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JMSF031E21+           ACCTGCTTAATCACCTCCGCCGGCGTGAACAGAGGATTCGCCATCGTCGCCACAGCGCCG
JMSF043O24+           ACCTGCTTAATCACCTCCGCCGGCGTGAACAGAGGATTCGCCATCGTCGCCACAGCGCCG
                      ____________________________________________________________
consensus             ACCTGCTTAATCACCTCCGCCGGCGTGAACAGAGGATTCGCCATCGTCGCCACAGCGCCG
 
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JMSF031E21+           CGGTAAGACGCGCCGAGGAACGCGAACACAAACTCCGGACAGTTGGGAAGCAGGATCATG
JMSF043O24+           CGGTAAGACGCGCCGAGGAACGCGAACACAAACTCCGGACAGTTGGGAAGCAGGATCATG
                      ____________________________________________________________
consensus             CGGTAAGACGCGCCGAGGAACGCGAACACAAACTCCGGACAGTTGGGAAGCAGGATCATG
 
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JMSF031E21+           ATGGTGTCGCCGTGGTTGATCCCTGCTTTATGAAGCCCGGCCGCAACTTTCCGGCAACTG
JMSF043O24+           ATGGTGTCGCCGTGGTTGATCCCTGCTTTATGAAGCCCGGCCGCAACTTTCCGGCAACTG
                      ____________________________________________________________
consensus             ATGGTGTCGCCGTGGTTGATCCCTGCTTTATGAAGCCCGGCCGCAACTTTCCGGCAACTG
 
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JMSF031E21+           AGTTCCACTTCAGCGTAAGTATATACCCGATCATCGGAGCCGTTGATGAGGCAGGGGCGG
JMSF043O24+           AGTTCCACTTCAGCGTAAGTATATACCCGATCATCGGAGCCGTTGATGAGGCAGGGGCGG
                      ____________________________________________________________
consensus             AGTTCCACTTCAGCGTAAGTATATACCCGATCATCGGAGCCGTTGATGAGGCAGGGGCGG
 
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JMSF031E21+           TCCCGTAAGACGGAAATGTTCTGGAAGCAATAGGAATGGAGAGGGAGGTGGTTGGAGATG
JMSF043O24+           TCCCGTAAGACGGAAATGTTCTGGAAGCAATAGGAATGGAGAGGGAGGTGGTTGGAGATG
                      ____________________________________________________________
consensus             TCCCGTAAGACGGAAATGTTCTGGAAGCAATAGGAATGGAGAGGGAGGTGGTTGGAGATG
 
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JMSF031E21+           TAAATATCGGGGAGTTTTGATCGGAAAATGATGTCACCACCGCCCTGCTCTGTTTTGGTT
JMSF043O24+           TAAATATCGGGGAGTTTTGATCGGAAAATGATGTCACCACCGCCCTGCTCTGTTTTGGTT
                      ____________________________________________________________
consensus             TAAATATCGGGGAGTTTTGATCGGAAAATGATGTCACCACCGCCCTGCTCTGTTTTGGTT
 
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JMSF031E21+           GCCATCTTCAATGGAGTTGGTGGGAGAGGGAAGAAATGGACACACCAAATAAAAATTT-A
JMSF043O24+           GCCATCTTCAATGGAGTTGGTGGGAGAGGGAAGAAATGGACACACCAAATAAAAATTTAA
                      ____________________________________________________________
consensus             GCCATCTTCAATGGAGTTGGTGGGAGAGGGAAGAAATGGACACACCAAATAAAAATTTAA
 
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JMSF031E21+           AAAAAAATTAAAAAGGAGAGGGTAGGCTACTTTTTTAGGTTTTGGTTAAGTGT       
JMSF043O24+           AAAAAAATTAAAAAGGAGAGGGTAGGCTACTTTTTTAGGTTTTGGTTAAGTGTGTCCTGC
                      ____________________________________________________________
consensus             AAAAAAATTAAAAAGGAGAGGGTAGGCTACTTTTTTAGGTTTTGGTTAAGTGTGTCCTGC