clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF007A11 | Sequence | 581 | 002415 (13) | emb|CDP03161.1| | 4e-78 | unnamed protein product [Coffea canephora] | 785 | 005500 (15) | gb|ABB54381.2| | 5e-121 | FVE [Ipomoea nil] |
JMFF016M02 | Sequence | 623 | 002415 (13) | emb|CDP03161.1| | 2e-87 | unnamed protein product [Coffea canephora] | 798 | 005500 (15) | gb|ABB54381.2| | 9e-109 | FVE [Ipomoea nil] |
JMFF024C16 | Sequence | 516 | 002415 (13) | emb|CDP03161.1| | 2e-56 | unnamed protein product [Coffea canephora] | 775 | 005500 (15) | gb|ABB54381.2| | 4e-130 | FVE [Ipomoea nil] |
JMFF027E02 | Sequence | 611 | 002415 (13) | emb|CDP03161.1| | 9e-87 | unnamed protein product [Coffea canephora] | 749 | 005500 (15) | gb|ABB54381.2| | 1e-113 | FVE [Ipomoea nil] |
JMFF041N20 | Sequence | 658 | 002415 (13) | emb|CDP03161.1| | 1e-89 | unnamed protein product [Coffea canephora] | 594 | 005500 (15) | gb|ABB54381.2| | 1e-75 | FVE [Ipomoea nil] |
JMFF042N08 | Sequence | 634 | 002415 (13) | emb|CDP03161.1| | 1e-73 | unnamed protein product [Coffea canephora] | 582 | 005500 (15) | gb|ABB54381.2| | 1e-47 | FVE [Ipomoea nil] |
JMFF042N14 | Sequence | 635 | 002415 (13) | emb|CDP03161.1| | 2e-79 | unnamed protein product [Coffea canephora] | 466 | 005500 (15) | gb|ABB54381.2| | 3e-19 | FVE [Ipomoea nil] |
JMFF049C24 | Sequence | 641 | 002415 (13) | emb|CDP03161.1| | 3e-66 | unnamed protein product [Coffea canephora] | 457 | 005500 (15) | gb|ABB54381.2| | 1e-31 | FVE [Ipomoea nil] |
JMFS028A04 | Sequence | 644 | 002415 (13) | emb|CDP03161.1| | 4e-96 | unnamed protein product [Coffea canephora] | |||||
JMSF034M20 | Sequence | 683 | 002415 (13) | emb|CDP03161.1| | 3e-104 | unnamed protein product [Coffea canephora] | |||||
JMSF035G13 | Sequence | 707 | 002415 (13) | emb|CDP03161.1| | 5e-110 | unnamed protein product [Coffea canephora] | 779 | 005500 (15) | gb|ABB54381.2| | 2e-132 | FVE [Ipomoea nil] |
JMSF040K15 | Sequence | 617 | 002415 (13) | emb|CDP03161.1| | 3e-65 | unnamed protein product [Coffea canephora] | 860 | 005500 (15) | gb|ABB54381.2| | 8e-117 | FVE [Ipomoea nil] |
JMSF043M18 | Sequence | 749 | 002415 (13) | emb|CDP03161.1| | 3e-95 | unnamed protein product [Coffea canephora] | 741 | 005500 (15) | gb|ABB54381.2| | 2e-115 | FVE [Ipomoea nil] |
This contig is upended
. : . : . : . : . : . :
JMSF034M20+ TGGGG
JMSF035G13+ CCAGAGAGCACAAAGGGTTCAGTGGGG
____________________________________________________________
consensus CCAGAGAGCACAAAGGGTTCAGTGGGG
. : . : . : . : . : . :
JMSF034M20+ CACGTTGCCAATGCAAATTCTGCATTCTCACTATGTCCAATCAATGTCAAATCTGGGCGT
JMSF035G13+ CACATTGCCAATGCAAATTCTGCATTCTCACTATGTCCAATCAATGTCAAATCTGGGCGT
JMFS028A04+ ATGTCCAATCAATGTCAAATCTGGGCGT
JMFF041N20+ CGT
JMSF043M18+ ATGTCCAATCAATGTCAAATCTGGGCGT
____________________________________________________________
consensus CACGTTGCCAATGCAAATTCTGCATTCTCACTATGTCCAATCAATGTCAAATCTGGGCGT
. : . : . : . : . : . :
JMSF034M20+ GAAGCAACAGCTCCAAGAACAGCATGTCGATTAGGTTGGGCTTCCACATCCCAAATTAGA
JMSF035G13+ GAAGCAACAGCTCCAAGAACAGCATGTCGATTAGGTTGGGCTTCCACATCCCAAATTAGA
JMFS028A04+ GAAGCAACAGCTCCAAGAACAGCATGTCGATTAGGTTGGGCTTCCACATCCCAAATTAGA
JMFF041N20+ GAAGCAACAGCTCCAAGAACAGCATGTCGATTAGGTTGGGCTTCCACATCCCAAATTAGA
JMFF042N14+ CATCCCAAATTAGA
JMFF016M02+ AACAGCATGTCGATTAGGTTGGGCTTCCACATCCCAAATTAGA
JMFF027E02+ CAGCATGTCGATTAGGTTGGGCTTCCACATCCCAAATTAGA
JMFF007A11+ CCCAAATTAGA
JMSF043M18+ GAAGCAACAGCTCCAAGAACAGCATGTCGATTAGGTTGGGCTTCCACATCCCAAATTAGA
____________________________________________________________
consensus GAAGCAACAGCTCCAAGAACAGCATGTCGATTAGGTTGGGCTTCCACATCCCAAATTAGA
. : . : . : . : . : . :
JMSF034M20+ ACTTCAGGACTATCAGTATGGGTTGCCACTATGTTTTTATTTTGAGGAAGCTCTCTGATT
JMSF035G13+ ACTTCAGGACTATCAGTATGGGTTGCCACTATGTTTTTATTTTGAGGAAGCTCTCTGATT
JMFS028A04+ ACTTCAGGACTATCAGTATGGGTTGCCACTATGTTTTTATTTTGAGGAAGCTCTCTGATT
JMFF041N20+ ACTTCAGGACTATCAGTATGGGTTGCCACTATGTTTTTATTTTGAGGAAGCTCTCTGATT
JMFF042N14+ ACTTCAGGACTATCAGTATGGGTTGCCACTATGTTTTTATTTTGAGGAAGCTCTCTGATT
JMFF016M02+ ACTTCAGGACTATCAGTATGGGTTGCCACTATGTTTTTATTTTGAGGAAGCTCTCTGATT
JMFF049C24+ CTATCAGTATGGGTTGCCACTATGTTTTTATTT-GAGGAAGCTCTCTGATT
JMSF040K15+ GAGGAAGCTCTCTGATT
JMFF042N08+ CTTCAGGACTATCAGTATGGGTTGCCACTATGTTTTTATTTGAGGANAGCTCTCTGATT
JMFF027E02+ ACTTCAGGACTATCAGTATGGGTTGCCACTATGTTTTTATTTTGAGGAAGCTCTCTGATT
JMFF007A11+ ACTTCAGGACTATCAGTATGGGTTGCCACTATGTTTTTATTTTGAGGAAGCTCTNTGATT
JMSF043M18+ ACTTCAGGACTATCAGTATGGGTTGCCACTATGTTTTTATTTTGAGGAAGCTCTCTGATT
____________________________________________________________
consensus ACTTCAGGACTATCAGTATGGGTTGCCACTATGTTTTTATTTTGAGGAAGCTCTCTGATT
. : . : . : . : . : . :
JMSF034M20+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMSF035G13+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMFS028A04+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMFF041N20+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMFF042N14+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMFF016M02+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMFF049C24+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMSF040K15+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMFF042N08+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMFF027E02+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMFF007A11+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMFF024C16+ TATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
JMSF043M18+ CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
____________________________________________________________
consensus CTGTTAACCTCCCCTGGGTGTATAATGGTTTTGTACTTCTTGACATAAGGTGAGCGTGAT
. : . : . : . : . : . :
JMSF034M20+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMSF035G13+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMFS028A04+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMFF041N20+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMFF042N14+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMFF016M02+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMFF049C24+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMSF040K15+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMFF042N08+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMFF027E02+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMFF007A11+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMFF024C16+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
JMSF043M18+ TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
____________________________________________________________
consensus TCTTCATTGAAGTGTGATATGTGACTGTCTGCTGCAATCCTGGGTCGAACCACATCACAG
. : . : . : . : . : . :
JMSF034M20+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMSF035G13+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMFS028A04+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMFF041N20+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMFF042N14+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMFF016M02+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMFF049C24+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMSF040K15+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMFF042N08+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMFF027E02+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMFF007A11+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMFF024C16+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
JMSF043M18+ TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
____________________________________________________________
consensus TTGGCTACAATCAAAGTGTTTGGCACTGATTGATCTGTCTGTTCTGAAAGATAAAGTCGT
. : . : . : . : . : . :
JMSF034M20+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMSF035G13+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMFS028A04+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMFF041N20+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMFF042N14+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMFF016M02+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMFF049C24+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMSF040K15+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMFF042N08+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMFF027E02+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMFF007A11+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMFF024C16+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
JMSF043M18+ TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
____________________________________________________________
consensus TGGCGGTTTTTGTGACTGTGCTGCTCAACCACAGGACCCCATCGGCAGGACAGTGACGGC
. : . : . : . : . : . :
JMSF034M20+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMSF035G13+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMFS028A04+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMFF041N20+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMFF042N14+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMFF016M02+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMFF049C24+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMSF040K15+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMFF042N08+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMFF027E02+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMFF007A11+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMFF024C16+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
JMSF043M18+ CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
____________________________________________________________
consensus CATACGAGGTTATGATTAGCAAACCAGTCATAGAGGACGGGAACGAGCGACTTCCACTGC
. : . : . : . : . : . :
JMSF034M20+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMSF035G13+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMFS028A04+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMFF041N20+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMFF042N14+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMFF016M02+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMFF049C24+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMSF040K15+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMFF042N08+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMFF027E02+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMFF007A11+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMFF024C16+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
JMSF043M18+ GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
____________________________________________________________
consensus GCGTACTTCTCGTCAGCTGCGGCAGCGGCGGCCTTCTTGTCAGCTCCAGGTCCTCTCATC
. : . : . : . : . : . :
JMSF034M20+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
JMSF035G13+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
JMFS028A04+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
JMFF041N20+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTCGACTTG
JMFF042N14+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
JMFF016M02+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
JMFF049C24+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
JMSF040K15+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
JMFF042N08+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
JMFF027E02+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
JMFF007A11+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
JMFF024C16+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTCGACTTG
JMSF043M18+ CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
____________________________________________________________
consensus CTGGGGGTGGCGCCGGCAGCGGAGTGCGGCTGCTCGCGATCTCTGTCCTCCTTGGACTTG
. : . : . : . : . : . :
JMSF034M20+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMSF035G13+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMFS028A04+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMFF041N20+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMFF042N14+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMFF016M02+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMFF049C24+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMSF040K15+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMFF042N08+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMFF027E02+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMFF007A11+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMFF024C16+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
JMSF043M18+ GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
____________________________________________________________
consensus GCAGAAGAGCCCTTGGGACGGCCGCGCCTCCTCGGCTGCTGCTGAGGAGTTTCCATGGCG
. : . : . : . : . : . :
JMSF034M20+ GAGTGAGCTAGCT
JMSF035G13+ GAGTGAGCTAGCTGGACCT
JMFS028A04+ GAGTGAGCTAGCTGGA
JMFF041N20+ GAGTGAGCTAGCTGGACCTGACCTACTTGGAAATGG
JMFF042N14+ GAGTGAGCTAGCTGGACCTGACCTACTTGGAAATGGTGACAGTAGAAGGAAGCAGCAAAA
JMFF016M02+ GAGTGAGCTAGCTGGACCTGACCTACTTGGAAATGGTGAC
JMFF049C24+ GAGTGAGCTAGCTGGACCTGACCTACTTGGAAATGGTGACAGTAGAAGGAAGCAGCAAAA
JMSF040K15+ GAGTGAGCTAGCTGGACCTGACCTACTTGGAAATGGTGACAGTAGAAGGAAGCAGCAAAA
JMFF042N08+ GAGTGAGCTAGCTGGACCTGACCTACTTGGAAATGGTGACAGTAGAAGGAAGCAGCAAAA
JMFF027E02+ GAGTGAGCTAGCTGGACCTGACCT
JMFF007A11+ GAGTGAGCTAGCTGGACCTGACCT
JMFF024C16+ GAGTGAGCTAGCTGGACCTGACCTACTTGGAAATGGTGACAGTAGAAGGAAGCAGC
JMSF043M18+ GAGTGAGCTAGCTGGACCTGACCTACTTGGAAATGGTGACAGTAGAAGGAAGCAGCAAAA
____________________________________________________________
consensus GAGTGAGCTAGCTGGACCTGACCTACTTGGAAATGGTGACAGTAGAAGGAAGCAGCAAAA
. : . : . : . : . : . :
JMFF042N14+ CAGCGGGGGTTTAGATGAAAT
JMFF049C24+ CAGCGGGGGTTTAGATGAAATGACTAGAATAGACTGGGAAGCGACAATGCG
JMSF040K15+ CAGCGGGGGTTTAGATGAAATGACTAGAATAGACTGGGAAGCGACAATGCGAAAGACACC
JMFF042N08+ CAGCGGGGGTTTAGATGAAATGACTAGAATAGACT
JMSF043M18+ CAGCGGGGGTTTAGATGAAATGACTAGAATAGACTGGGAAGCGACAATGCGAAAGACACC
____________________________________________________________
consensus CAGCGGGGGTTTAGATGAAATGACTAGAATAGACTGGGAAGCGACAATGCGAAAGACACC