Contig 002411:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF043D20-                                       GGATGCGAAAGGTGAAGCAAATTAGCAAACCC
                      ____________________________________________________________
consensus                                         GGATGCGAAAGGTGAAGCAAATTAGCAAACCC
 
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rJMSF043D20+                                           TCTCGCCGCCTTGTCCGACAAACAATC
JMSF043D20-           CCAGTCTCCCATAGTTCGATTATCCTCTTCGTTTCTCGCCGCCTTGTCCGACAAACAATC
                      ____________________________________________________________
consensus             CCAGTCTCCCATAGTTCGATTATCCTCTTCGTTTCTCGCCGCCTTGTCCGACAAACAATC
 
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rJMSF043D20+          TCCGGCATACAACTTCACCGTGAATAACATCCTATTAGATTCATTCTAGCTACTAGCTAC
JMSF043D20-           TCCGGCATACAACTTCACCGTGAATAACATCCTATTAGATTCATTCTAGCTACTAGCTAC
                      ____________________________________________________________
consensus             TCCGGCATACAACTTCACCGTGAATAACATCCTATTAGATTCATTCTAGCTACTAGCTAC
 
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rJMSF043D20+          TCTACCAGGTGTTTACTTGATAGGTTATTGGATAATGGAACCGGGGAGAGATAGAATCAG
JMSF043D20-           TCTACCAGGTGTTTACTTGATAGGTTATTGGATAATGGAACCGGGGAGAGATAGAATCAG
                      ____________________________________________________________
consensus             TCTACCAGGTGTTTACTTGATAGGTTATTGGATAATGGAACCGGGGAGAGATAGAATCAG
 
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rJMSF043D20+          TCAACTTCCTGTAGAAATACTTGATCACATCTTGGAATTTTTGCCTATTAAAGATGCTGC
JMSF043D20-           TCAACTTCCTGTAGAAATACTTGATCACATCTTGGAATTTTTGCCTATTAAAGATGCTGC
                      ____________________________________________________________
consensus             TCAACTTCCTGTAGAAATACTTGATCACATCTTGGAATTTTTGCCTATTAAAGATGCTGC
 
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rJMSF043D20+          TAAAACCGCTGTTCTGTCTTCCGTTTGGAGAGATGTTTGGTCCAATCTCACACAACTTAA
JMSF043D20-           TAAAACCGCTGTTCTGTCTTCCGTTTGGAGAGATGTTTGGTCCAATCTCACACAACTTAA
                      ____________________________________________________________
consensus             TAAAACCGCTGTTCTGTCTTCCGTTTGGAGAGATGTTTGGTCCAATCTCACACAACTTAA
 
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rJMSF043D20+          CTTTGATCATCACTTCTTTTCTTATATGGATGAGAAACATTATCGTGCTAGCAATTATGT
JMSF043D20-           CTTTGATCATCACTTCTTTTCTTATATGGATGAGAAACATTATCGTGCTAGCAATTATGT
                      ____________________________________________________________
consensus             CTTTGATCATCACTTCTTTTCTTATATGGATGAGAAACATTATCGTGCTAGCAATTATGT
 
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rJMSF043D20+          CACAGAATCTGCCGCGGGTTTTTATGTGATCAACAAAGTTCTCCCCCAGCACAATGGAGC
JMSF043D20-           CACAGAATCTGCCGCGGGTTTTTATGTGATCAACAAAGTTCTCCCCCAGCACAATGGAGC
                      ____________________________________________________________
consensus             CACAGAATCTGCCGCGGGTTTTTATGTGATCAACAAAGTTCTCCCCCAGCACAATGGAGC
 
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rJMSF043D20+          AATTCAGAAATTTGTTCTCAAAATTCTTGATGTTGGGATATTCATAGTTAAGTCTTGGTC
JMSF043D20-           AATTCAGAAATTTGTTCTCAAAATTCTTGATGTTGGGATATTCATAGTTAAGTCTTGGTC
                      ____________________________________________________________
consensus             AATTCAGAAATTTGTTCTCAAAATTCTTGATGTTGGGATATTCATAGTTAAGTCTTGGTC
 
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rJMSF043D20+          TTATGACTTCGACCAATGGTTACTTTTAGTTACACGGAAAGGTGTTGAGGAAATGAAGAT
JMSF043D20-           TTATGACTTCGACCAATGGTTACTTTTAGTTACACGGAAAGGTGTTGAGGAAATGAAGAT
                      ____________________________________________________________
consensus             TTATGACTTCGACCAATGGTTACTTTTAGTTACACGGAAAGGTGTTGAGGAAATGAAGAT
 
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rJMSF043D20+          TAGTCTTGGGTATAATATATACAAGCTGCCGAATTATATATTTTCTTGTTCAACACTCAA
JMSF043D20-           TAGTCTTGGGTATAATATATACAAGCTGCCGAATTATATATTTTCTTGTTCAACACTCAA
                      ____________________________________________________________
consensus             TAGTCTTGGGTATAATATATACAAGCTGCCGAATTATATATTTTCTTGTTCAACACTCAA
 
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rJMSF043D20+          GAGGTTGCATCTTGCTTATGTCCTTGCATCTTGCTTATGTCGTTGTTCAACCAATGAATT
JMSF043D20-           GAGGTTGCATCTTGCTTATGTCCTTGCATCTTGCTTATGTCGTTGTTCAACCAATGAATT
                      ____________________________________________________________
consensus             GAGGTTGCATCTTGCTTATGTCCTTGCATCTTGCTTATGTCGTTGTTCAACCAATGAATT
 
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rJMSF043D20+          CTCCCAACATACTACCAAATGTTACTTTGCTTAGTTTTGATCATGTTAAATTTGATCCTA
JMSF043D20-           CTCCCAACATACTACCAAATGTTACTTTGCTTAGTTTTGATCATGTTAAATTTGATCCTA
                      ____________________________________________________________
consensus             CTCCCAACATACTACCAAATGTTACTTTGCTTAGTTTTGATCATGTTAAATTTGATCCTA
 
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rJMSF043D20+          TAAACCCTTCACCTTGTGCCATTGATGTTCCTGTACTTGAGAGTCTGTTAATTTGTTGGT
JMSF043D20-           TAAACCCTTCACCTTGTGCCATTGATGTTCCTGTACTTGAGAGTCTGTTAATTTGTTGGT
                      ____________________________________________________________
consensus             TAAACCCTTCACCTTGTGCCATTGATGTTCCTGTACTTGAGAGTCTGTTAATTTGTTGGT
 
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rJMSF043D20+          GTGAAAACACT                                                 
JMSF043D20-           GTGAAAACACTTTTAATTTTAACATGACTGCTCCAAGCTATGTGATTTAACAAAAAAAAA
                      ____________________________________________________________
consensus             GTGAAAACACTTTTAATTTTAACATGACTGCTCCAAGCTATGTGATTTAACAAAAAAAAA