| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027E22 | Sequence | 556 | 002406 (6) | emb|CDP21255.1| | 3e-70 | unnamed protein product [Coffea canephora] | 712 | 002406 (6) | ref|XP_009598592.1| | 6e-123 | PREDICTED: protein EXORDIUM-like [Nicotiana tomentosiformis] |
| JMFF049O12 | Sequence | 384 | 002406 (6) | emb|CDP21255.1| | 3e-38 | unnamed protein product [Coffea canephora] | |||||
| JMFN036N21 | Sequence | 614 | 002406 (6) | ref|XP_009598592.1| | 2e-85 | PREDICTED: protein EXORDIUM-like [Nicotiana tomentosiformis] | |||||
| JMSF042M03 | Sequence | 785 | 002406 (6) | ref|XP_009598592.1| | 1e-121 | PREDICTED: protein EXORDIUM-like [Nicotiana tomentosiformis] | 690 | 002406 (6) | ref|XP_009598592.1| | 1e-121 | PREDICTED: protein EXORDIUM-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF042M03- AAGAATGAATGAATCAAAGAATATGTAA
rJMFF027E22- TAAATTCTGAATTTCTAAATAAGAATGAATGAATCAAAGAATATGTAA
____________________________________________________________
consensus TAAATTCTGAATTTCTAAATAAGAATGAATGAATCAAAGAATATGTAA
. : . : . : . : . : . :
rJMSF042M03- AGATGACAATATCCTATGTGTTTGTGTGTGTGTGTTTGCGCGGTAAACAAACACGACATT
rJMFF027E22- AGATGACAATATCCTATGTGTTTGTGTGTGTGTGTTTGCGCGGTAAACAAACACGACATT
____________________________________________________________
consensus AGATGACAATATCCTATGTGTTTGTGTGTGTGTGTTTGCGCGGTAAACAAACACGACATT
. : . : . : . : . : . :
rJMSF042M03- AGACCAGCGTAGAACAGGACGAGGTTGAAGGATCAAACAGGGCTGGGAGCAAGTACTTCC
rJMFF027E22- AGACCAGCGTAGAACAGGACGAGGTTGAAGGATCAAACAGGGCTGGGAGCAAGTACTTCC
____________________________________________________________
consensus AGACCAGCGTAGAACAGGACGAGGTTGAAGGATCAAACAGGGCTGGGAGCAAGTACTTCC
. : . : . : . : . : . :
rJMSF042M03- TCCCATTTGCGCCATGCGCATTATAGCTAGCACCACTAGTAGGGTCCACCAACAGATTGC
rJMFF027E22- TCCCATTTGCGCCATGCGCATTATAGCTAGCACCACTAGTAGGGTCCACCAACAGATTGC
____________________________________________________________
consensus TCCCATTTGCGCCATGCGCATTATAGCTAGCACCACTAGTAGGGTCCACCAACAGATTGC
. : . : . : . : . : . :
rJMSF042M03- CAGCATATCCAGGGAAGGCCCCACTTCCGTAAACCCCGGTGCAAGCCGAAGCAGCCTCCA
rJMFF027E22- CAGCATATCCAGGGAAGGCCCCACTTCCGTAAACCCCGGTGCAAGCCGAAGCAGCCTCCA
____________________________________________________________
consensus CAGCATATCCAGGGAAGGCCCCACTTCCGTAAACCCCGGTGCAAGCCGAAGCAGCCTCCA
. : . : . : . : . : . :
rJMSF042M03- ACGGCGCGTCCGCCGGGCCCTGGTAGAACCCGTTTCCAAATGGGTTCGTCACGGTCCCAG
rJMFF027E22- ACGGCGCGTCCGCCGGGCCCTGGTAGAACCCGTTTCCAAATGGGTTCGTCACGGTCCCAG
JMSF042M03+ CCCAG
____________________________________________________________
consensus ACGGCGCGTCCGCCGGGCCCTGGTAGAACCCGTTTCCAAATGGGTTCGTCACGGTCCCAG
. : . : . : . : . : . :
rJMSF042M03- CCATGAGGCTCGCTAAGTTAATAACCATACCGTCCAGGCCCACATCGTTATTGGGCGCCA
rJMFF027E22- CCATGAGGCTCGCTAAGTTAATAACCATACCGTCCAGGCCCACATCGTTATTGGGCGCCA
JMSF042M03+ CCATGAGGCTCGCTAAGTTAATAACCATACCGTCCAGGCCCACATCGTTATTGGGCGCCA
____________________________________________________________
consensus CCATGAGGCTCGCTAAGTTAATAACCATACCGTCCAGGCCCACATCGTTATTGGGCGCCA
. : . : . : . : . : . :
rJMSF042M03- CCAAGGGCTGGGCCTGCGGGCCATAAATGGGCTGGTGGAAGGGCCACGCGCATTTTCCCG
rJMFF027E22- CCAAGGGCTGGGCCTGCGGGCCATAAATGGGCTGGTGGAAGGGCCACGCGCATTTTCCCG
JMSF042M03+ CCAAGGGCTGGGCCTGCGGGCCATAAATGGGCTGGTGGAAGGGCCACGCGCATTTTCCCG
____________________________________________________________
consensus CCAAGGGCTGGGCCTGCGGGCCATAAATGGGCTGGTGGAAGGGCCACGCGCATTTTCCCG
. : . : . : . : . : . :
rJMSF042M03- GGCACGCGGTCTCCGAGTTGCCAACCCAGATGTAGGCAAATTTGTAATTCTTTCCCTTTG
rJMFF027E22- GGCACGCGGTCTCCGAGTTGCCAACCCAGATGTAGGCAAATTTGTAATTCTTTCCCTTTG
JMFN036N21+ GATGTAGGCAAATTTGTAATTCTTTCCCTTTG
JMSF042M03+ GGCACGCGGTCTCCGAGTTGCCAACCCAGATGTAGGCAAATTTGTAATTCTTTCCCTTTG
____________________________________________________________
consensus GGCACGCGGTCTCCGAGTTGCCAACCCAGATGTAGGCAAATTTGTAATTCTTTCCCTTTG
. : . : . : . : . : . :
rJMSF042M03- CAGGGGTAATCTTGGAACTCAACGCAGAGCCGTGGGTCCCGCATCTGGTAGTGCAAAATC
rJMFF027E22- CAGGGGTAATCTTGGAACTCAACGCAGAGCCGTGGGTCCCGCATCTGGTAGTGCAAAATC
JMFN036N21+ CAGGGGTAATCTTGGAACTCAACGCAGAGCCGTGGGTCCCGCATCTGGTAGTGCAAAATC
JMFF027E22+ TCTGGTAGTGCAAAATC
JMSF042M03+ CAGGGGTAATCTTGGAACTCAACGCAGAGCCGTGGGTCCCGCATCTGGTAGTGCAAAATC
____________________________________________________________
consensus CAGGGGTAATCTTGGAACTCAACGCAGAGCCGTGGGTCCCGCATCTGGTAGTGCAAAATC
. : . : . : . : . : . :
rJMSF042M03- TTTCGACGACAACATCGGAAGCCGTGAGTACAACGTTAATGGCGTTTTGCTGATCGCCCT
rJMFF027E22- TTTCGACGACAACATCGGAAGCCGTGAGTACAACGTTAATGGCGTTTTGCTGATCGCCCT
JMFN036N21+ TTTCGACGACAACATCGGAAGCCGTGAGTACAACGTTAATGGCGTTTTGCTGATCGCCCT
JMFF027E22+ TTTCGACGACAACATCGGAAGCCGTGAGTACAACGTTAATGGCGTTTTGCTGATCGCCCT
JMSF042M03+ TTTCGACGACAACATCGGAAGCCGTGAGTACAACGTTAATGGCGTTTTGCTGATCGCCCT
____________________________________________________________
consensus TTTCGACGACAACATCGGAAGCCGTGAGTACAACGTTAATGGCGTTTTGCTGATCGCCCT
. : . : . : . : . : . :
rJMSF042M03- TGGCTGCCAGCTCTTGAATCTGGTGATCTTTCAGTGATTTTCCCANAGAATATTTCTCGT
rJMFF027E22- TGGCTGCCAGCTCTTGAATCTGGTGATCTTTCAGTGATTTTCCCAGAGAATATTTCTCGT
JMFN036N21+ TGGCTGCCAGCTCTTGAATCTGGTGATCTTTCAGTGATTTTCCCAGAGAATATTTCTCGT
JMFF027E22+ TGGCTGCCAGCTCTTGAATCTGGTGATCTTTCAGTGATTTTCCCAGAGAATATTTCTCGT
JMSF042M03+ TGGCTGCCAGCTCTTGAATCTGGTGATCTTTCAGTGATTTTCCCAGAGAATATTTCTCGT
____________________________________________________________
consensus TGGCTGCCAGCTCTTGAATCTGGTGATCTTTCAGTGATTTTCCCAGAGAATATTTCTCGT
. : . : . : . : . : . :
rJMSF042M03- CC
rJMFF027E22- CCAA
JMFN036N21+ CCAAGATCTGAGTACCTAGCGAGAGGACGAGCGGGGAAGCTTTCTTGGACTTGAGCGCGC
JMFF027E22+ CCAAGATCTGAGTACCTAGCGAGAGGACGAGCGGGGAAGCTTTCTTGGACTTGAGCGCGC
JMFF049O12+ GAAGCTTTCTTGGACTTGAGCGCGC
JMSF042M03+ CCAAGATCTGAGTACCTAGCGAGAGGACGAGCGGGGAAGCTTTCTTGGACTTGAGCGCGC
____________________________________________________________
consensus CCAAGATCTGAGTACCTAGCGAGAGGACGAGCGGGGAAGCTTTCTTGGACTTGAGCGCGC
. : . : . : . : . : . :
JMFN036N21+ CGTAGTATTTCTCGGTGGCCTTCCACCACGTCGCGACGGAGGGTTGACCCGCGGCGGCGG
JMFF027E22+ CGTAGTATTTCTCGGTGGCCTTCCACCACGTCGCGACGGAGGGTTGACCCGCGGCGGCGG
JMFF049O12+ CGTAGTATTTCTCGGTGGCCTTCCACCACGTCGCGACGGAGGGTTGACCCGCGGCGGCGG
JMSF042M03+ CGTAGTATTTCTCGGTGGCCTTCCACCACGTCGCGACGGAGGGTTGACCCGCGGCGGCGG
____________________________________________________________
consensus CGTAGTATTTCTCGGTGGCCTTCCACCACGTCGCGACGGAGGGTTGACCCGCGGCGGCGG
. : . : . : . : . : . :
JMFN036N21+ GCTTAGAGGTGGTGGAAGACAATGAGGTGATGAAATCGGAAACGATGGCGCGTTGGGAAG
JMFF027E22+ GCTTAGAGGTGGTGGAAGACAATGAGGTGATGAAATCGGAAACGATGGCGCGTTGGGAAG
JMFF049O12+ GCTTAGAGGTGGTGGAAGACAATGAGGTGATGAAATCGGAAACGATGGCGCGTTGGGAAG
JMSF042M03+ GCTTAGAGGTGGTGGAAGACAATGAGGTGATGAAATCGGAAACGATGGCGCGTTGGGAAG
____________________________________________________________
consensus GCTTAGAGGTGGTGGAAGACAATGAGGTGATGAAATCGGAAACGATGGCGCGTTGGGAAG
. : . : . : . : . : . :
JMFN036N21+ GCTTGAATTTGCCATACCAAATGAGGTTTACGGTGACCTTCCCGGTGAGAAGAGCGCCGT
JMFF027E22+ GCTTGAATTTGCCATACCAAATGAGGTTTACGGTGACCTTCCCGGTGAGAAGAGCGCCGT
JMFF049O12+ GCTTGAATTTGCCATACCAAATGAGGTTTACGGTGACCTTCCCGGTGAGAAGAGCGCCGT
JMSF042M03+ GCTTGAATTTGCCATACCAAATGAGGTTTACGGTGACCTTCCCGGTGAGAAGAGCGCCGT
____________________________________________________________
consensus GCTTGAATTTGCCATACCAAATGAGGTTTACGGTGACCTTCCCGGTGAGAAGAGCGCCGT
. : . : . : . : . : . :
JMFN036N21+ TGTGATATTGAAAGAGAAAAGACTGGTCCTGGGTTGACTCAGCGAGTTGCCTCGCAGCCA
JMFF027E22+ TGTGATATTGAAAGAGAAAAGACTGGTCCTGGGTTGACTCAGCGAGTTGCCTCGCAGCCA
JMFF049O12+ TGTGATATTGAAAGAGAAAAGACTGGTCCTGGGTTGACTCAGCGAGTTGCCTCGCAGCCA
JMSF042M03+ TGTGATATTGAAAGAGAAAAGACTGGTCCTGGGTTGACTCAGCGAGTTGCCTCGCAGCCA
____________________________________________________________
consensus TGTGATATTGAAAGAGAAAAGACTGGTCCTGGGTTGACTCAGCGAGTTGCCTCGCAGCCA
. : . : . : . : . : . :
JMFN036N21+ AGGAGTATTGAAACAATGAAGCGAAAATGGCTAATTGAACAAAAAGAAAACTGGGCTTAA
JMFF027E22+ AGGAGTATTGAAACAATGAAGCGAAAATGGCTAATTGAACAAAAAGAAAACTGGGCTTAA
JMFF049O12+ AGGAGTATTGAAACAATGAAGCGAAAATGGCTAATTGAACAAAAAGAAAACTGGGCTTAA
JMSF042M03+ AGGAGTATTGAAACAATGAAGCGAAAATGGCTAATTGAACAAAAAGAAAACTGGGCTTAA
____________________________________________________________
consensus AGGAGTATTGAAACAATGAAGCGAAAATGGCTAATTGAACAAAAAGAAAACTGGGCTTAA
. : . : . : . : . : . :
JMFN036N21+ GAAGAGAAGCCATTGTAACTTTGTTAGCTGAACAGAAGAGAA
JMFF027E22+ GAAGAGAAGCCATTGTAACTTTGTTAGCTGAACAGAAGAGAAATTAAGTTGGAAGTGAT
JMFF049O12+ GAAGAGAAGCCATTGTAACTTTGTTAGCTGAACAGAAGAGAAATTAAGTTGGAAGTGAT
JMSF042M03+ GAAGAGAAGCCATTGTAACTTTGTTAGCTGAACAGAAGAGAAATTAAGTTGGAAGTGATC
____________________________________________________________
consensus GAAGAGAAGCCATTGTAACTTTGTTAGCTGAACAGAAGAGAAATTAAGTTGGAAGTGATC