Contig 002405:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010F10Sequence570002405 (2)ref|XP_009625584.1|4e-86PREDICTED: histone deacetylase 8 isoform X2 [Nicotiana tomentosiformis]753010063 (2)ref|XP_009625583.1|1e-76PREDICTED: histone deacetylase 8 isoform X1 [Nicotiana tomentosiformis]
JMSF042K13Sequence821002405 (2)ref|XP_009625584.1|6e-141PREDICTED: histone deacetylase 8 isoform X2 [Nicotiana tomentosiformis]838010063 (2)ref|XP_009804418.1|1e-61PREDICTED: histone deacetylase 8 isoform X1 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042K13+ GGGCAAAGGGACATTCAAATTATACCCGAATCCTTTACNTT
                      ____________________________________________________________
consensus GGGCAAAGGGACATTCAAATTATACCCGAATCCTTTACNTT
 
. : . : . : . : . : . :
JMSF042K13+ CGCCAAGCTCATCCACAGCTCCATTNTGAGGATGCGAGGGGCCCCAAGAACCATGGTTCA
                      ____________________________________________________________
consensus CGCCAAGCTCATCCACAGCTCCATTNTGAGGATGCGAGGGGCCCCAAGAACCATGGTTCA
 
. : . : . : . : . : . :
JMSF042K13+ TGTGCAGGGAGATGGTGAGAACTCTGTCAGAGCGATAAAACCCTTCTGCAGTGCCATTCC
                      ____________________________________________________________
consensus TGTGCAGGGAGATGGTGAGAACTCTGTCAGAGCGATAAAACCCTTCTGCAGTGCCATTCC
 
. : . : . : . : . : . :
JMSF042K13+ CGTAATGGACATCAATGTCAATAACCGTGACCTTTTCATGTCCAGAATCCAGAGCTAGTT
                      ____________________________________________________________
consensus CGTAATGGACATCAATGTCAATAACCGTGACCTTTTCATGTCCAGAATCCAGAGCTAGTT
 
. : . : . : . : . : . :
JMFF010F10+ TGTTGAGGAAGCAATAGCCATCAGCTCGAGCAGGCTGGGCGT
JMSF042K13+ GCACTGCGAGGCCAGCATTGTTGAGGAAGCAATAGCCATCAGCTCGAGCAGGCTGGGCGT
                      ____________________________________________________________
consensus GCACTGCGAGGCCAGCATTGTTGAGGAAGCAATAGCCATCAGCTCGAGCAGGCTGGGCGT
 
. : . : . : . : . : . :
JMFF010F10+ GATGGCCAGGCGGCCTGACCAACGCGTAGGCAATGCTCCCATTTCCATCGAGAATGTGTT
JMSF042K13+ GATGGCCAGGCGGCCTGACCAACGCGTAGGCAATGCTCCCATTTCCATCGAGAATGTGTT
                      ____________________________________________________________
consensus GATGGCCAGGCGGCCTGACCAACGCGTAGGCAATGCTCCCATTTCCATCGAGAATGTGTT
 
. : . : . : . : . : . :
JMFF010F10+ TCATTGCTGATAATGTTGTGCCAGCCGCCAGAAGTGCAGCATCCCATGAACCTGGATTTA
JMSF042K13+ TCATTGCTGATAATGTTGTGCCAGCCGCCAGAAGTGCAGCATCCCATGAACCTGGATTTA
                      ____________________________________________________________
consensus TCATTGCTGATAATGTTGTGCCAGCCGCCAGAAGTGCAGCATCCCATGAACCTGGATTTA
 
. : . : . : . : . : . :
JMFF010F10+ AGAATGTCCCTGAACAGATCTCTTTCCCGCCACTTCTGTCTGCTTCAATCAGCTCATTTA
JMSF042K13+ AGAATGTCCCTGAACAGATCTCTTTCCCGCCACTTCTGTCTGCTTCAATCAGCTCATTTA
                      ____________________________________________________________
consensus AGAATGTCCCTGAACAGATCTCTTTCCCGCCACTTCTGTCTGCTTCAATCAGCTCATTTA
 
. : . : . : . : . : . :
JMFF010F10+ CATACTCTTGAGTGTGGAAAGAGAGCAATTCGGAGAGGAGAGCAGGTCTGCCATGGTGCC
JMSF042K13+ CATACTCTTGAGTGTGGAAAGAGAGCAATTCGGAGAGGAGAGCAGGTCTGCCATGGTGCC
                      ____________________________________________________________
consensus CATACTCTTGAGTGTGGAAAGAGAGCAATTCGGAGAGGAGAGCAGGTCTGCCATGGTGCC
 
. : . : . : . : . : . :
JMFF010F10+ AAGAAATGAAGGGAGAAATTGGGCCTCTTTTGAGGATGGAGACCATATTCCTCACTCTAT
JMSF042K13+ AAGAAATGAAGGGAGAAATTGGGCCTCTTTTGAGGATGGAGACCATATTCCTCACTCTAT
                      ____________________________________________________________
consensus AAGAAATGAAGGGAGAAATTGGGCCTCTTTTGAGGATGGAGACCATATTCCTCACTCTAT
 
. : . : . : . : . : . :
JMFF010F10+ CGGCATTCTCCGGGTGATTCTCCAGCACATCCAGAAACCCCGGGTCAATCCCGGTGTCAA
JMSF042K13+ CGGCATTCTCCGGGTGATTCTCCAGCACATCCAGAAACCCCGGGTCAATCCCGGTGTCAA
                      ____________________________________________________________
consensus CGGCATTCTCCGGGTGATTCTCCAGCACATCCAGAAACCCCGGGTCAATCCCGGTGTCAA
 
. : . : . : . : . : . :
JMFF010F10+ ACATGCCTTTTCCGGCGTCGTGGCTCAGCATGCCCTCGTGCCAGAATACGTGGATGAGAT
JMSF042K13+ ACATGCCTTTTCCGGCGTCGTGGCTCAGCATGCCCTCGTGCCAGAATACGTGGATGAGAT
                      ____________________________________________________________
consensus ACATGCCTTTTCCGGCGTCGTGGCTCAGCATGCCCTCGTGCCAGAATACGTGGATGAGAT
 
. : . : . : . : . : . :
JMFF010F10+ CTCCGGCCGCCGGAGAAGAAGGCGTAGCTTTAGCTGAAGCCATGGGAGAGTATCCAATTT
JMSF042K13+ CTCCGGCCGCCGGAGAAGAAGGCGTAGCTTTAGCTGAAGCCATGGGAGAGTATCCAATTT
                      ____________________________________________________________
consensus CTCCGGCCGCCGGAGAAGAAGGCGTAGCTTTAGCTGAAGCCATGGGAGAGTATCCAATTT
 
. : . : . : . : . : . :
JMFF010F10+ CAGTTCTGCTATTGACTTCACTTCTCTTCCCGTTAGATACTGAAGACT
JMSF042K13+ CAGTTCTGCTATTGACTTCACTTCTCTTCCCGTTAGATACTGAAGACTGAAGAGTATCTC
                      ____________________________________________________________
consensus CAGTTCTGCTATTGACTTCACTTCTCTTCCCGTTAGATACTGAAGACTGAAGAGTATCTC