| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF042C01 | Sequence | 657 | 002404 (5) | ref|XP_006368294.1| | 3e-70 | hypothetical protein POPTR_0001s01380g [Populus trichocarpa] gb|ERP64863.1| hypo | 243 | 020239 | |||
| JMFS091B04 | Sequence | 627 | 002404 (5) | ref|XP_011092623.1| | 6e-67 | PREDICTED: probable methyltransferase PMT20 [Sesamum indicum] ref|XP_011092624.1 | |||||
| JMSF020O22 | Sequence | 683 | 002404 (5) | ref|XP_011092623.1| | 1e-76 | PREDICTED: probable methyltransferase PMT20 [Sesamum indicum] ref|XP_011092624.1 | 103 | 017138 | |||
| JMSF039A15 | Sequence | 691 | 002404 (5) | ref|XP_011092623.1| | 1e-78 | PREDICTED: probable methyltransferase PMT20 [Sesamum indicum] ref|XP_011092624.1 | |||||
| JMSF042H19 | Sequence | 770 | 002404 (5) | ref|XP_006368294.1| | 2e-61 | hypothetical protein POPTR_0001s01380g [Populus trichocarpa] gb|ERP64863.1| hypo | 102 | 015137 | |||
This contig is upended
. : . : . : . : . : . :
JMSF042H19+ CTTTCTTTAGCCAATGTTGGTTAGATTTTTGTTTGTTAATCCAATCATAT
____________________________________________________________
consensus CTTTCTTTAGCCAATGTTGGTTAGATTTTTGTTTGTTAATCCAATCATAT
. : . : . : . : . : . :
JMSF042H19+ GGAACATTTCTGAAACAATATCCTAGCAGTTAATTAATGTTGGGTCCATGGTTGGAAATT
____________________________________________________________
consensus GGAACATTTCTGAAACAATATCCTAGCAGTTAATTAATGTTGGGTCCATGGTTGGAAATT
. : . : . : . : . : . :
JMSF020O22+ CTGTACCAACATTCATCTCTGCTCTTTGG
JMFF042C01+ CTGTACCAACATTCATCTCTGCTCTTTGG
JMSF039A15+ CTGTACCAACATTCATCTCTGCTCTTTGG
JMFS091B04+ AATCATATGGAACATTTCTGTACCAACATTCATCTCTGCTCTTTGG
JMSF042H19+ CAATCAAAAACCGGAAAGCTAGCTACCCTACCTGTACCAACATTCATCTCTGCTCTTTGG
____________________________________________________________
consensus CAATCAAAAACCGGAATGCTATGTACCCTTTCTGTACCAACATTCATCTCTGCTCTTTGG
. : . : . : . : . : . :
JMSF020O22+ CCATCTGATGGGCGATTTATAGCCATCAGGTGGAGGAACCAAACATTCCTGTCTTTCAAA
JMFF042C01+ CCATCTGATGGGCGATTTATAGCCATCAGGTGGAGGAACCAAACATTCCTGTCTTTCAAA
JMSF039A15+ CCATCTGATGGGCGATTTATAGCCATCAGGTGGAGGAACCAAACATTCCTGTCTTTCAAA
JMFS091B04+ CCATCTGATGGGCGATTTATAGCCATCAGGTGGAGGAACCAAACATTCCTGTCTTTCAAA
JMSF042H19+ CCATCTGATGGGCGATTTATAGCCATCAGGTGGAGGAACCAAACATTCCTGTCTTTCAAA
____________________________________________________________
consensus CCATCTGATGGGCGATTTATAGCCATCAGGTGGAGGAACCAAACATTCCTGTCTTTCAAA
. : . : . : . : . : . :
JMSF020O22+ CATCGGAGGGCAGTGGCGTTCCAAGAAACTTAACCGATGAGGATCGTACCTCCTCCACCT
JMFF042C01+ CATCGGAGGGCAGTGGCGTTCCAAGAAACTTAACCGATGAGGATCGTACCTCCTCCACCT
JMSF039A15+ CATCGGAGGGCAGTGGCGTTCCAAGAAACTTAACCGATGAGGATCGTACCTCCTCCACCT
JMFS091B04+ CATCGGAGGGCAGTGGCGTTCCAAGAAACTTAACCGATGAGGATCGTACCTCCTCCACCT
JMSF042H19+ CATCGGAGGGCAGTGGCGTTCCAAGAAACTTAACCGATGAGGATCGTACCTCCTCCACCT
____________________________________________________________
consensus CATCGGAGGGCAGTGGCGTTCCAAGAAACTTAACCGATGAGGATCGTACCTCCTCCACCT
. : . : . : . : . : . :
JMSF020O22+ CTTCGGATCTGTGCACGGGGTGTAGTCTTGTGAGTCCGGGCTGCACTCAGGAAAGGAAGT
JMFF042C01+ CTTCGGATCTGTGCACGGGGTGTAGTCTTGTGAGTCCGGGCTGCACTCAGGAAAGGAAGT
JMSF039A15+ CTTCGGATCTGTGCACGGGGTGTAGTCTTGTGAGTCCGGGCTGCACTCAGGAAAGGAAGT
JMFS091B04+ CTTCGGATCTGTGCACGGGGTGTAGTCTTGTGAGTCCGGGCTGCACTCAGGAAAGGAAGT
JMSF042H19+ NTTCGGATCTGTGCACGGGGTGTAGTCTTGTGAGTCCGGGCTGCACTCAGGAAAGGAAGT
____________________________________________________________
consensus CTTCGGATCTGTGCACGGGGTGTAGTCTTGTGAGTCCGGGCTGCACTCAGGAAAGGAAGT
. : . : . : . : . : . :
JMSF020O22+ GACTTTGATTTGCAGCGTGCCAGAGCCCGAGCCCGAGCTAGAGGCAATTTCCTTGGGAGA
JMFF042C01+ GACTTTGATTTGCAGCGTGCCAGAGCCCGAGCCCGAGCTAGAGGCAATTTCCTTGGGAGA
JMSF039A15+ GACTTTGATTTGCAGCGTGCCAGAGCCCGAGCCCGAGCTAGAGGCAATTTCCTTGGGAGA
JMFS091B04+ GACTTTGATTTGCAGCGTGCCAGAGCCCGAGCCCGAGCTAGAGGCAATTTCCTTGGGAGA
JMSF042H19+ GACTTTGATTTGCAGCGTGCCAGAGCCCGAGCCCGAGCTAGAGGCAATTTCCTTGGGAGA
____________________________________________________________
consensus GACTTTGATTTGCAGCGTGCCAGAGCCCGAGCCCGAGCTAGAGGCAATTTCCTTGGGAGA
. : . : . : . : . : . :
JMSF020O22+ TTCATCGTTCTTGCCAACATCATTAACAACAAATCTCTCCTTCTCAGAACAGAAGATCCT
JMFF042C01+ TTCATCGTTCTTGCCAACATCATTAACAACAAATCTCTCCTTCTCAGAACAGAAGATCCT
JMSF039A15+ TTCATCGTTCTTGCCAACATCATTAACAACAAATCTCTCCTTCTCAGAACAGAAGATCCT
JMFS091B04+ TTCATCGTTCTTGCCAACATCATTAACAACAAATCTCTCCTTCTCAGAACAGAAGATCCT
JMSF042H19+ TTCATCGTTCTTGCCAACATCATTAACAACAAATCTCTCCTTCTCAGAACAGAAGATCCT
____________________________________________________________
consensus TTCATCGTTCTTGCCAACATCATTAACAACAAATCTCTCCTTCTCAGAACAGAAGATCCT
. : . : . : . : . : . :
JMSF020O22+ ACCAAGATAGAACGAAAACCCACACAGCACCAAGAACAGTATTGCCACCTGGACTTTCCT
JMFF042C01+ ACCAAGATAGAACGAAAACCCACACAGCACCAAGAACAGTATTGCCACCTGGACTTTCCT
JMSF039A15+ ACCAAGATAGAACGAAAACCCACACAGCACCAAGAACAGTATTGCCACCTGGACTTTCCT
JMFS091B04+ ACCAAGATAGAACGAAAACCCACACAGCACCAAGAACAGTATTGCCACCTGGACTTTCCT
JMSF042H19+ ACCAAGATAGAACGAAAACCCACACAGCACCAAGAACAGTATTGCCACCTGGACTTTCCT
____________________________________________________________
consensus ACCAAGATAGAACGAAAACCCACACAGCACCAAGAACAGTATTGCCACCTGGACTTTCCT
. : . : . : . : . : . :
JMSF020O22+ CGAACTTTTATCCGGGTGAGTTAAGGGCTTCCCATCTTTATCTTTATGCTTCATGGTCCT
JMFF042C01+ CGAACTTTTATCCGGGTGAGTTAAGGGCTTCCCATCTTTATCTTTATGCTTCATGGTCCT
JMSF039A15+ CGAACTTTTATCCGGGTGAGTTAAGGGCTTCCCATCTTTATCTTTATGCTTCATGGTCCT
JMFS091B04+ CGAACTTTTATCCGGGTGAGTTAAGGGCTTCCCATCTTTATCTTTATGCTTCATGGTCCT
JMSF042H19+ CGAACTTTTATCCGGGTGAGTTAAGGGCTTCCCATCTTTATCTTTATGCTTCATGGTCCT
____________________________________________________________
consensus CGAACTTTTATCCGGGTGAGTTAAGGGCTTCCCATCTTTATCTTTATGCTTCATGGTCCT
. : . : . : . : . : . :
JMSF020O22+ TAGTTTAATCAACTATTTCTCTGACACACAAGATATCAGGAAAAGTGTAAAGAACCCAGA
JMFF042C01+ TAGTTTAATCAACTATTTCTCTGACACACAAGATATCAGGAAAAGTGTAAAGAACCCAGA
JMSF039A15+ TAGTTTAATCAACTATTTCTCTGACACACAAGATATCAGGAAAAGTGTAAAGAACCCAGA
JMFS091B04+ TAGTTTAATCAACTATTTCTCTGACACACAAGATATCAGGAAAAGTGTAAAGAACCCAGA
JMSF042H19+ TAGTTTAATCAACTATTTCTCTGACACACAAGATATCAGGAAAAGTGTAAAGAACCCAGA
____________________________________________________________
consensus TAGTTTAATCAACTATTTCTCTGACACACAAGATATCAGGAAAAGTGTAAAGAACCCAGA
. : . : . : . : . : . :
JMSF020O22+ TTTCTTCTCTCCCAGTCACTCTCTTCAGCTCCAAAGCCACCCAAGATTGTGAATTGAAGC
JMFF042C01+ TTTCTTCTCTCCCAGTCACTCTCTTCAGCTCCAAAGCCACCCAAGATTGTGAATTGAAGC
JMSF039A15+ TTTCTTCTCTCCCAGTCACTCTCTTCAGCTCCAAAGCCACCCAAGATTGTGAATTGAAGC
JMFS091B04+ TTTCTTCTCTCCCAGTCACTCTCTTCAGCTCCAAAGCCACCCAAGATTGTGAATTGAAGC
JMSF042H19+ TTTCTTCTCTCCCAGTCACTCTCTTCAGCTCCAAAGCCACCCAAGATTGTGAATTGAAGC
____________________________________________________________
consensus TTTCTTCTCTCCCAGTCACTCTCTTCAGCTCCAAAGCCACCCAAGATTGTGAATTGAAGC
. : . : . : . : . : . :
JMSF020O22+ AAGGGAAGAGGAAAGGGAGAGGGGGGTTTAGAAGTGAAGGAGAGATGAGGAGGGTAG
JMFF042C01+ AAGGGAAGAGGAAAGGGAGAGGGGGGTTTAGAAGTGAAGGAGAGATGAGGAGGGTAG
JMSF039A15+ AAGGGAAGAGGAAAGGGAGAGGGGGGTTTAGAAGTGAAGGAGAGATGAGGAGGGTAG
JMFS091B04+ AAGGGAAGAGGAAAGGGAGAGGGGGGTTTAGAAGTGAAGGA
JMSF042H19+ AAGGGAAGAGGAAAGGGAGAGGGGGGTTTAGAAGTGAAGGAGAGATGAGGAGGGTAGTCC
____________________________________________________________
consensus AAGGGAAGAGGAAAGGGAGAGGGGGGTTTAGAAGTGAAGGAGAGATGAGGAGGGTAGTCC