Contig 002401:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013C22Sequence562002401 (8)gb|ADY38393.2|4e-88MYB1 [Leucaena leucocephala]
JMFF014E08Sequence139002401 (8)
JMFF016A03Sequence608002401 (8)ref|XP_010028718.1|2e-92PREDICTED: myb-related protein 308-like [Eucalyptus grandis] gb|KCW55514.1| hypo
JMFF046M24Sequence598002401 (8)gb|AIE54279.1|3e-88transcription factor [Nicotiana tabacum]497002401 (8)ref|XP_006359691.1|6e-16PREDICTED: myb-related protein 308-like [Solanum tuberosum]
JMSF008K16Sequence363002401 (8)gb|KHF99993.1|9e-37Myb-related protein [Gossypium arboreum]
JMSF041O04Sequence743002401 (8)gb|AID56314.1|1e-97MYB2 [Eriobotrya japonica]119002401 (8)

Alignment

This contig is upended


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rJMFF014E08-                   ATCGGAAAGATCGATTTTAGATTANTACGTACAGCTCTCTTTCTCACTTCT
rJMSF041O04-                                               GTACAGCTCTCTTTCTCACTTCT
                      ____________________________________________________________
consensus                      ATCGGAAAGATCGATTTTAGATTANTACGTACAGCTCTCTTTCTCACTTCT
 
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rJMFF014E08-          CTCTTGCCATTTCTTGTATCTATCTTATCTTAATAATTGACAATANAATCAGAAATTAAA
rJMSF041O04-          CTCTTGCCATTTCTTGTATCTATCTTATCTTAATAATTGACAATAAAATCAGAAATTAAA
rJMFF046M24-                             CTATCTTATCTTAATAATTGACAATAAAATCAGAAATTAAA
                      ____________________________________________________________
consensus             CTCTTGCCATTTCTTGTATCTATCTTATCTTAATAATTGACAATAAAATCAGAAATTAAA
 
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rJMFF014E08-          GGACCCAAAAAAAAAAAAAAA                                       
rJMSF041O04-          GGACCCAAAAAAAAAAAAAAA                                       
rJMFF046M24-          GGACCCAAAAAAAAAAAAAAAGAGTAGTCTGTAGTATATTATCGATCAGTTCATCATCTC
                      ____________________________________________________________
consensus             GGACCCAAAAAAAAAAAAAAAGAGTAGTCTGTAGTATATTATCGATCAGTTCATCATCTC
 
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rJMFF046M24-          CAAGTTTCTGTAGTCCAAAAGGGCGTTGTTTCTTAACCCTAGAAAATCGTAGCCTGCGGC
                      ____________________________________________________________
consensus             CAAGTTTCTGTAGTCCAAAAGGGCGTTGTTTCTTAACCCTAGAAAATCGTAGCCTGCGGC
 
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rJMFF046M24-          GATACTGGTTATGGCGTTTGCGGTGGCGCTTCCGGTGGCGTAACATCCATTTCCGTTGGT
                      ____________________________________________________________
consensus             GATACTGGTTATGGCGTTTGCGGTGGCGCTTCCGGTGGCGTAACATCCATTTCCGTTGGT
 
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rJMFF046M24-          GGTGCAGGTACAGTCTTTACTGTTCTGTATTCCCAAACTGCATGCAAAACATACTACGGT
                      ____________________________________________________________
consensus             GGTGCAGGTACAGTCTTTACTGTTCTGTATTCCCAAACTGCATGCAAAACATACTACGGT
 
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rJMFF046M24-          GGTGTTGTCAACGTTGACTAGGCTCCCCGGAGCTGATCCGGCAGTGAACGTTAATGGCGG
                      ____________________________________________________________
consensus             GGTGTTGTCAACGTTGACTAGGCTCCCCGGAGCTGATCCGGCAGTGAACGTTAATGGCGG
 
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rJMFF046M24-          TTGTTGATTGTTTGGCTGGTAAGGGGGGCTGATTCTGAGCTCCAGGTTTAAGTCCGGGCA
JMSF041O04+                                                AGCTCCAGGTTTAAGTCCGGGCA
                      ____________________________________________________________
consensus             TTGTTGATTGTTTGGCTGGTAAGGGGGGCTGATTCTGAGCTCCAGGTTTAAGTCCGGGCA
 
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rJMFF046M24-          GCGTTCACGGCGTACCGGGCTCGTGGAATATTCTTGTTTTACTGTCGTTGTCGTTGGAAG
JMSF041O04+           GCGTTCACGGCGTACCGGGCTCGTGGAATATTCTTGTTTTACNGTCGTTGTCGTTGGAAG
                      ____________________________________________________________
consensus             GCGTTCACGGCGTACCGGGCTCGTGGAATATTCTTGTTTTACTGTCGTTGTCGTTGGAAG
 
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rJMFF046M24-          AGAATCTTGAGGGATCATCTTCTTCTTCTCATCGTC                        
JMFF016A03+                                                              TTGTGCGGG
JMSF041O04+           AGAATCTTGAGGGATCATCTTCTTCTTCTCATCGTCGACGTCTTCTTCTTCTTGTGCGGG
                      ____________________________________________________________
consensus             AGAATCTTGAGGGATCATCTTCTTCTTCTCATCGTCGACGTCTTCTTCTTCTTGTGCGGG
 
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JMFF016A03+           ACCAAAAGAAATGGTTGTCACTTTTTCCTTGGGATCGTCCATGGGGCGGTGAGTAGTCGG
JMFF046M24+                                          GGATCGTCCATGGGGCGGTGAGTAGTCGG
JMFF013C22+                                          GGATCGTCCATGGGGCGGTGAGTAGTCGG
JMSF041O04+           ACCAAAAGAAATGGTTGTCACTTTTTCCTTGGGATCGTCCATGGGGCGGTGAGTAGTCGG
                      ____________________________________________________________
consensus             ACCAAAAGAAATGGTTGTCACTTTTTCCTTGGGATCGTCCATGGGGCGGTGAGTAGTCGG
 
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JMFF016A03+           ATCAATTCCCCGGCTCAGCAGTTTCCTTCTTATGTGGGTATTCCAATAATTCTTTATCTC
JMFF046M24+           ATCAATTCCCCGGCTCAGCAGTTTCCTTCTTATGTGGGTATTCCAATAATTCTTTATCTC
JMFF013C22+           ATCAATTCCCCGGCTCAGCAGTTTCCTTCTTATGTGGGTATTCCAATAATTCTTTATCTC
JMSF041O04+           ATCAATTCCCCGGCTCAGCAGTTTCCTTCTTATGTGGGTATTCCAATAATTCTTTATCTC
                      ____________________________________________________________
consensus             ATCAATTCCCCGGCTCAGCAGTTTCCTTCTTATGTGGGTATTCCAATAATTCTTTATCTC
 
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JMFF016A03+           ATTATCCGTTCTTCCCGGTAATCTTCCAGCTATAAGAGACCACTTGTTGCCTAGGAGGCT
JMFF046M24+           ATTATCCGTTCTTCCCGGTAATCTTCCAGCTATAAGAGACCACTTGTTGCCTAGGAGGCT
JMFF013C22+           ATTATCCGTTCTTCCCGGTAATCTTCCAGCTATAAGAGACCACTTGTTGCCTAGGAGGCT
JMSF041O04+           ATTATCCGTTCTTCCCGGTAATCTTCCAGCTATAAGAGACCACTTGTTGCCTAGGAGGCT
                      ____________________________________________________________
consensus             ATTATCCGTTCTTCCCGGTAATCTTCCAGCTATAAGAGACCACTTGTTGCCTAGGAGGCT
 
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JMFF016A03+           GTGAAGTTTGATAATAAGCTCATCTTCTTCCTCGGTGAAGTTTCCGCGCTTGAGGTCAGG
JMFF046M24+           GTGAAGTTTGATAATAAGCTCATCTTCTTCCTCGGTGAAGTTTCCGCGCTTGAGGTCAGG
JMFF013C22+           GTGAAGTTTGATAATAAGCTCATCTTCTTCCTCGGTGAAGTTTCCGCGCTTGAGGTCAGG
JMSF008K16+                                                                   CAGG
JMSF041O04+           GTGAAGTTTGATAATAAGCTCATCTTCTTCCTCGGTGAAGTTTCCGCGCTTGAGGTCAGG
                      ____________________________________________________________
consensus             GTGAAGTTTGATAATAAGCTCATCTTCTTCCTCGGTGAAGTTTCCGCGCTTGAGGTCAGG
 
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JMFF016A03+           GCGCAAGTAGTTGATCCAGCGGAGGCGGCAGCTCTTGCCGCAGCGGAGGAGTCCGGCGGC
JMFF046M24+           GCGCAAGTAGTTGATCCAGCGGAGGCGGCAGCTCTTGCCGCAGCGGAGGAGTCCGGCGGC
JMFF013C22+           GCGCAAGTAGTTGATCCAGCGGAGGCGGCAGCTCTTGCCGCAGCGGAGGAGTCCGGCGGC
JMSF008K16+           GCGCAAGTAGTTGATCCAGCGGAGGCGGCAGCTCTTGCCGCAGCGGAGGAGTCCGGCGGC
JMSF041O04+           GCGCAAGTAGTTGATCCAGCGGAGGCGGCAGCTCTTGCCGCAGCGGAGGAGTCCGGCGGC
                      ____________________________________________________________
consensus             GCGCAAGTAGTTGATCCAGCGGAGGCGGCAGCTCTTGCCGCAGCGGAGGAGTCCGGCGGC
 
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JMFF016A03+           CTTGGGGAGGGAGCGCCAGCAACCTTCGCCGTGGGCTCTGATGTAAGCTATAAGCCTTTC
JMFF046M24+           CTTGGGGAGGGAGCGCCAGCAACCTTCGCCGTGGGCTCTGATGTAAGCTATAAGCCTTTC
JMFF013C22+           CTTGGGGAGGGAGCGCCAGCAACCTTCGCCGTGGGCTCTGATGTAAGCTATAAGCCTTTC
JMSF008K16+           CTTGGGGAGGGAGCGCCAGCAACCTTCGCCGTGGGCTCTGATGTAAGCTATAAGCCTTTC
JMSF041O04+           CTTGGGGAGGGAGCGCCAGCAACCTTCGCCGTGGGCTCTGATGTAAGCTATAAGCCTTTC
                      ____________________________________________________________
consensus             CTTGGGGAGGGAGCGCCAGCAACCTTCGCCGTGGGCTCTGATGTAAGCTATAAGCCTTTC
 
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JMFF016A03+           GTCTTCTTCTTTAGTCCAAGCGCCCTTGTTGGTGTGAGCTTTCTCACAGCAAGGAGACCT
JMFF046M24+           GTCTTCTTCTTTAGTCCAAGCGCCCTTGTTGGTGTGAGCTTTCTCACAGCAAGGAGACCT
JMFF013C22+           GTCTTCTTCTTTAGTCCAAGCGCCCTTGTTGGTGTGAGCTTTCTCACAGCAAGGAGACCT
JMSF008K16+           GTCTTCTTCTTTAGTCCAAGCGCCCTTGTTGGTGTGAGCTTTCTCACAGCAAGGAGACCT
JMSF041O04+           GTCTTCTTCTTTAGTCCAAGCGCCCTTGTTGGTGTGAGCTTTCTCACAGCAAGGAGACCT
                      ____________________________________________________________
consensus             GTCTTCTTCTTTAGTCCAAGCGCCCTTGTTGGTGTGAGCTTTCTCACAGCAAGGAGACCT
 
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JMFF016A03+           TCCCATAATCGACCACAGACCTAACTACTTTTTTCTTGAATTGAGGTTTCTTTATTTTCT
JMFF046M24+           TCCCATAATCGACCACAGACCTAACTACTTTTTTCTTGAATTGAGGTTTCTTTATTTTCT
JMFF013C22+           TCCCATAATCGACCACAGACCTAACTACTTTTTTCTTGAATTGAGGTTTCTTTATTTTCT
JMSF008K16+           TCCCATAATCGACCACAGACCTAACTACTTTTTTCTTGAATTGAGGTTTCTTTATTTTCT
JMSF041O04+           TCCCATAATCGACCACAGACCTAACTACTTTTTTCTTGAATTGAGGTTTCTTTATTTTCT
                      ____________________________________________________________
consensus             TCCCATAATCGACCACAGACCTAACTACTTTTTTCTTGAATTGAGGTTTCTTTATTTTCT
 
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JMFF016A03+           TTCTATTTCTGTGTTTCTTTCGGGGGTTGATTACTGTTAGTAGCTAGTAGACTAGTAGAA
JMFF046M24+           TTCTATTTCTGTGTTTCTTTCGGGGGTTGATTACTGTTAGTAGCTAGTAGACTAGTAGAA
JMFF013C22+           TTCTATTTCTGTGTTTCTTTCGGGGGTTGATTACTGTTAGTAGCTAGTAGACTAGTAGAA
JMSF008K16+           TTCTATTTCTGTGTTTCTTTCGGGGGTTGATTACTGTTAGTAGCTAGTAGACTAGTAGAA
JMSF041O04+           TTCTATTTCTGTGTTTCTTTCGGGGGTTGATTACTGTTAGTAGCTAGTAGACTAGTAGAA
                      ____________________________________________________________
consensus             TTCTATTTCTGTGTTTCTTTCGGGGGTTGATTACTGTTAGTAGCTAGTAGACTAGTAGAA
 
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JMFF016A03+           ATAGAATAGAAGTTGCAATCTTGAATTGGTGTATGTAAATGAGAACATCTATCAAGGC  
JMFF046M24+           ATAGAATAGAAGTTGCAATCTTGAATTGGTGTATGTAAATGAGAACATCTATCAAGGC  
JMFF013C22+           ATAGAATAGAAGTTGCAATCTTGAATTGGTGTATGTAAATGAGAACATCTATC       
JMSF008K16+           ATAGAATAGAAGTTGCAATCTTGAATTGGTGTATGTAAATGAGAACATCTATCAAGGC  
JMSF041O04+           ATAGAATAGAAGTTGCAATCTTGAATTGGTGTATGTAAATGAGAACATCTATCAAGGCTC
                      ____________________________________________________________
consensus             ATAGAATAGAAGTTGCAATCTTGAATTGGTGTATGTAAATGAGAACATCTATCAAGGCTC