Contig 002399:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041J16+                                               TGGGAGTTGACGGTAACGAGCTTG
                      ____________________________________________________________
consensus                                                 TGGGAGTTGACGGTAACGAGCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041J16+           GATTCGACGGAACCGTNTGAGAAGACGAGGAATTTAACGGCCGTCCGGCGTGTGAACACC
                      ____________________________________________________________
consensus             GATTCGACGGAACCGTNTGAGAAGACGAGGAATTTAACGGCCGTCCGGCGTGTGAACACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041J16+           GCAGCTGAGGGGACCCACACAGCCCTTCGTTTCCGGCGAAGCTATTCCCGCCGAAGCGTT
                      ____________________________________________________________
consensus             GCAGCTGAGGGGACCCACACAGCCCTTCGTTTCCGGCGAAGCTATTCCCGCCGAAGCGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041J16+           TGTATAAACTCCGAGGAAGCATCCCGTACAGCTCATTGTTAGATAAATTCAATTCCGTGA
                      ____________________________________________________________
consensus             TGTATAAACTCCGAGGAAGCATCCCGTACAGCTCATTGTTAGATAAATTCAATTCCGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041J16+           GTTGCTGGAGAGAATTCAAGGATTCCGGGATAATTCCGGAGAGTTCATTGTTCTGTAACC
                      ____________________________________________________________
consensus             GTTGCTGGAGAGAATTCAAGGATTCCGGGATAATTCCGGAGAGTTCATTGTTCTGTAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041J16+           GTAGAGTGAGAAGGCGTGAAATGTTCGAGATTTTCGCCGGGATTGAGCCTTTAAGGTTGT
                      ____________________________________________________________
consensus             GTAGAGTGAGAAGGCGTGAAATGTTCGAGATTTTCGCCGGGATTGAGCCTTTAAGGTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041J16+           TGTTGGAGAGGTCGAGGCGGAGGAGGCGGCGGAGAGAGGAGATTTCCGCCGGTATTTCAC
                      ____________________________________________________________
consensus             TGTTGGAGAGGTCGAGGCGGAGGAGGCGGCGGAGAGAGGAGATTTCCGCCGGTATTTCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003M03+                           GGAGAGGTAAATGAGCNTGANGTTGAGACAGTGGGTGATGGNAG
JMSF041J16+           CGGAAAAGTCATTTCCGGAGAGGTAAATGAGCTTGAGGTTGAGACAGTGGGTGATGGGAG
                      ____________________________________________________________
consensus             CGGAAAAGTCATTTCCGGAGAGGTAAATGAGCTTGAGGTTGAGACAGTGGGTGATGGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003M03+           CGAGAGAACCGTTGAGGCGGTTATCACGGAGGTCGAGGAGGCGGAGCTGGTCGAGGGAAG
JMSF041J16+           CGAGAGAACCGTTGAGGCGGTTATCACGGAGGTCGAGGAGGCTGAGCTGGTCGAGGGAAG
                      ____________________________________________________________
consensus             CGAGAGAACCGTTGAGGCGGTTATCACGGAGGTCGAGGAGGCTGAGCTGGTCGAGGGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003M03+           CGAGGGCGTCAATGGGGCCGCGGAGGTTGAGGGAAGGGAGGGACAGGGCGGTGACGCGGC
JMSF041J16+           CGAGGGCGTCAATGGGGCCGCGGAGGTTGAGGGAAGGGAGGGACAGGGCGGTGACGCGGC
                      ____________________________________________________________
consensus             CGAGGGCGTCAATGGGGCCGCGGAGGTTGAGGGAAGGGAGGGACAGGGCGGTGACGCGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003M03+           CGTTGGTGCAGTTTACGCCGACCCAATTGGCGGAGCAGGCGGTGGCGTTGAATGTAAGTG
JMSF041J16+           CGTTGGTGCAGTTTACGCCGACCCAATTGGCGGAGCAGGCGGTGGCGTTGAATGTAAGTG
                      ____________________________________________________________
consensus             CGTTGGTGCAGTTTACGCCGACCCAATTGGCGGAGCAGGCGGTGGCGTTGAATGTAAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003M03+           TCCAGTTGGAGAGGAGAGTGGCGTGGGGGTCGGTTTGGGAGCGGAAGAGGGCAAGGACGG
JMSF041J16+           TCCAGTTGGAGAGGAGAGTGGCGTGGGGGTCGGTTTGGGAGCGGAAGAGGGCAAGGACGG
                      ____________________________________________________________
consensus             TCCAGTTGGAGAGGAGAGTGGCGTGGGGGTCGGTTTGGGAGCGGAAGAGGGCAAGGACGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003M03+           CGGTGTCATTTGCCGCGGCGGCGAAGGTGGCGGTGGAGCACCAGCAAAAGAAGAAGAGGA
JMSF041J16+           CGGTGTCATTTGCCGCGGCGGCGAAGGTGGCGGTGGAGCACCAGCAAAAGAAGAAGAGGA
                      ____________________________________________________________
consensus             CGGTGTCATTTGCCGCGGCGGCGAAGGTGGCGGTGGAGCACCAGCAAAAGAAGAAGAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003M03+           TAAGAGACAACAACAAACGTTCCATTGGTTTAA                           
JMSF041J16+           TAAGAGACAACAACAAACGTTCCATTGGTTTAATGCATGACGAGCGGGAAGTCTGATTCC
                      ____________________________________________________________
consensus             TAAGAGACAACAACAAACGTTCCATTGGTTTAATGCATGACGAGCGGGAAGTCTGATTCC