Contig 002397:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF041F07+                                                            GGCTGGCTCC
JMSF041F07-                                                             GGCTGGCTCC
                      ____________________________________________________________
consensus                                                               GGCTGGCTCC
 
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rJMSF041F07+          ATGTGCAGTTTCTTCCCTATTCTCTATATATTCCCCACCCCTCACCCTCATCAGGCCTCA
JMSF041F07-           ATGTGCAGTTTCTTCCCTATTCTCTATATATTCCCCACCCCTCACCCTCATCAGGCCTCA
                      ____________________________________________________________
consensus             ATGTGCAGTTTCTTCCCTATTCTCTATATATTCCCCACCCCTCACCCTCATCAGGCCTCA
 
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rJMSF041F07+          ACGTTTTCTTGGAATAATTATTCTTGAACATTATTCTTGATGGGAAATCGCATGGCGAGA
JMSF041F07-           ACGTTTTCTTGGAATAATTATTCTTGAACATTATTCTTGATGGGAAATCGCATGGCGAGA
                      ____________________________________________________________
consensus             ACGTTTTCTTGGAATAATTATTCTTGAACATTATTCTTGATGGGAAATCGCATGGCGAGA
 
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rJMSF041F07+          AAAGCAGTTGTGGTTGGAGAAGCTGAGAAGATGAAGAAGAAGAACGAGGCGCCAGGAAAA
JMSF041F07-           AAAGCAGTTGTGGTTGGAGAAGCTGAGAAGATGAAGAAGAAGAACGAGGCGCCAGGAAAA
                      ____________________________________________________________
consensus             AAAGCAGTTGTGGTTGGAGAAGCTGAGAAGATGAAGAAGAAGAACGAGGCGCCAGGAAAA
 
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rJMSF041F07+          TCTGAACAGGAATGCAGAAAATCATCGACGAAAGAGGGAACGAAGCAGAAAAAAACAGTT
JMSF041F07-           TCTGAACAGGAATGCAGAAAATCATCGACGAAAGAGGGAACGAAGCAGAAAAAAACAGTT
                      ____________________________________________________________
consensus             TCTGAACAGGAATGCAGAAAATCATCGACGAAAGAGGGAACGAAGCAGAAAAAAACAGTT
 
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rJMSF041F07+          AGGTTTAGGGTGGACGACGGGGAAGACGAAGAAGAAAGGAGAAAATTAGGGGTGGTGAGG
JMSF041F07-           AGGTTTAGGGTGGACGACGGGGAAGACGAAGAAGAAAGGAGAAAATTAGGGGTGGTGAGG
                      ____________________________________________________________
consensus             AGGTTTAGGGTGGACGACGGGGAAGACGAAGAAGAAAGGAGAAAATTAGGGGTGGTGAGG
 
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rJMSF041F07+          ATTAGGCTTGTGGTGACGCGGGAGGAGCTGCGACAAATCTTGAATGGGGAGGAGTCGGGG
JMSF041F07-           ATTAGGCTTGTGGTGACGCGGGAGGAGCTGCGACAAATCTTGAATGGGGAGGAGTCGGGG
                      ____________________________________________________________
consensus             ATTAGGCTTGTGGTGACGCGGGAGGAGCTGCGACAAATCTTGAATGGGGAGGAGTCGGGG
 
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rJMSF041F07+          GGGCCGTATTCTTCGTCTAGCTCCGAGGAGTTGCTGGCAGCTATCAAGTTAGGGAGTAGA
JMSF041F07-           GGGCCGTATTCTTCGTCTAGCTCCGAGGAGTTGCTGGCAGCTATCAAGTTAGGGAGTAGA
                      ____________________________________________________________
consensus             GGGCCGTATTCTTCGTCTAGCTCCGAGGAGTTGCTGGCAGCTATCAAGTTAGGGAGTAGA
 
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rJMSF041F07+          AGAAGAAGAAGAAGAAGTAGCAGAATACGCATGGGTGATCAACGTTTTTCATCGAGTGAT
JMSF041F07-           AGAAGAAGAAGAAGAAGTAGCAGAATACGCATGGGTGATCAACGTTTTTCATCGAGTGAT
                      ____________________________________________________________
consensus             AGAAGAAGAAGAAGAAGTAGCAGAATACGCATGGGTGATCAACGTTTTTCATCGAGTGAT
 
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rJMSF041F07+          GGAGATATGAAGTCGAGAAAATGGAGGCCAGAACTGGAAAGCATCCCAGAGCTCTGACTA
JMSF041F07-           GGAGATATGAAGTCGAGAAAATGGAGGCCAGAACTGGAAAGCATCCCAGAGCTCTGACTA
                      ____________________________________________________________
consensus             GGAGATATGAAGTCGAGAAAATGGAGGCCAGAACTGGAAAGCATCCCAGAGCTCTGACTA
 
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rJMSF041F07+          CCCCTATTTGATCTTGATGTTTAATGTTGTATTTGGAACTGATATGATGTTGGTTCTCAT
JMSF041F07-           CCCCTATTTGATCTTGATGTTTAATGTTGTATTTGGAACTGATATGATGTTGGTTCTCAT
                      ____________________________________________________________
consensus             CCCCTATTTGATCTTGATGTTTAATGTTGTATTTGGAACTGATATGATGTTGGTTCTCAT
 
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rJMSF041F07+          TGTATACTGTTTTTGTTTTTCAAGTTTAGCTAGTTTTCCAGTATTTTTGTAATTACTGCA
JMSF041F07-           TGTATACTGTTTTTGTTTTTCAAGTTTAGCTAGTTTTCCAGTATTTTTGTAATTACTGCA
                      ____________________________________________________________
consensus             TGTATACTGTTTTTGTTTTTCAAGTTTAGCTAGTTTTCCAGTATTTTTGTAATTACTGCA
 
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rJMSF041F07+          C                                                           
JMSF041F07-           CATATGTATGTGGGTAATTTATGTCAACACCCATCTGGCAGCAATTCATTAAAAAAAAAA
                      ____________________________________________________________
consensus             CATATGTATGTGGGTAATTTATGTCAACACCCATCTGGCAGCAATTCATTAAAAAAAAAA