Contig 002394:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS055F01Sequence619002394 (6)ref|XP_009792005.1|4e-54PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris]
JMFS062H11Sequence620002394 (6)ref|XP_009792005.1|7e-31PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris]
JMFS064G04Sequence627002394 (6)ref|XP_009792005.1|3e-45PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris]
JMFS143D07Sequence616002394 (6)ref|XP_009792005.1|5e-46PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris]
JMSF041B19Sequence644002394 (6)ref|XP_009792005.1|2e-18PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris]655007245 (4)ref|XP_006387666.1|2e-43hypothetical protein POPTR_0701s00010g [Populus trichocarpa] gb|ERP46580.1| hypo
JMSF050I15Sequence674002394 (6)ref|XP_009792005.1|2e-39PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris]754007245 (4)ref|XP_009619127.1|2e-57PREDICTED: potassium transporter 7-like isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS055F01+ TCATTTCCATTAACT
                      ____________________________________________________________
consensus TCATTTCCATTAACT
 
. : . : . : . : . : . :
JMFS055F01+ GGGGCTTTACTAAACATCACACTAAATGTATATAATGGACTTGTCCCCACATCACCAAAG
JMFS143D07+ TGTATATAATGGACTTGTCCCCACATCACCAAAG
JMFS064G04+ TGTATATAATGGACTTGTCCCCACATCACCAAAG
JMSF050I15+ CCCACATCACCAAAG
                      ____________________________________________________________
consensus GGGGCTTTACTAAACATCACACTAAATGTATATAATGGACTTGTCCCCACATCACCAAAG
 
. : . : . : . : . : . :
JMFS055F01+ ACTGCTCCAAGTGTCTGAATGATCAATATGATTCTCCTGCCTAAAGTAGCATCCTCATAG
JMFS143D07+ ACTGCTCCAAGTGTCTGAATGATCAATATGATTCTCCTGCCTAAAGTAGCATCCTCATAG
JMFS064G04+ ACTGCTCCAAGTGTCTGAATGATCAATATGATTCTCCTGCCTAAAGTAGCATCCTCATAG
JMFS062H11+ CTGCCTAAAGTAGCATCCTCATAG
JMSF050I15+ ACTGCTCCAAGTGTCTGAATGATCAATATGATTCTCCTGCCTAAAGTAGCATCCTCATAG
                      ____________________________________________________________
consensus ACTGCTCCAAGTGTCTGAATGATCAATATGATTCTCCTGCCTAAAGTAGCATCCTCATAG
 
. : . : . : . : . : . :
JMFS055F01+ TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
JMFS143D07+ TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
JMFS064G04+ TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
JMFS062H11+ TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
JMSF050I15+ TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
JMSF041B19+ GAAAGAATCAATCNGAGGA
                      ____________________________________________________________
consensus TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
 
. : . : . : . : . : . :
JMFS055F01+ CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
JMFS143D07+ CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
JMFS064G04+ CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
JMFS062H11+ CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
JMSF050I15+ CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
JMSF041B19+ CCAGTCNGAATCAGCCGNTGCTNGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGN
                      ____________________________________________________________
consensus CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
 
. : . : . : . : . : . :
JMFS055F01+ TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
JMFS143D07+ TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
JMFS064G04+ TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
JMFS062H11+ TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
JMSF050I15+ TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
JMSF041B19+ TGCAGNGAATCATNGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
                      ____________________________________________________________
consensus TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
 
. : . : . : . : . : . :
JMFS055F01+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
JMFS143D07+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
JMFS064G04+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
JMFS062H11+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
JMSF050I15+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
JMSF041B19+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
                      ____________________________________________________________
consensus TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
 
. : . : . : . : . : . :
JMFS055F01+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
JMFS143D07+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
JMFS064G04+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
JMFS062H11+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
JMSF050I15+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
JMSF041B19+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
                      ____________________________________________________________
consensus TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
 
. : . : . : . : . : . :
JMFS055F01+ CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
JMFS143D07+ CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
JMFS064G04+ CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
JMFS062H11+ CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
JMSF050I15+ CACTTACCTC-AAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
JMSF041B19+ CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
                      ____________________________________________________________
consensus CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
 
. : . : . : . : . : . :
JMFS055F01+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
JMFS143D07+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
JMFS064G04+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
JMFS062H11+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
JMSF050I15+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
JMSF041B19+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
                      ____________________________________________________________
consensus GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
 
. : . : . : . : . : . :
JMFS055F01+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
JMFS143D07+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
JMFS064G04+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
JMFS062H11+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
JMSF050I15+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
JMSF041B19+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
                      ____________________________________________________________
consensus TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
 
. : . : . : . : . : . :
JMFS055F01+ TACT
JMFS143D07+ TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAG
JMFS064G04+ TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAGGGAACAGTATACATCG
JMFS062H11+ TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAGGGAACAGTATACATCGGACCTTC
JMSF050I15+ TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAGGGAACAGTATACATCGGACCTTC
JMSF041B19+ TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAGGGAACAGTATACATCGGACCTTC
                      ____________________________________________________________
consensus TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAGGGAACAGTATACATCGGACCTTC
 
. : . : . : . : . : . :
JMFS062H11+ CGATTCAGAAAATTTGTCATTTCTCAGTGCTCACCATTGACGTATTGACTCTATCA
JMSF050I15+ CGATTCAGAAAATTTGTCATTTCTCAGTGCTCACCATTGACGTATTGACTCTATCA
JMSF041B19+ CGATTCAGAAAATTTGTCATTTCTCAGTGCTCACCATTGACGTATTGACTCTATCACGTC
                      ____________________________________________________________
consensus CGATTCAGAAAATTTGTCATTTCTCAGTGCTCACCATTGACGTATTGACTCTATCACGTC