| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS055F01 | Sequence | 619 | 002394 (6) | ref|XP_009792005.1| | 4e-54 | PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris] | |||||
| JMFS062H11 | Sequence | 620 | 002394 (6) | ref|XP_009792005.1| | 7e-31 | PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris] | |||||
| JMFS064G04 | Sequence | 627 | 002394 (6) | ref|XP_009792005.1| | 3e-45 | PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris] | |||||
| JMFS143D07 | Sequence | 616 | 002394 (6) | ref|XP_009792005.1| | 5e-46 | PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris] | |||||
| JMSF041B19 | Sequence | 644 | 002394 (6) | ref|XP_009792005.1| | 2e-18 | PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris] | 655 | 007245 (4) | ref|XP_006387666.1| | 2e-43 | hypothetical protein POPTR_0701s00010g [Populus trichocarpa] gb|ERP46580.1| hypo |
| JMSF050I15 | Sequence | 674 | 002394 (6) | ref|XP_009792005.1| | 2e-39 | PREDICTED: potassium transporter 7-like isoform X1 [Nicotiana sylvestris] | 754 | 007245 (4) | ref|XP_009619127.1| | 2e-57 | PREDICTED: potassium transporter 7-like isoform X2 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS055F01+ TCATTTCCATTAACT
____________________________________________________________
consensus TCATTTCCATTAACT
. : . : . : . : . : . :
JMFS055F01+ GGGGCTTTACTAAACATCACACTAAATGTATATAATGGACTTGTCCCCACATCACCAAAG
JMFS143D07+ TGTATATAATGGACTTGTCCCCACATCACCAAAG
JMFS064G04+ TGTATATAATGGACTTGTCCCCACATCACCAAAG
JMSF050I15+ CCCACATCACCAAAG
____________________________________________________________
consensus GGGGCTTTACTAAACATCACACTAAATGTATATAATGGACTTGTCCCCACATCACCAAAG
. : . : . : . : . : . :
JMFS055F01+ ACTGCTCCAAGTGTCTGAATGATCAATATGATTCTCCTGCCTAAAGTAGCATCCTCATAG
JMFS143D07+ ACTGCTCCAAGTGTCTGAATGATCAATATGATTCTCCTGCCTAAAGTAGCATCCTCATAG
JMFS064G04+ ACTGCTCCAAGTGTCTGAATGATCAATATGATTCTCCTGCCTAAAGTAGCATCCTCATAG
JMFS062H11+ CTGCCTAAAGTAGCATCCTCATAG
JMSF050I15+ ACTGCTCCAAGTGTCTGAATGATCAATATGATTCTCCTGCCTAAAGTAGCATCCTCATAG
____________________________________________________________
consensus ACTGCTCCAAGTGTCTGAATGATCAATATGATTCTCCTGCCTAAAGTAGCATCCTCATAG
. : . : . : . : . : . :
JMFS055F01+ TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
JMFS143D07+ TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
JMFS064G04+ TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
JMFS062H11+ TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
JMSF050I15+ TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
JMSF041B19+ GAAAGAATCAATCNGAGGA
____________________________________________________________
consensus TAATTCTTATGAGCACCGGGAACTTCGAGAGCTTCGACGTCGAAAGAATCAATCCGAGGA
. : . : . : . : . : . :
JMFS055F01+ CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
JMFS143D07+ CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
JMFS064G04+ CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
JMFS062H11+ CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
JMSF050I15+ CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
JMSF041B19+ CCAGTCNGAATCAGCCGNTGCTNGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGN
____________________________________________________________
consensus CCAGTCCGAATCAGCCGCTGCTCGGCGTTGTCCTCCTCGTCGGAGTCAATACCGTTCAGC
. : . : . : . : . : . :
JMFS055F01+ TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
JMFS143D07+ TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
JMFS064G04+ TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
JMFS062H11+ TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
JMSF050I15+ TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
JMSF041B19+ TGCAGNGAATCATNGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
____________________________________________________________
consensus TGCAGCGAATCATCGACGCTTTCGCCGGTATCAGTGCCGTCATTATCCATCTCCGATCCC
. : . : . : . : . : . :
JMFS055F01+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
JMFS143D07+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
JMFS064G04+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
JMFS062H11+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
JMSF050I15+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
JMSF041B19+ TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
____________________________________________________________
consensus TCCTCGTCCTGAAACACCCAACGCGACTCGATCGAATCCATCGACGCCAACCGTCCACCA
. : . : . : . : . : . :
JMFS055F01+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
JMFS143D07+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
JMFS064G04+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
JMFS062H11+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
JMSF050I15+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
JMSF041B19+ TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
____________________________________________________________
consensus TTCTCCCTCTCCGATCCCTCCTCCGCCATCTCCTCTGAAACTTCACTTCTTTCTCTTCGT
. : . : . : . : . : . :
JMFS055F01+ CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
JMFS143D07+ CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
JMFS064G04+ CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
JMFS062H11+ CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
JMSF050I15+ CACTTACCTC-AAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
JMSF041B19+ CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
____________________________________________________________
consensus CACTTACCTCAAAACCTGCGCCATTCGCATACGAATCAATATGTACATGTACTGAATCGT
. : . : . : . : . : . :
JMFS055F01+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
JMFS143D07+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
JMFS064G04+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
JMFS062H11+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
JMSF050I15+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
JMSF041B19+ GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
____________________________________________________________
consensus GCTAGAAAGCCTGAACCCTAGAATTTAGACGGATTTCACCGATGCTTTGTCGGAACGTTT
. : . : . : . : . : . :
JMFS055F01+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
JMFS143D07+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
JMFS064G04+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
JMFS062H11+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
JMSF050I15+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
JMSF041B19+ TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
____________________________________________________________
consensus TGCTTTGCAGCTGTGAATGAATAGATCAGTCTGAACTGTTTTTCCGGTGTCGTAAACTGT
. : . : . : . : . : . :
JMFS055F01+ TACT
JMFS143D07+ TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAG
JMFS064G04+ TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAGGGAACAGTATACATCG
JMFS062H11+ TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAGGGAACAGTATACATCGGACCTTC
JMSF050I15+ TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAGGGAACAGTATACATCGGACCTTC
JMSF041B19+ TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAGGGAACAGTATACATCGGACCTTC
____________________________________________________________
consensus TACTTAGCAACTGCGCCATTGGAGTAAATGTTACAAGGGAACAGTATACATCGGACCTTC
. : . : . : . : . : . :
JMFS062H11+ CGATTCAGAAAATTTGTCATTTCTCAGTGCTCACCATTGACGTATTGACTCTATCA
JMSF050I15+ CGATTCAGAAAATTTGTCATTTCTCAGTGCTCACCATTGACGTATTGACTCTATCA
JMSF041B19+ CGATTCAGAAAATTTGTCATTTCTCAGTGCTCACCATTGACGTATTGACTCTATCACGTC
____________________________________________________________
consensus CGATTCAGAAAATTTGTCATTTCTCAGTGCTCACCATTGACGTATTGACTCTATCACGTC