Contig 002391:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040J01-              AAATCTGAGTGAAGGTGAGGACTTTGCAATGTTGCACACAGACAGTACGTAGCATT
                      ____________________________________________________________
consensus                 AAATCTGAGTGAAGGTGAGGACTTTGCAATGTTGCACACAGACAGTACGTAGCATT
 
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rJMSF040J01-          TGACAGCTTGAAAATGCACAGAAAGCTGGAAGGCTCAAAAAAGAAATGACTGTTACTGAA
                      ____________________________________________________________
consensus             TGACAGCTTGAAAATGCACAGAAAGCTGGAAGGCTCAAAAAAGAAATGACTGTTACTGAA
 
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rJMSF040J01-          ACCATAGTACACTATCAGTTAAAATCCAATCTCTTTACAATATTACTCATGTTTTCCTCT
                      ____________________________________________________________
consensus             ACCATAGTACACTATCAGTTAAAATCCAATCTCTTTACAATATTACTCATGTTTTCCTCT
 
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rJMSF040J01-          CAAGGTCCACAGCATATGTGCATGTATTCCCACTTGAAAGACTCAGTATCTATAGTCGTC
                      ____________________________________________________________
consensus             CAAGGTCCACAGCATATGTGCATGTATTCCCACTTGAAAGACTCAGTATCTATAGTCGTC
 
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rJMSF040J01-          GTCATCATAAAACGCATAATTGCTGTTCCTGTACTTCGATTCTCTTTCAGACCTGTGAAT
                      ____________________________________________________________
consensus             GTCATCATAAAACGCATAATTGCTGTTCCTGTACTTCGATTCTCTTTCAGACCTGTGAAT
 
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rJMSF040J01-          TATATCTTCAAATGCTTGGGTTCCATGTTCTTCAATGTATTTCTCGGCTGCAGTTAGAAT
                      ____________________________________________________________
consensus             TATATCTTCAAATGCTTGGGTTCCATGTTCTTCAATGTATTTCTCGGCTGCAGTTAGAAT
 
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rJMSF040J01-          GTCATCAGGTTTACTGGAAAAATCCTTCTTTCGGGGCACATACCAGATGTTCACTACTTC
                      ____________________________________________________________
consensus             GTCATCAGGTTTACTGGAAAAATCCTTCTTTCGGGGCACATACCAGATGTTCACTACTTC
 
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rJMSF040J01-          TCCTTTAACAATGTATGGCCTAACATAGTGCTCGTAGACATATGCAGCCCCGCTAAAGTA
JMSF039J06+                               TAACATAGTGCTCGTAGACATATGCAGCCCCGCTAAAGTA
JMSF040J01+                     ATGTATGGCCTAACATAGTGCTCGTAGACATATGCAGCCCCGCTAAAGTA
                      ____________________________________________________________
consensus             TCCTTTAACAATGTATGGCCTAACATAGTGCTCGTAGACATATGCAGCCCCGCTAAAGTA
 
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rJMSF040J01-          AGGTATGACCAACCAGCAGGTAGCCATCAGTTTCGCATATGACCAGATCGGGAACCACTC
JMSF039J06+           AGGTATGACCAACCAGCAGGTAGCCATCAGTTTCGCATATGACCAGATCGGGAACCACTC
JMSF040J01+           AGGTATGACCAACCAGCAGGTAGCCATCAGTTTCGCATATGACCAGATCGGGAACCACTC
                      ____________________________________________________________
consensus             AGGTATGACCAACCAGCAGGTAGCCATCAGTTTCGCATATGACCAGATCGGGAACCACTC
 
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rJMSF040J01-          AAGAACTTTCGCGAATGTAAGTTCAAAAAGCGTAATCATAGAGTACAGAACCCAGTAGGT
JMSF039J06+           AAGAACTTTCGCGAATGTAAGTTCAAAAAGCGTAATCATAGAGTACAGAACCCAGTAGGT
JMSF040J01+           AAGAACTTTCGCGAATGTAAGTTCAAAAAGCGTAATCATAGAGTACAGAACCCAGTAGGT
                      ____________________________________________________________
consensus             AAGAACTTTCGCGAATGTAAGTTCAAAAAGCGTAATCATAGAGTACAGAACCCAGTAGGT
 
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rJMSF040J01-          AAGCCATTGCTGATCATCCACAGGATTTTTGGTCTCAATAGCCCTGATTGAAGCATATAG
JMSF039J06+           AAGCCATTGCTGATCATCCACAGGATTTTTGGTCTCAATAGCCCTGATTGAAGCATATAG
JMSF040J01+           AAGCCATTGCTGATCATCCACAGGATTTTTGGTCTCAATAGCCCTGATTGAAGCATATAG
                      ____________________________________________________________
consensus             AAGCCATTGCTGATCATCCACAGGATTTTTGGTCTCAATAGCCCTGATTGAAGCATATAG
 
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rJMSF040J01-          AGGATAAACCAGACTGACCACAGGCCTGCAATATCAAAGGTAAGGGAAGTAATCAGTAAA
JMSF039J06+           AGGATAAACCAGACTGACCACAGGCCTGCAATATCAAAGGTAAGGGAAGTAATCAGTAAA
JMSF040J01+           AGGATAAACCAGACTGACCACAGGCCTGCAATATCAAAGGTAAGGGAAGTAATCAGTAAA
                      ____________________________________________________________
consensus             AGGATAAACCAGACTGACCACAGGCCTGCAATATCAAAGGTAAGGGAAGTAATCAGTAAA
 
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rJMSF040J01-          CCCAAATGAATAAATCCTTTACTGCGCAGTAATTTCTATTGCAATTTTTACTTCAAACAA
JMSF039J06+           CCCAAATGAATAAATCCTTTACTGCGCAGTAATTTCTATTGCAATTTTTACTTCAAACAA
JMSF040J01+           CCCAAATGAATAAATCCTTTACTGCGCAGTAATTTCTATTGCAATTTTTACTTCAAACAA
                      ____________________________________________________________
consensus             CCCAAATGAATAAATCCTTTACTGCGCAGTAATTTCTATTGCAATTTTTACTTCAAACAA
 
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rJMSF040J01-          AAAATCTAACTTTGTCCATGAAAATTGTCAAATTCATAAGAAATGAAAA           
JMSF039J06+           AAAATCTAACTTTGTCCATG-AAATTGTCAAATTCATAAGAAATGAAAAGGGTAAATCAC
JMSF040J01+           AAAATCTAACTTTGTCCATG-AAATTGTCAAATTCATAAGAAATGAAAAGGGTAAATCAC
                      ____________________________________________________________
consensus             AAAATCTAACTTTGTCCATG-AAATTGTCAAATTCATAAGAAATGAAAAGGGTAAATCAC
 
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JMSF039J06+           AGAATAATAGAGAGACCCACCCAGCAAGAACATCGAAGTTCTGAATGAGCACTTTGATTA
JMSF040J01+           AGAATAATAGAGAGACCCACCCAGCAAGAACATCGAAGTTCTGAATGAGCACTTTGATTA
                      ____________________________________________________________
consensus             AGAATAATAGAGAGACCCACCCAGCAAGAACATCGAAGTTCTGAATGAGCACTTTGATTA
 
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JMSF039J06+           GGCTACCAATTCCTCCGGATCCCATTTCTAATCTTTGAAGAGGCAACGAGATTTATTATG
JMSF040J01+           GGCTACCAATTCCTCCGGATCCCATTTCTAATCTTTGAAGAGGCAACGAGATTTATTATG
                      ____________________________________________________________
consensus             GGCTACCAATTCCTCCGGATCCCATTTCTAATCTTTGAAGAGGCAACGAGATTTATTATG
 
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JMSF039J06+           ACTGGTATGTGTTTGTGTGCGCTGAGATTTTGCAGTGGGCAAAAGACTGCTGAGACGAAT
JMSF040J01+           ACTGGTATGTGTTTGTGTGCGCTGAGATTTTGCAGTGGGCAAAAGACTGCTGAGACGAAT
                      ____________________________________________________________
consensus             ACTGGTATGTGTTTGTGTGCGCTGAGATTTTGCAGTGGGCAAAAGACTGCTGAGACGAAT
 
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JMSF039J06+           GATGGGCTTTTGGATCTTAAGAATCTGGTGAGAGAGGTTTCTTCCCGTTCACTCAGTCCT
JMSF040J01+           GATGGGCTTTTGGATCTTAAGAATCTGGTGAGAGAGGTTTCTTCCCGTTCACTCAGTCCT
                      ____________________________________________________________
consensus             GATGGGCTTTTGGATCTTAAGAATCTGGTGAGAGAGGTTTCTTCCCGTTCACTCAGTCCT
 
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JMSF039J06+           CACAGAGAAGCAAAGTTTATGCTATTGCGAACCCCGTAAGAGACAAACGATTAG      
JMSF040J01+           CACAGAGAAGCAAAGTTTATGCTATTGCGAACCCCGTAAGAGACAAACGATTAGTGCGCC
                      ____________________________________________________________
consensus             CACAGAGAAGCAAAGTTTATGCTATTGCGAACCCCGTAAGAGACAAACGATTAGTGCGCC