Contig 002387:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF039D16+                                                        TTTTTTTTTTATTAT
                      ____________________________________________________________
consensus                                                          TTTTTTTTTTATTAT
 
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rJMSF039D16-                                                    TATATATATATTTGGACA
JMSF039D16+           AAAGAGCTTCATATATTTCTAATATGATTACACTTTTATACATATATATATATTTGGACA
                      ____________________________________________________________
consensus             AAAGAGCTTCATATATTTCTAATATGATTACACTTTTATACATATATATATATTTGGACA
 
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rJMSF039D16-          TATATTTTGAACATAAAATTTTTACTCTTTTATCACAAAATCATAACCTTCTGATCTTAC
JMFN029I06+                                          ATCACAAAATCATAACCTTCTGATCTTAC
JMSF039D16+           TATATTTTGAACATAAAATTTTTACTCTTTTATCACAAAATCATAACCTTCTGATCTTAC
                      ____________________________________________________________
consensus             TATATTTTGAACATAAAATTTTTACTCTTTTATCACAAAATCATAACCTTCTGATCTTAC
 
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rJMSF039D16-          AATTCACAAGTAGTTCAAGAACTTTAGATCTTACTATACTTTTGATATTGTTATAATCGA
JMFN029I06+           AATTCACAAGTAGTTCAAGAACTTTAGATCTTACTATACTTTTGATATTGTTATAATCGA
JMSF039D16+           AATTCACAAGTAGTTCAAGAACTTTAGATCTTACTATACTTTTGATATTGTTATAATCGA
                      ____________________________________________________________
consensus             AATTCACAAGTAGTTCAAGAACTTTAGATCTTACTATACTTTTGATATTGTTATAATCGA
 
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rJMSF039D16-          TTTTTATGTATATATATATAAAGTCCTAAATAATTCAGGGTTTAGGCTTGTTCTTCTGGG
JMFN029I06+           TTTTTATGTATATATATATAAAGTCCTAAATAATTCAGGGTTTAGGCTTGTTCTTCTGGG
JMSF039D16+           TTTTTATGTATATATATATAAAGTCCTAAATAATTCAGGGTTTAGGCTTGTTCTTCTGGG
                      ____________________________________________________________
consensus             TTTTTATGTATATATATATAAAGTCCTAAATAATTCAGGGTTTAGGCTTGTTCTTCTGGG
 
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rJMSF039D16-          TGTAGATATAGTCCAAGTGAGCTTCTGCAACCATCCTTCTATTGAAACAAGCTTCATCGT
JMFN029I06+           TGTAGATATAGTCCAAGTGAGCTTCTGCAACCATCCTTCTATTGAAACAAGCTTCATCGT
JMSF039D16+           TGTAGATATAGTCCAAGTGAGCTTCTGCAACCATCCTTCTATTGAAACAAGCTTCATCGT
                      ____________________________________________________________
consensus             TGTAGATATAGTCCAAGTGAGCTTCTGCAACCATCCTTCTATTGAAACAAGCTTCATCGT
 
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rJMSF039D16-          TTTCCTTGCATTCTTCCAAACCCATCAGAGTGGCCATGTCTTCTTCTTCTTCTTGTGGGT
JMFN029I06+           TTTCCTTGCATTCTTCCAAACCCATCAGAGTGGCCATGTCTTCTTCTTCTTCTTGTGGGT
JMSF039D16+           TTTCCTTGCATTCTTCCAAACCCATCAGAGTGGCCATGTCTTCTTCTTCTTCTTGTGGGT
JMSF040D16+                                                             TCTTGTGGGN
                      ____________________________________________________________
consensus             TTTCCTTGCATTCTTCCAAACCCATCAGAGTGGCCATGTCTTCTTCTTCTTCTTGTGGGT
 
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rJMSF039D16-          TCAAGGTTGGAGTTGCATGACCCATCTCACCTGCTACCTCTGTTATCTTCTCATCTTGAG
JMFN029I06+           TCAAGGTTGGAGTTGCATGACCCATCTCACCTGCTACCTCTGTTATCTTCTCATCTTGAG
JMSF039D16+           TCAAGGTTGGAGTTGCATGACCCATCTCACCTGCTACCTCTGTTATCTTCTCATCTTGAG
JMSF040D16+           TCAAGGTCGGAGTTGCATGACCCATCTCACCTGCTACCTCTGTNATNTTCTCATCTTGAG
                      ____________________________________________________________
consensus             TCAAGGTTGGAGTTGCATGACCCATCTCACCTGCTACCTCTGTTATCTTCTCATCTTGAG
 
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rJMSF039D16-          ATTGAGGCAGGCGACGAGCAGATGTTGAGTGCTGAGATGAAATGAGCAGAATTGCTAATA
JMFN029I06+           ATTGAGGCAGGCGACGAGCAGATGTTGAGTGCTGAGATGAAATGAGCAGAATTGCTAATA
JMSF039D16+           ATTGAGGCAGGCGACGAGCAGATGTTGAGTGCTGAGATGAAATGAGCAGAATTGCTAATA
JMSF040D16+           NNTGAGGCAGGCGACGAGCAGATGTTGAGNGCNGAGATGAAATGAGCAGAATTGCTAATA
                      ____________________________________________________________
consensus             ATTGAGGCAGGCGACGAGCAGATGTTGAGTGCTGAGATGAAATGAGCAGAATTGCTAATA
 
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rJMSF039D16-          GAGAACACAGGAAAATAAGAGAAATTTTCTTCATTTCTTTCTTCTTTCTTTTCTCTTCTT
JMFN029I06+           GAGAACACAGGAAAATAAGAGAAATTTTCTTCATTTCTTTCTTCTTTCTTTTCTCTTCTT
JMSF039D16+           GAGAACACAGGAAAATAAGAGAAATTTTCTTCATTTCTTTCTTCTTTCTTTTCTCTTCTT
JMSF040D16+           GAGAACACAGGAAAATAAGAGAAATNTTNTTCATNTCTTTCTTCTTTCTTTTCTCTTCTT
                      ____________________________________________________________
consensus             GAGAACACAGGAAAATAAGAGAAATTTTCTTCATTTCTTTCTTCTTTCTTTTCTCTTCTT
 
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rJMSF039D16-          TTCTTAGCTTGGAGAGAGAGAGATGGAGAGAGAGGGGTATATGAAGGTTTACTGATCTCA
JMFN029I06+           TTCTTAGCTTGGAGAGAGAGAGATGGAGAGAGAGGGGTATATGAAG              
JMSF039D16+           TTCTTAGCTTGGAGAGAGAGAGATGGAGAGAGAGGGGTATATGAAGGTTTACTGATCTCA
JMSF040D16+           TTCTTAGCTGGGANAGAGAGAGATGGAGAGAGAGGGGTATANGAAGGTTTACTGATCTCA
                      ____________________________________________________________
consensus             TTCTTAGCTTGGAGAGAGAGAGATGGAGAGAGAGGGGTATATGAAGGTTTACTGATCTCA