Contig 002386:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS059D11Sequence642002386 (2)ref|XP_008238539.1|86.3PREDICTED: uncharacterized protein LOC103337164 [Prunus mume]
JMSF040D08Sequence452002386 (2)861020485gb|ACB45081.1|9e-32putative polyprotein [Solanum habrochaites]

Alignment

This contig is upended


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JMFS059D11+            GCGCAGGAACGCAAAGGAAGCCAGTGGCAATTGCGACCCACCTTCTGTATTTCAATTGA
                      ____________________________________________________________
consensus              GCGCAGGAACGCAAAGGAAGCCAGTGGCAATTGCGACCCACCTTCTGTATTTCAATTGA
 
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JMFS059D11+           AATTGTGGGGCAGGAGGAAGAGCAACCCACTGATTGGTTAGCGGATTACAGACATAATAG
                      ____________________________________________________________
consensus             AATTGTGGGGCAGGAGGAAGAGCAACCCACTGATTGGTTAGCGGATTACAGACATAATAG
 
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JMFS059D11+           AATATGGTTTGGGACATGGGGCAGGTGGAGGTCCGGGTGGAGCATAGAATTAAATCAGCA
                      ____________________________________________________________
consensus             AATATGGTTTGGGACATGGGGCAGGTGGAGGTCCGGGTGGAGCATAGAATTAAATCAGCA
 
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JMFS059D11+           CACGAACCCACCACTCTAATGCTGCTTTGGGGACAGGGAAGGAAACTTAAATCGAGTCTG
JMSF040D08+                                       GGGGACAGGGAAGGAAACTTAAATCGAGTCTG
                      ____________________________________________________________
consensus             CACGAACCCACCACTCTAATGCTGCTTTGGGGACAGGGAAGGAAACTTAAATCGAGTCTG
 
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JMFS059D11+           TGAAAGCCGCCGCCGCGAACCAACAAACCGCAGTCATGTGCAGTTTGGAATATAAAGCAG
JMSF040D08+           TGAAAGCCGCCGCCGNGAACCAACAANCCGCAGTCATGTGCAGTTTGGAATATAAAGCAG
                      ____________________________________________________________
consensus             TGAAAGCCGCCGCCGCGAACCAACAAACCGCAGTCATGTGCAGTTTGGAATATAAAGCAG
 
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JMFS059D11+           CCAGACGAAGATGAGGGATGAGGAATTGGCGGAAGGGATGGGTCATGGCGTCGGTGATGG
JMSF040D08+           CCAGACGAAGATGAGGGATGAGGAATTGGCGGAAGGGATGGGTCATGGCGTCGGTGATGG
                      ____________________________________________________________
consensus             CCAGACGAAGATGAGGGATGAGGAATTGGCGGAAGGGATGGGTCATGGCGTCGGTGATGG
 
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JMFS059D11+           AAAAAAGTAATGAAATACTGAGAAGAGATAAGAGAACACCAGCTCTTGCATACCAATTTC
JMSF040D08+           AAAAAAGTAATGAAATANTGAGAAGAGATANGAGAACACCAGCTCTTGCATNCCAATTTC
                      ____________________________________________________________
consensus             AAAAAAGTAATGAAATACTGAGAAGAGATAAGAGAACACCAGCTCTTGCATACCAATTTC
 
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JMFS059D11+           A                                                           
JMSF040D08+           AATTCAATAACTGCTCTGTTGGGAAGCCTGCCCAGGATTTCAACTAACAAACCCTCGCCC
                      ____________________________________________________________
consensus             AATTCAATAACTGCTCTGTTGGGAAGCCTGCCCAGGATTTCAACTAACAAACCCTCGCCC
 
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JMSF040D08+           AGATTACTGAAGAAATCGGAGGAATGTGATAATTTCATCAACTTCGCGTCCTCACGCCGA
                      ____________________________________________________________
consensus             AGATTACTGAAGAAATCGGAGGAATGTGATAATTTCATCAACTTCGCGTCCTCACGCCGA
 
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JMSF040D08+           TCCATGCCCCTGCGTACGATCTGTGATACCAATTCTCCCAAAACCTTGCAAACCAATCGC
                      ____________________________________________________________
consensus             TCCATGCCCCTGCGTACGATCTGTGATACCAATTCTCCCAAAACCTTGCAAACCAATCGC
 
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JMSF040D08+           ACTTTACCTATCAATTTGGTGAGAGTTTCAGAGACAATATTCACTTCACCTATCCATCCC
                      ____________________________________________________________
consensus             ACTTTACCTATCAATTTGGTGAGAGTTTCAGAGACAATATTCACTTCACCTATCCATCCC